RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 MEP1BQ16820 701 aa17.55■□□□□ 0.4
SDCBP-209ENST00000522243 CCDC92Q53HC0 331 aaPredicted RBP17.55■□□□□ 0.4
SDCBP-209ENST00000522243 ACSM5Q6NUN0 579 aa17.55■□□□□ 0.4
SDCBP-209ENST00000522243 SMARCD3Q6STE5 483 aa17.55■□□□□ 0.4
SDCBP-209ENST00000522243 PGAM4Q8N0Y7 254 aa17.55■□□□□ 0.4
SDCBP-209ENST00000522243 RAB39BQ96DA2 213 aa17.55■□□□□ 0.4
SDCBP-209ENST00000522243 CMBLQ96DG6 245 aa17.55■□□□□ 0.4
SDCBP-209ENST00000522243 CDRT15Q96T59 188 aa17.55■□□□□ 0.4
SDCBP-209ENST00000522243 OCEL1Q9H607 264 aa17.55■□□□□ 0.4
SDCBP-209ENST00000522243 ARL8BQ9NVJ2 186 aa17.55■□□□□ 0.4
SDCBP-209ENST00000522243 DCAF16Q9NXF7 216 aa17.55■□□□□ 0.4
SDCBP-209ENST00000522243 MAGEL2Q9UJ55 1249 aa17.55■□□□□ 0.4
SDCBP-209ENST00000522243 PURGQ9UJV8 347 aaKnown RBP17.55■□□□□ 0.4
SDCBP-209ENST00000522243 ZDHHC8Q9ULC8 765 aa17.55■□□□□ 0.4
SDCBP-209ENST00000522243 POLR1DQ9Y2S0 133 aa17.55■□□□□ 0.4
SDCBP-209ENST00000522243 TRAV20A0A0B4J274 112 aa17.54■□□□□ 0.4
SDCBP-209ENST00000522243 ISPDA4D126 451 aa17.54■□□□□ 0.4
SDCBP-209ENST00000522243 DCTN6O00399 190 aa17.54■□□□□ 0.4
SDCBP-209ENST00000522243 RER1O15258 196 aa17.54■□□□□ 0.4
SDCBP-209ENST00000522243 PLPP2O43688 288 aa17.54■□□□□ 0.4
SDCBP-209ENST00000522243 IGHV2-5P01817 119 aa17.54■□□□□ 0.4
SDCBP-209ENST00000522243 ADH4P08319 380 aa17.54■□□□□ 0.4
SDCBP-209ENST00000522243 DBHP09172 617 aa17.54■□□□□ 0.4
SDCBP-209ENST00000522243 HSD17B1P14061 328 aa17.54■□□□□ 0.4
SDCBP-209ENST00000522243 ANPEPP15144 967 aa17.54■□□□□ 0.4
SDCBP-209ENST00000522243 LSM6P62312 80 aaKnown RBP17.54■□□□□ 0.4
SDCBP-209ENST00000522243 GNGT1P63211 74 aa17.54■□□□□ 0.4
SDCBP-209ENST00000522243 SHQ1Q6PI26 577 aaKnown RBP17.54■□□□□ 0.4
SDCBP-209ENST00000522243 ADCK1Q86TW2 530 aa17.54■□□□□ 0.4
SDCBP-209ENST00000522243 NPEPL1Q8NDH3 523 aa17.54■□□□□ 0.4
SDCBP-209ENST00000522243 OR1F12Q8NHA8 337 aa17.54■□□□□ 0.4
SDCBP-209ENST00000522243 FANK1Q8TC84 345 aa17.54■□□□□ 0.4
SDCBP-209ENST00000522243 NSMCE2Q96MF7 247 aa17.54■□□□□ 0.4
SDCBP-209ENST00000522243 OR52D1Q9H346 318 aa17.54■□□□□ 0.4
SDCBP-209ENST00000522243 CGGBP1Q9UFW8 167 aaPredicted RBP17.54■□□□□ 0.4
SDCBP-209ENST00000522243 CD300AQ9UGN4 299 aa17.54■□□□□ 0.4
SDCBP-209ENST00000522243 DYSFO75923 2080 aa17.54■□□□□ 0.4
SDCBP-209ENST00000522243 MXRA5Q9NR99 2828 aa17.53■□□□□ 0.4
SDCBP-209ENST00000522243 ARPC2O15144 300 aa17.53■□□□□ 0.4
SDCBP-209ENST00000522243 OR10H3O60404 316 aa17.53■□□□□ 0.4
SDCBP-209ENST00000522243 TXNDC12O95881 172 aa17.53■□□□□ 0.4
SDCBP-209ENST00000522243 ERFP50548 548 aa17.53■□□□□ 0.4
SDCBP-209ENST00000522243 SMIM11AP58511 58 aa17.53■□□□□ 0.4
SDCBP-209ENST00000522243 ZMAT1Q5H9K5 638 aa17.53■□□□□ 0.4
SDCBP-209ENST00000522243 SAMD4BQ5PRF9 694 aaKnown RBP17.53■□□□□ 0.4
SDCBP-209ENST00000522243 LEG1Q6P5S2 330 aa17.53■□□□□ 0.4
SDCBP-209ENST00000522243 MCUR1Q96AQ8 359 aa17.53■□□□□ 0.4
SDCBP-209ENST00000522243 DCLRE1CQ96SD1 692 aaKnown RBP17.53■□□□□ 0.4
SDCBP-209ENST00000522243 DIRC2Q96SL1 478 aa17.53■□□□□ 0.4
SDCBP-209ENST00000522243 GAL3ST1Q99999 423 aa17.53■□□□□ 0.4
SDCBP-209ENST00000522243 SRA1Q9HD15 236 aaKnown RBP17.53■□□□□ 0.4
SDCBP-209ENST00000522243 UBAP1Q9NZ09 502 aa17.53■□□□□ 0.4
SDCBP-209ENST00000522243 TAGLN3Q9UI15 199 aa17.53■□□□□ 0.4
SDCBP-209ENST00000522243 SVEP1Q4LDE5 3571 aa17.52■□□□□ 0.4
SDCBP-209ENST00000522243 PNPP00491 289 aa17.52■□□□□ 0.4
SDCBP-209ENST00000522243 AVPP01185 164 aa17.52■□□□□ 0.4
SDCBP-209ENST00000522243 FABP3P05413 133 aa17.52■□□□□ 0.4
SDCBP-209ENST00000522243 CD55P08174 381 aa17.52■□□□□ 0.4
SDCBP-209ENST00000522243 RRM2P31350 389 aa17.52■□□□□ 0.4
SDCBP-209ENST00000522243 SLC3A1Q07837 685 aa17.52■□□□□ 0.4
SDCBP-209ENST00000522243 CDK5R2Q13319 367 aa17.52■□□□□ 0.4
SDCBP-209ENST00000522243 RFX4Q33E94 735 aa17.52■□□□□ 0.4
SDCBP-209ENST00000522243 Q6ZR03 302 aa17.52■□□□□ 0.4
SDCBP-209ENST00000522243 C1orf229Q6ZS94 237 aaPredicted RBP17.52■□□□□ 0.4
SDCBP-209ENST00000522243 OR5AS1Q8N127 324 aa17.52■□□□□ 0.4
SDCBP-209ENST00000522243 OR2Z1Q8NG97 314 aa17.52■□□□□ 0.4
SDCBP-209ENST00000522243 OR4K13Q8NH42 304 aa17.52■□□□□ 0.4
SDCBP-209ENST00000522243 SAMD8Q96LT4 415 aa17.52■□□□□ 0.4
SDCBP-209ENST00000522243 NMNAT3Q96T66 252 aa17.52■□□□□ 0.4
SDCBP-209ENST00000522243 G6PC2Q9NQR9 355 aa17.52■□□□□ 0.4
SDCBP-209ENST00000522243 PTTG3PQ9NZH4 202 aa17.52■□□□□ 0.4
SDCBP-209ENST00000522243 B9D1Q9UPM9 204 aa17.52■□□□□ 0.4
SDCBP-209ENST00000522243 LOC105371242A0A075B767 164 aa17.51■□□□□ 0.39
SDCBP-209ENST00000522243 OR6C6A6NF89 314 aa17.51■□□□□ 0.39
SDCBP-209ENST00000522243 RGS9O75916 674 aaPredicted RBP17.51■□□□□ 0.39
SDCBP-209ENST00000522243 KITLGP21583 273 aa17.51■□□□□ 0.39
SDCBP-209ENST00000522243 CRABP1P29762 137 aa17.51■□□□□ 0.39
SDCBP-209ENST00000522243 SLC6A6P31641 620 aa17.51■□□□□ 0.39
SDCBP-209ENST00000522243 MXRA7P84157 204 aa17.51■□□□□ 0.39
SDCBP-209ENST00000522243 KCNMB1Q16558 191 aa17.51■□□□□ 0.39
SDCBP-209ENST00000522243 DNM1P34Q6PK57 102 aa17.51■□□□□ 0.39
SDCBP-209ENST00000522243 CORO6Q6QEF8 472 aa17.51■□□□□ 0.39
SDCBP-209ENST00000522243 JAZF1Q86VZ6 243 aa17.51■□□□□ 0.39
SDCBP-209ENST00000522243 DEFB107AQ8IZN7 70 aa17.51■□□□□ 0.39
SDCBP-209ENST00000522243 HAVCR1Q96D42 359 aa17.51■□□□□ 0.39
SDCBP-209ENST00000522243 IFT27Q9BW83 186 aa17.51■□□□□ 0.39
SDCBP-209ENST00000522243 FN3KQ9H479 309 aa17.51■□□□□ 0.39
SDCBP-209ENST00000522243 ARL2BPQ9Y2Y0 163 aa17.51■□□□□ 0.39
SDCBP-209ENST00000522243 LHFPL6Q9Y693 200 aa17.51■□□□□ 0.39
SDCBP-209ENST00000522243 ARHGAP32A7KAX9 2087 aa17.51■□□□□ 0.39
SDCBP-209ENST00000522243 IGLV1-36A0A0B4J1U3 117 aa17.5■□□□□ 0.39
SDCBP-209ENST00000522243 RENP00797 406 aa17.5■□□□□ 0.39
SDCBP-209ENST00000522243 SBK2P0C263 348 aa17.5■□□□□ 0.39
SDCBP-209ENST00000522243 HIST1H1CP16403 213 aaKnown RBP17.5■□□□□ 0.39
SDCBP-209ENST00000522243 TUBG1P23258 451 aa17.5■□□□□ 0.39
SDCBP-209ENST00000522243 HLXQ14774 488 aaPredicted RBP17.5■□□□□ 0.39
SDCBP-209ENST00000522243 PEG10Q86TG7 708 aaKnown RBP17.5■□□□□ 0.39
SDCBP-209ENST00000522243 OR6V1Q8N148 313 aa17.5■□□□□ 0.39
SDCBP-209ENST00000522243 ITLN1Q8WWA0 313 aa17.5■□□□□ 0.39
SDCBP-209ENST00000522243 PTP4A1Q93096 173 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms