RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 USB1Q9BQ65 265 aaKnown RBP10.38□□□□□ -0.75
PVT1-215ENST00000522963 WACQ9BTA9 647 aa10.38□□□□□ -0.75
PVT1-215ENST00000522963 OR2H1Q9GZK4 316 aa10.38□□□□□ -0.75
PVT1-215ENST00000522963 WNT5BQ9H1J7 359 aa10.38□□□□□ -0.75
PVT1-215ENST00000522963 HEATR1Q9H583 2144 aaKnown RBP10.38□□□□□ -0.75
PVT1-215ENST00000522963 RNF121Q9H920 327 aa10.38□□□□□ -0.75
PVT1-215ENST00000522963 FGF20Q9NP95 211 aaPredicted RBP10.38□□□□□ -0.75
PVT1-215ENST00000522963 CCNB1IP1Q9NPC3 277 aa10.38□□□□□ -0.75
PVT1-215ENST00000522963 OBP2BQ9NPH6 170 aa10.38□□□□□ -0.75
PVT1-215ENST00000522963 PAK1IP1Q9NWT1 392 aaPredicted RBP10.38□□□□□ -0.75
PVT1-215ENST00000522963 SCN3BQ9NY72 215 aa10.38□□□□□ -0.75
PVT1-215ENST00000522963 CNOT2Q9NZN8 540 aaKnown RBP10.38□□□□□ -0.75
PVT1-215ENST00000522963 MYRFQ9Y2G1 1151 aa10.38□□□□□ -0.75
PVT1-215ENST00000522963 TIMM10BQ9Y5J6 103 aa10.38□□□□□ -0.75
PVT1-215ENST00000522963 A0A1W2PQL4 384 aaPredicted RBP10.37□□□□□ -0.75
PVT1-215ENST00000522963 PRR32B1ATL7 298 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 PTGES3LE9PB15 166 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 TMCC2O75069 709 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 FADS2O95864 444 aaKnown RBP10.37□□□□□ -0.75
PVT1-215ENST00000522963 IGHA1P01876 353 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 OR2T7P0C7T2 308 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 CBR1P16152 277 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 ALOX5APP20292 161 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 ARR3P36575 388 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 SLC35A2P78381 396 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 MVKQ03426 396 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 SCRN3Q0VDG4 424 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 ST3GAL4Q11206 333 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 PPA1Q15181 289 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 GSG1Q2KHT4 349 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 PABPC1L2AQ5JQF8 200 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 ZNF774Q6NX45 483 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 TMEM53Q6P2H8 277 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 SSX6Q7RTT6 188 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 ZNF454Q8N9F8 522 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 GJC3Q8NFK1 279 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 OR2T27Q8NH04 317 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 ST7LQ8TDW4 575 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 THEM6Q8WUY1 208 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 HSD17B8Q92506 261 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 MUCL1Q96DR8 90 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 TMEM80Q96HE8 168 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 ZNF75AQ96N20 296 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 MNTQ99583 582 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 COPS4Q9BT78 406 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 ABHD6Q9BV23 337 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 C1QTNF6Q9BXI9 259 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 YTHDF1Q9BYJ9 559 aaKnown RBP10.37□□□□□ -0.75
PVT1-215ENST00000522963 TTTY10Q9BZA0 68 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 LIME1Q9H400 295 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 C1orf198Q9H425 327 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 DUSP21Q9H596 190 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 PNRC2Q9NPJ4 139 aaKnown RBP10.37□□□□□ -0.75
PVT1-215ENST00000522963 LAMP5Q9UJQ1 280 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 TPRKBQ9Y3C4 175 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 PCDHGB1Q9Y5G3 927 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 CADP27708 2225 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 ADGRG4Q8IZF6 3080 aa10.37□□□□□ -0.75
PVT1-215ENST00000522963 IRGMA1A4Y4 181 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 DEFB108AA8MXU0 73 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 ZNF670-ZNF695F2Z2N8 137 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 SIAH2O43255 324 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 SGCEO43556 437 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 RAB36O95755 333 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 CDK1P06493 297 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 LYNP07948 512 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 DCKP27707 260 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 CHN2P52757 468 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 ZNF85Q03923 595 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 RAB39AQ14964 217 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 BEX5Q5H9J7 111 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 ELFN2Q5R3F8 820 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 SEZ6L2Q6UXD5 910 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 SPATC1Q76KD6 591 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 VASH1Q7L8A9 365 aaPredicted RBP10.36□□□□□ -0.75
PVT1-215ENST00000522963 CDH24Q86UP0 819 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 ZNF584Q8IVC4 421 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 STX19Q8N4C7 294 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 ACBD7Q8N6N7 88 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 IPCEF1Q8WWN9 437 aaPredicted RBP10.36□□□□□ -0.75
PVT1-215ENST00000522963 SLAMF6Q96DU3 332 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 PLPPR2Q96GM1 343 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 ZNF649Q9BS31 505 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 JAM3Q9BX67 310 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 PLEK2Q9NYT0 353 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 NPAP1Q9NZP6 1156 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 ERVK-18Q9QC07 812 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 CRNNQ9UBG3 495 aaPredicted RBP10.36□□□□□ -0.75
PVT1-215ENST00000522963 BLOC1S6Q9UL45 172 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 DIMT1Q9UNQ2 313 aaKnown RBP10.36□□□□□ -0.75
PVT1-215ENST00000522963 TMEM14AQ9Y6G1 99 aa10.36□□□□□ -0.75
PVT1-215ENST00000522963 ANKRD17O75179 2603 aaKnown RBP10.36□□□□□ -0.75
PVT1-215ENST00000522963 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.35□□□□□ -0.75
PVT1-215ENST00000522963 DAPL1A0PJW8 107 aa10.35□□□□□ -0.75
PVT1-215ENST00000522963 FAM221AA4D161 298 aa10.35□□□□□ -0.75
PVT1-215ENST00000522963 OR6C6A6NF89 314 aa10.35□□□□□ -0.75
PVT1-215ENST00000522963 PSMD9O00233 223 aa10.35□□□□□ -0.75
PVT1-215ENST00000522963 MAGEB4O15481 346 aaPredicted RBP10.35□□□□□ -0.75
PVT1-215ENST00000522963 SYNGR3O43761 229 aa10.35□□□□□ -0.75
PVT1-215ENST00000522963 DOK2O60496 412 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms