RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 SSPNQ14714 243 aa14.77□□□□□ -0.04
PCDHA3-201ENST00000522353 TMEM92Q6UXU6 159 aa14.77□□□□□ -0.04
PCDHA3-201ENST00000522353 LHFPL2Q6ZUX7 228 aa14.77□□□□□ -0.04
PCDHA3-201ENST00000522353 SLC25A21Q9BQT8 299 aaPredicted RBP14.77□□□□□ -0.04
PCDHA3-201ENST00000522353 OPA3Q9H6K4 179 aa14.77□□□□□ -0.04
PCDHA3-201ENST00000522353 PAPPAQ13219 1627 aa14.77□□□□□ -0.05
PCDHA3-201ENST00000522353 SCAF4O95104 1147 aaKnown RBP14.77□□□□□ -0.05
PCDHA3-201ENST00000522353 OR1M1Q8NGA1 313 aa14.77□□□□□ -0.05
PCDHA3-201ENST00000522353 OR4D9Q8NGE8 314 aa14.77□□□□□ -0.05
PCDHA3-201ENST00000522353 MED29Q9NX70 200 aa14.77□□□□□ -0.05
PCDHA3-201ENST00000522353 TSPAN12O95859 305 aa14.77□□□□□ -0.05
PCDHA3-201ENST00000522353 JUNBP17275 347 aaPredicted RBP14.77□□□□□ -0.05
PCDHA3-201ENST00000522353 POU3F3P20264 500 aaPredicted RBP14.77□□□□□ -0.05
PCDHA3-201ENST00000522353 SRP9P49458 86 aaKnown RBP14.77□□□□□ -0.05
PCDHA3-201ENST00000522353 TFF2Q03403 129 aa14.77□□□□□ -0.05
PCDHA3-201ENST00000522353 FOXF1Q12946 379 aa14.77□□□□□ -0.05
PCDHA3-201ENST00000522353 FAM109BQ6ICB4 259 aaPredicted RBP14.77□□□□□ -0.05
PCDHA3-201ENST00000522353 PLXDC2Q6UX71 529 aa14.77□□□□□ -0.05
PCDHA3-201ENST00000522353 FAM26EQ8N5C1 309 aa14.77□□□□□ -0.05
PCDHA3-201ENST00000522353 CFHR5Q9BXR6 569 aa14.77□□□□□ -0.05
PCDHA3-201ENST00000522353 SAV1Q9H4B6 383 aaPredicted RBP14.77□□□□□ -0.05
PCDHA3-201ENST00000522353 ERVMER34-1Q9H9K5 563 aa14.77□□□□□ -0.05
PCDHA3-201ENST00000522353 TJP1Q07157 1748 aa14.77□□□□□ -0.05
PCDHA3-201ENST00000522353 RGS7BPQ6MZT1 257 aaPredicted RBP14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 JMJD6Q6NYC1 403 aaPredicted RBP14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 ANKRD16Q6P6B7 361 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 ASB1Q9Y576 335 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 ANKRD61A6NGH8 418 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 BHLHE40O14503 412 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 FBXO24O75426 580 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 NRASP01111 189 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 FAM157BP0CG42 384 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 PTBP1P26599 531 aaKnown RBP eCLIP14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 APEX1P27695 318 aaKnown RBP14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 MC2RQ01718 297 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 BCDIN3DQ7Z5W3 292 aaKnown RBP14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 FAM185AQ8N0U4 392 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 OR10X1Q8NGY0 326 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 SEH1LQ96EE3 360 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 S1PR3Q99500 378 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 PDCD1LG2Q9BQ51 273 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 ZCCHC4Q9H5U6 513 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 F6UZH7 168 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 ANXA7P20073 488 aaKnown RBP14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 ARL16Q0P5N6 197 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 CST9LP1Q5W188 147 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 Q7L0L9 218 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 HRH4Q9H3N8 390 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 A0A1B0GUL6 1792 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 CSF3P09919 207 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 FABP6P51161 128 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 INSM1Q01101 510 aaPredicted RBP14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 BAXQ07812 192 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 HES3Q5TGS1 186 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 GALNT9Q9HCQ5 603 aa14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 CGGBP1Q9UFW8 167 aaPredicted RBP14.76□□□□□ -0.05
PCDHA3-201ENST00000522353 METAP1P53582 386 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 B4GALNT1Q00973 533 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 POU4F3Q15319 338 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 ZNF74Q16587 644 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 TMEM211Q6ICI0 200 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 CORO2AQ92828 525 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 NPAP1Q9NZP6 1156 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 A0A0A6YYD5 115 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 TOX3O15405 576 aaPredicted RBP14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 CLEC3BP05452 202 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 TAF1P21675 1872 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 OMGP23515 440 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 PRPH2P23942 346 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 SSTR2P30874 369 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 EGR3Q06889 387 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 OVCH1Q7RTY7 1134 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 SLCO4A1Q96BD0 722 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 MRGPRX3Q96LB0 322 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 HINT3Q9NQE9 182 aaKnown RBP14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 FBXL4Q9UKA2 621 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 PPM1DO15297 605 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 TCRBP04435 133 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 PRSS36Q5K4E3 855 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 ADGRF3Q8IZF5 1079 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 NANOGP1Q8N7R0 232 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 ACOXLQ9NUZ1 547 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 MEIKINA0A087WXM9 373 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 TNFRSF1AP19438 455 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 BEX5Q5H9J7 111 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 KCNIP4Q6PIL6 250 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 CORO6Q6QEF8 472 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 MDGA2Q7Z553 956 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 ROBO4Q8WZ75 1007 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 LRP5O75197 1615 aa14.75□□□□□ -0.05
PCDHA3-201ENST00000522353 HOXD12P35452 270 aa14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 H2BFWTQ7Z2G1 175 aa14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 FBXL14Q8N1E6 418 aa14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 OR2AE1Q8NHA4 323 aa14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 C5orf67F2Z3F1 127 aa14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 ETHE1O95571 254 aa14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 CCR9P51686 369 aa14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 TLE4Q04727 773 aa14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 SYS1Q8N2H4 156 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms