RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 OTPQ5XKR4 325 aa20.08■□□□□ 0.81
USP47-205ENST00000525257 ERICH5Q6P6B1 374 aa20.08■□□□□ 0.81
USP47-205ENST00000525257 OAFQ86UD1 273 aa20.08■□□□□ 0.81
USP47-205ENST00000525257 ATG16L2Q8NAA4 619 aa20.08■□□□□ 0.81
USP47-205ENST00000525257 OR13C2Q8NGS9 318 aa20.08■□□□□ 0.81
USP47-205ENST00000525257 ZNF420Q8TAQ5 688 aaPredicted RBP20.08■□□□□ 0.81
USP47-205ENST00000525257 GCM1Q9NP62 436 aa20.08■□□□□ 0.81
USP47-205ENST00000525257 TUBG2Q9NRH3 451 aa20.08■□□□□ 0.81
USP47-205ENST00000525257 INTS9Q9NV88 658 aaKnown RBP20.08■□□□□ 0.81
USP47-205ENST00000525257 RHCGQ9UBD6 479 aa20.08■□□□□ 0.81
USP47-205ENST00000525257 TRAV40A0A0B4J280 105 aa20.07■□□□□ 0.8
USP47-205ENST00000525257 A0A0G2JND7 137 aa20.07■□□□□ 0.8
USP47-205ENST00000525257 MDFIC2A0A1B0GVS7 189 aa20.07■□□□□ 0.8
USP47-205ENST00000525257 HTR3EA5X5Y0 456 aa20.07■□□□□ 0.8
USP47-205ENST00000525257 EFCAB9A8MZ26 197 aa20.07■□□□□ 0.8
USP47-205ENST00000525257 OMGP23515 440 aa20.07■□□□□ 0.8
USP47-205ENST00000525257 YAP1P46937 504 aaKnown RBP20.07■□□□□ 0.8
USP47-205ENST00000525257 GUCY1A3Q02108 690 aa20.07■□□□□ 0.8
USP47-205ENST00000525257 PAX2Q02962 417 aa20.07■□□□□ 0.8
USP47-205ENST00000525257 BTNL3Q6UXE8 466 aa20.07■□□□□ 0.8
USP47-205ENST00000525257 C9orf139Q6ZV77 190 aa20.07■□□□□ 0.8
USP47-205ENST00000525257 SPATC1Q76KD6 591 aa20.07■□□□□ 0.8
USP47-205ENST00000525257 OR10AD1Q8NGE0 317 aa20.07■□□□□ 0.8
USP47-205ENST00000525257 C10orf82Q8WW14 230 aa20.07■□□□□ 0.8
USP47-205ENST00000525257 ZNF583Q96ND8 569 aa20.07■□□□□ 0.8
USP47-205ENST00000525257 WACQ9BTA9 647 aa20.07■□□□□ 0.8
USP47-205ENST00000525257 SLITRK2Q9H156 845 aa20.07■□□□□ 0.8
USP47-205ENST00000525257 IL20RAQ9UHF4 553 aa20.07■□□□□ 0.8
USP47-205ENST00000525257 ADAM18Q9Y3Q7 739 aa20.07■□□□□ 0.8
USP47-205ENST00000525257 CYB5R3P00387 301 aaPredicted RBP20.06■□□□□ 0.8
USP47-205ENST00000525257 IFNA8P32881 189 aa20.06■□□□□ 0.8
USP47-205ENST00000525257 MIDNQ504T8 468 aa20.06■□□□□ 0.8
USP47-205ENST00000525257 LRRN1Q6UXK5 716 aa20.06■□□□□ 0.8
USP47-205ENST00000525257 KLBQ86Z14 1044 aa20.06■□□□□ 0.8
USP47-205ENST00000525257 PTP4A1Q93096 173 aa20.06■□□□□ 0.8
USP47-205ENST00000525257 TMIGD2Q96BF3 282 aa20.06■□□□□ 0.8
USP47-205ENST00000525257 UPRTQ96BW1 309 aa20.06■□□□□ 0.8
USP47-205ENST00000525257 COG8Q96MW5 612 aa20.06■□□□□ 0.8
USP47-205ENST00000525257 GRHPRQ9UBQ7 328 aa20.06■□□□□ 0.8
USP47-205ENST00000525257 IGHV2-70DA0A0C4DH43 119 aa20.05■□□□□ 0.8
USP47-205ENST00000525257 PLATP00750 562 aa20.05■□□□□ 0.8
USP47-205ENST00000525257 PPIAL4GP0DN37 164 aa20.05■□□□□ 0.8
USP47-205ENST00000525257 KDELR2P33947 212 aa20.05■□□□□ 0.8
USP47-205ENST00000525257 RPL4P36578 427 aaKnown RBP20.05■□□□□ 0.8
USP47-205ENST00000525257 GNB2P62879 340 aa20.05■□□□□ 0.8
USP47-205ENST00000525257 PRKCDQ05655 676 aa20.05■□□□□ 0.8
USP47-205ENST00000525257 HLXQ14774 488 aaPredicted RBP20.05■□□□□ 0.8
USP47-205ENST00000525257 MESTQ5EB52 335 aa20.05■□□□□ 0.8
USP47-205ENST00000525257 MEGF10Q96KG7 1140 aa20.05■□□□□ 0.8
USP47-205ENST00000525257 MAGEB18Q96M61 343 aa20.05■□□□□ 0.8
USP47-205ENST00000525257 Q96M85 177 aa20.05■□□□□ 0.8
USP47-205ENST00000525257 TMEM165Q9HC07 324 aa20.05■□□□□ 0.8
USP47-205ENST00000525257 PTTG3PQ9NZH4 202 aa20.05■□□□□ 0.8
USP47-205ENST00000525257 IGHV3-64DA0A0J9YX35 117 aa20.04■□□□□ 0.8
USP47-205ENST00000525257 J3KTA2 159 aa20.04■□□□□ 0.8
USP47-205ENST00000525257 IFNL4K9M1U5 179 aa20.04■□□□□ 0.8
USP47-205ENST00000525257 XKRYO14609 159 aa20.04■□□□□ 0.8
USP47-205ENST00000525257 MRASO14807 208 aa20.04■□□□□ 0.8
USP47-205ENST00000525257 RAC2P15153 192 aa20.04■□□□□ 0.8
USP47-205ENST00000525257 CTLA4P16410 223 aa20.04■□□□□ 0.8
USP47-205ENST00000525257 AQP6Q13520 282 aa20.04■□□□□ 0.8
USP47-205ENST00000525257 ANKDD1AQ495B1 522 aa20.04■□□□□ 0.8
USP47-205ENST00000525257 OR2T2Q6IF00 324 aa20.04■□□□□ 0.8
USP47-205ENST00000525257 C16orf87Q6PH81 154 aa20.04■□□□□ 0.8
USP47-205ENST00000525257 OFCC1Q8IZS5 231 aa20.04■□□□□ 0.8
USP47-205ENST00000525257 POU5F2Q8N7G0 328 aa20.04■□□□□ 0.8
USP47-205ENST00000525257 RAB40AQ8WXH6 277 aa20.04■□□□□ 0.8
USP47-205ENST00000525257 FNDC11Q9BVV2 318 aa20.04■□□□□ 0.8
USP47-205ENST00000525257 RERGLQ9H628 205 aa20.04■□□□□ 0.8
USP47-205ENST00000525257 ASH2LQ9UBL3 628 aa20.04■□□□□ 0.8
USP47-205ENST00000525257 SNX13Q9Y5W8 968 aa20.04■□□□□ 0.8
USP47-205ENST00000525257 NOTCH1P46531 2555 aa20.04■□□□□ 0.8
USP47-205ENST00000525257 FAM220BPB1ANY3 271 aa20.03■□□□□ 0.8
USP47-205ENST00000525257 H0YL77 283 aa20.03■□□□□ 0.8
USP47-205ENST00000525257 HOXA3O43365 443 aaPredicted RBP20.03■□□□□ 0.8
USP47-205ENST00000525257 DBHP09172 617 aa20.03■□□□□ 0.8
USP47-205ENST00000525257 GPR4P46093 362 aa20.03■□□□□ 0.8
USP47-205ENST00000525257 SLC9A3P48764 834 aa20.03■□□□□ 0.8
USP47-205ENST00000525257 SELENOWP63302 87 aa20.03■□□□□ 0.8
USP47-205ENST00000525257 TRAM2Q15035 370 aa20.03■□□□□ 0.8
USP47-205ENST00000525257 METTL21CQ5VZV1 264 aa20.03■□□□□ 0.8
USP47-205ENST00000525257 SLC27A4Q6P1M0 643 aa20.03■□□□□ 0.8
USP47-205ENST00000525257 NEIL1Q96FI4 390 aaPredicted RBP20.03■□□□□ 0.8
USP47-205ENST00000525257 ZNF570Q96NI8 536 aa20.03■□□□□ 0.8
USP47-205ENST00000525257 TMEM246Q9BRR3 403 aa20.03■□□□□ 0.8
USP47-205ENST00000525257 MIOXQ9UGB7 285 aa20.03■□□□□ 0.8
USP47-205ENST00000525257 PRKDCP78527 4128 aaKnown RBP20.03■□□□□ 0.8
USP47-205ENST00000525257 DOCK11Q5JSL3 2073 aa20.03■□□□□ 0.8
USP47-205ENST00000525257 TEX13CA0A0J9YWL9 993 aa20.02■□□□□ 0.8
USP47-205ENST00000525257 PRSS37A4D1T9 235 aa20.02■□□□□ 0.8
USP47-205ENST00000525257 OR6C6A6NF89 314 aa20.02■□□□□ 0.8
USP47-205ENST00000525257 EDF1O60869 148 aaKnown RBP20.02■□□□□ 0.8
USP47-205ENST00000525257 CD14P08571 375 aa20.02■□□□□ 0.8
USP47-205ENST00000525257 BRD3OSQ6XYD6 125 aa20.02■□□□□ 0.8
USP47-205ENST00000525257 VTCN1Q7Z7D3 282 aa20.02■□□□□ 0.8
USP47-205ENST00000525257 MOGAT3Q86VF5 341 aa20.02■□□□□ 0.8
USP47-205ENST00000525257 OR2T12Q8NG77 320 aa20.02■□□□□ 0.8
USP47-205ENST00000525257 OR8G5Q8NG78 346 aa20.02■□□□□ 0.8
USP47-205ENST00000525257 OR1F12Q8NHA8 337 aa20.02■□□□□ 0.8
USP47-205ENST00000525257 DACT3Q96B18 629 aaPredicted RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms