RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 HCN3Q9P1Z3 774 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 OR14J1Q9UGF5 321 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 FKBPLQ9UIM3 349 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 KLK13Q9UKR3 277 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 HHLA2Q9UM44 414 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 PDE10AQ9Y233 779 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 TMED3Q9Y3Q3 217 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 ANKRD36A6QL64 1941 aa6.79□□□□□ -1.32
HDAC3-216ENST00000523088 ANKRD11Q6UB99 2663 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-216ENST00000523088 WDFY3Q8IZQ1 3526 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 IGHV2-70DA0A0C4DH43 119 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 A0A0D9SEW6 157 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 C13orf42A0A1B0GVH6 325 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 A0A1W2PQJ5 194 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 IGSF23A1L1A6 192 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 NKX2-6A6NCS4 301 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 SDR42E2A6NKP2 422 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 B4DXG7 233 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 PPP5D1E7EU14 171 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 UBFD1O14562 309 aaKnown RBP6.78□□□□□ -1.32
HDAC3-216ENST00000523088 CCL25O15444 150 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 TEX33O43247 280 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 BNIP3LO60238 219 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 SH3BGRLO75368 114 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 STK16O75716 305 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 RGS11O94810 467 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 GPR75O95800 540 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 ACTL6AO96019 429 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 TFP02787 698 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 ALDOCP09972 364 aaKnown RBP6.78□□□□□ -1.32
HDAC3-216ENST00000523088 CD79AP11912 226 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 ZNF28P17035 718 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 MPZP25189 248 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 SRD5A2P31213 254 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 BRS3P32247 399 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 CDKN1AP38936 164 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 RFX2P48378 723 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 DUSP3P51452 185 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-216ENST00000523088 OR2B8PP59922 312 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 CKS1BP61024 79 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 SRSF1Q07955 248 aaKnown RBP eCLIP6.78□□□□□ -1.32
HDAC3-216ENST00000523088 TRAF3Q13114 568 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 MTM1Q13496 603 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 HIF1AQ16665 826 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 CDO1Q16878 200 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 GLYR1Q49A26 553 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-216ENST00000523088 CYBRD1Q53TN4 286 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 CARD16Q5EG05 197 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 SAMD4BQ5PRF9 694 aaKnown RBP6.78□□□□□ -1.32
HDAC3-216ENST00000523088 XAF1Q6GPH4 301 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 RHBDD2Q6NTF9 364 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 MON1BQ7L1V2 547 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 PROSER1Q86XN7 944 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 FAM129CQ86XR2 697 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 LAX1Q8IWV1 398 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 TMEM251Q8N6I4 163 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 OR4D9Q8NGE8 314 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 OR14L1PQ8NHC6 308 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 ALG3Q92685 438 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 SLCO4A1Q96BD0 722 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 ITCHQ96J02 903 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 TECTBQ96PL2 329 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 H2AFJQ9BTM1 129 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 ACSS3Q9H6R3 686 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 WDR76Q9H967 626 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 C3orf14Q9HBI5 128 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-216ENST00000523088 ZNF358Q9NW07 568 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 CD84Q9UIB8 345 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 ING1Q9UK53 422 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-216ENST00000523088 ICAM5Q9UMF0 924 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 TFR2Q9UP52 801 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 APC2O95996 2303 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 FRYQ5TBA9 3013 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 MYLKQ15746 1914 aa6.78□□□□□ -1.32
HDAC3-216ENST00000523088 LOC100509620A0A075B734 347 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 OR6C6A6NF89 314 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 RNF212BA8MTL3 300 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 A8MZ25 164 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 H0Y980 276 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 CLDN34H7C241 214 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 M0QXV9 152 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 XRCC2O43543 280 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 LDB2O43679 373 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 PDE6DO43924 150 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 MPC2O95563 127 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 MPIG6BO95866 241 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 HPRT1P00492 218 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 CEACAM5P06731 702 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 LPLP06858 475 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 SERPINE2P07093 398 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 SNRPCP09234 159 aaKnown RBP6.77□□□□□ -1.33
HDAC3-216ENST00000523088 ZSCAN5DPP0CG00 497 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 CHRNB2P17787 502 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 HTR2CP28335 458 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 CRISP1P54107 249 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 WDR4P57081 412 aaKnown RBP6.77□□□□□ -1.33
HDAC3-216ENST00000523088 ERVPABLB-1P60509 514 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 RAP2BP61225 183 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 NCS1P62166 190 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms