RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 CHST11Q9NPF2 352 aa7.99□□□□□ -1.13
PKP3-202ENST00000524646 ALKBH4Q9NXW9 302 aa7.99□□□□□ -1.13
PKP3-202ENST00000524646 SLC2A8Q9NY64 477 aa7.99□□□□□ -1.13
PKP3-202ENST00000524646 SEMA5BQ9P283 1151 aa7.99□□□□□ -1.13
PKP3-202ENST00000524646 KLHL13Q9P2N7 655 aa7.99□□□□□ -1.13
PKP3-202ENST00000524646 DUX4Q9UBX2 424 aa7.99□□□□□ -1.13
PKP3-202ENST00000524646 COA3Q9Y2R0 106 aaPredicted RBP7.99□□□□□ -1.13
PKP3-202ENST00000524646 EMC9Q9Y3B6 208 aa7.99□□□□□ -1.13
PKP3-202ENST00000524646 KCNMB2Q9Y691 235 aa7.99□□□□□ -1.13
PKP3-202ENST00000524646 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 A0A1W2PNV4 684 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 ZNF736B4DX44 427 aaPredicted RBP7.98□□□□□ -1.13
PKP3-202ENST00000524646 KRBOX1C9JBD0 128 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 M0QYG6 137 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 SOX1O00570 391 aaPredicted RBP7.98□□□□□ -1.13
PKP3-202ENST00000524646 ALOX12BO75342 701 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 PIAS2O75928 621 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 SCGNO76038 276 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 BPNT1O95861 308 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 IL11P20809 199 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 HSD11B1P28845 292 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 CD34P28906 385 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 MPGP29372 298 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 AGTR1P30556 359 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 TAGLNQ01995 201 aaKnown RBP7.98□□□□□ -1.13
PKP3-202ENST00000524646 OC90Q02509 493 aaPredicted RBP7.98□□□□□ -1.13
PKP3-202ENST00000524646 FMODQ06828 376 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 SPOCK1Q08629 439 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 ZNF345Q14585 488 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 COL19A1Q14993 1142 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 VWA2Q5GFL6 755 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 RAB12Q6IQ22 244 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 ALKAL2Q6UX46 152 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 LANCL3Q6ZV70 420 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 COX15Q7KZN9 410 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 DCXRQ7Z4W1 244 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 GLRX5Q86SX6 157 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 LYPD6Q86Y78 171 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 PLXDC1Q8IUK5 500 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 PRSS58Q8IYP2 241 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 ZDHHC22Q8N966 263 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 PLPP5Q8NEB5 264 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 MFSD8Q8NHS3 518 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 COQ8AQ8NI60 647 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 RNF133Q8WVZ7 376 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 AQP3Q92482 292 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 PPP1R14AQ96A00 147 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 FAM46BQ96A09 425 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 LINC00052Q96N35 136 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 KCNK17Q96T54 332 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 NKX3-1Q99801 234 aaPredicted RBP7.98□□□□□ -1.13
PKP3-202ENST00000524646 PRRT1Q99946 306 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 NUDT16L1Q9BRJ7 211 aaKnown RBP7.98□□□□□ -1.13
PKP3-202ENST00000524646 MFFQ9GZY8 342 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 MOB1AQ9H8S9 216 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 GDF2Q9UK05 429 aaPredicted RBP7.98□□□□□ -1.13
PKP3-202ENST00000524646 SRPK3Q9UPE1 567 aa7.98□□□□□ -1.13
PKP3-202ENST00000524646 TNRC6BQ9UPQ9 1833 aaKnown RBP7.98□□□□□ -1.13
PKP3-202ENST00000524646 A0A0D9SG52 128 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 TMEM235A6NFC5 223 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 TMEM200CA6NKL6 621 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 POM121CA8CG34 1229 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 A8MXK9 166 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 P2RY10O00398 339 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 BET1O15155 118 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 ZNF208O43345 1280 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 BCL2L11O43521 198 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 SDC3O75056 442 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 MPZL1O95297 269 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 IL2RAP01589 272 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 FCER2P06734 321 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 FGF2P09038 288 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 H2BFMP0C1H6 154 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 MGMTP16455 207 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 BDKRB2P30411 391 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 HOXD11P31277 338 aaPredicted RBP7.97□□□□□ -1.13
PKP3-202ENST00000524646 OR1D5P58170 312 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 RNF4P78317 190 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 HSF1Q00613 529 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 FGL1Q08830 312 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 FOXF1Q12946 379 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 DHRS2Q13268 280 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 NR0B2Q15466 257 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 OR7A5Q15622 319 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 MOGAT2Q3SYC2 334 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 RNASE10Q5GAN6 216 aaKnown RBP7.97□□□□□ -1.13
PKP3-202ENST00000524646 C1orf189Q5VU69 101 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 ZNF660Q6AZW8 331 aaPredicted RBP7.97□□□□□ -1.13
PKP3-202ENST00000524646 H1FNTQ75WM6 255 aaPredicted RBP7.97□□□□□ -1.13
PKP3-202ENST00000524646 TMED4Q7Z7H5 227 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 FJX1Q86VR8 437 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 LINC00346Q8IVM7 164 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 PDZD9Q8IXQ8 264 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 BPIFB2Q8N4F0 458 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 DEFB119Q8N690 84 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.97□□□□□ -1.13
PKP3-202ENST00000524646 ACBD4Q8NC06 268 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 ZNF248Q8NDW4 579 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 ADPRHL1Q8NDY3 354 aa7.97□□□□□ -1.13
PKP3-202ENST00000524646 OR10H5Q8NGA6 315 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms