RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 TIMM10BQ9Y5J6 103 aa11.31□□□□□ -0.6
NKX3-1-202ENST00000523261 ELOVL7A1L3X0 281 aa11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 COPEO14579 308 aa11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 ADAM20O43506 726 aa11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 TRMUO75648 421 aaKnown RBP11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 IRF2P14316 349 aa11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 RAC2P15153 192 aa11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 LAP3P28838 519 aa11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 ALDH3A1P30838 453 aa11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 GATA4P43694 442 aa11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 CLNS1AP54105 237 aaKnown RBP11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 CDH12P55289 794 aa11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 GUCA2AQ02747 115 aa11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 HABP2Q14520 560 aaPredicted RBP11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 OR1Q1Q15612 314 aa11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 ZNF74Q16587 644 aa11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 CLEC12AQ5QGZ9 265 aa11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 BEND2Q8NDZ0 799 aa11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 Q8TCH9 128 aa11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 NPFFR1Q9GZQ6 430 aa11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 PCDHAC1Q9H158 963 aa11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 AKTIPQ9H8T0 292 aa11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 ZNF702PQ9H963 129 aa11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 BCL2L10Q9HD36 194 aa11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 SIRT7Q9NRC8 400 aa11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 C20orf141Q9NUB4 165 aa11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 NDRG4Q9ULP0 352 aaKnown RBP11.3□□□□□ -0.6
NKX3-1-202ENST00000523261 A0A1W2PRX2 142 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 MEIOCA2RUB1 952 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 CHST1O43916 411 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 TPST2O60704 377 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 FAM20BO75063 409 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 ZFPL1O95159 310 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 ECDO95905 644 aaPredicted RBP11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 CST2P09228 141 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 ACADSP16219 412 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 ZNF26P17031 533 aaPredicted RBP11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 LMO1P25800 156 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 PRKAR1BP31321 381 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 DLX1P56177 255 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 FMODQ06828 376 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 KLRD1Q13241 179 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 C11orf91Q3C1V1 193 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 NXNQ6DKJ4 435 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 OR2T2Q6IF00 324 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 PNKDQ8N490 385 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 DTX3Q8N9I9 347 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 SLC7A13Q8TCU3 470 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 ASB10Q8WXI3 467 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 IFT81Q8WYA0 676 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 SSX3Q99909 188 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 MEAF6Q9HAF1 191 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 SMURF2Q9HAU4 748 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 TMEM27Q9HBJ8 222 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 RAB18Q9NP72 206 aa11.29□□□□□ -0.6
NKX3-1-202ENST00000523261 A0A1B0GWJ7 208 aa11.28□□□□□ -0.6
NKX3-1-202ENST00000523261 LGALS8O00214 317 aa11.28□□□□□ -0.6
NKX3-1-202ENST00000523261 RIPK2O43353 540 aa11.28□□□□□ -0.6
NKX3-1-202ENST00000523261 CH25HO95992 272 aa11.28□□□□□ -0.6
NKX3-1-202ENST00000523261 PF4V1P10720 104 aa11.28□□□□□ -0.6
NKX3-1-202ENST00000523261 LYL1P12980 280 aa11.28□□□□□ -0.6
NKX3-1-202ENST00000523261 FAHP16930 419 aa11.28□□□□□ -0.6
NKX3-1-202ENST00000523261 PCBD1P61457 104 aa11.28□□□□□ -0.6
NKX3-1-202ENST00000523261 KCNJ8Q15842 424 aa11.28□□□□□ -0.6
NKX3-1-202ENST00000523261 SWT1Q5T5J6 900 aaKnown RBP11.28□□□□□ -0.6
NKX3-1-202ENST00000523261 SFRP4Q6FHJ7 346 aaPredicted RBP11.28□□□□□ -0.6
NKX3-1-202ENST00000523261 LINC00114Q6XXX2 140 aa11.28□□□□□ -0.6
NKX3-1-202ENST00000523261 Q8N2B8 174 aa11.28□□□□□ -0.6
NKX3-1-202ENST00000523261 OR11L1Q8NGX0 322 aa11.28□□□□□ -0.6
NKX3-1-202ENST00000523261 NSMAFQ92636 917 aa11.28□□□□□ -0.6
NKX3-1-202ENST00000523261 PPP1R36Q96LQ0 422 aa11.28□□□□□ -0.6
NKX3-1-202ENST00000523261 ZIM3Q96PE6 472 aa11.28□□□□□ -0.6
NKX3-1-202ENST00000523261 OR52E6Q96RD3 313 aa11.28□□□□□ -0.6
NKX3-1-202ENST00000523261 WNT10AQ9GZT5 417 aa11.28□□□□□ -0.6
NKX3-1-202ENST00000523261 FAM234AQ9H0X4 552 aa11.28□□□□□ -0.6
NKX3-1-202ENST00000523261 NANSQ9NR45 359 aa11.28□□□□□ -0.6
NKX3-1-202ENST00000523261 INPP5EQ9NRR6 644 aa11.28□□□□□ -0.6
NKX3-1-202ENST00000523261 SLC17A7Q9P2U7 560 aa11.28□□□□□ -0.6
NKX3-1-202ENST00000523261 ONECUT1Q9UBC0 465 aa11.28□□□□□ -0.6
NKX3-1-202ENST00000523261 TMEM247A6NEH6 219 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 MCIDASD6RGH6 385 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 FBP2O00757 339 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 DVL1O14640 695 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 ANGPTL7O43827 346 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 TPST1O60507 370 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 PF4P02776 101 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 COX5BP10606 129 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 IL12AP29459 219 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 RAD23AP54725 363 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 NCALDP61601 193 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 MAB21L1Q13394 359 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 ENDOGQ14249 297 aaKnown RBP11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 DHRS4L2Q6PKH6 230 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 SLC25A47Q6Q0C1 308 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 FBXW12Q6X9E4 464 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 RANBP3LQ86VV4 465 aaPredicted RBP11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 CLDN22Q8N7P3 220 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 LY6G5BQ8NDX9 201 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 BBS10Q8TAM1 723 aa11.27□□□□□ -0.61
NKX3-1-202ENST00000523261 RORBQ92753 470 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms