RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 HLA-DQA2P01906 255 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 PRKACGP22612 351 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 PYCR1P32322 319 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 MPV17P39210 176 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 RIPPLY3P57055 190 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 PPP1CBP62140 327 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 HIST1H3AP68431 136 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 CRMP1Q14194 572 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 ZNF718Q3SXZ3 478 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 HIST2H3PS2Q5TEC6 136 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 C1orf146Q5VVC0 180 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 ARL9Q6T311 187 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 HIST2H3AQ71DI3 136 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 PROKR2Q8NFJ6 384 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 GJC3Q8NFK1 279 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 OR2T4Q8NH00 348 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 TEX47Q8TBZ9 253 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 ZNRF4Q8WWF5 429 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 PIMREGQ9BSJ6 248 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 RBM4Q9BWF3 364 aaKnown RBP17.67■□□□□ 0.42
TRIM35-203ENST00000521253 NTN4Q9HB63 628 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 MRPL22Q9NWU5 206 aaKnown RBP17.67■□□□□ 0.42
TRIM35-203ENST00000521253 SLCO1C1Q9NYB5 712 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 GPR160Q9UJ42 338 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 KLHL21Q9UJP4 597 aa17.67■□□□□ 0.42
TRIM35-203ENST00000521253 VWC2LB2RUY7 222 aa17.66■□□□□ 0.42
TRIM35-203ENST00000521253 IGHV3-13P01766 116 aa17.66■□□□□ 0.42
TRIM35-203ENST00000521253 GCH1P30793 250 aa17.66■□□□□ 0.42
TRIM35-203ENST00000521253 ARHGDIAP52565 204 aa17.66■□□□□ 0.42
TRIM35-203ENST00000521253 LOXL1Q08397 574 aaPredicted RBP17.66■□□□□ 0.42
TRIM35-203ENST00000521253 TMEM255AQ5JRV8 349 aa17.66■□□□□ 0.42
TRIM35-203ENST00000521253 MBNL2Q5VZF2 373 aaKnown RBP17.66■□□□□ 0.42
TRIM35-203ENST00000521253 LINC00346Q8IVM7 164 aa17.66■□□□□ 0.42
TRIM35-203ENST00000521253 C1orf174Q8IYL3 243 aa17.66■□□□□ 0.42
TRIM35-203ENST00000521253 IQCF1Q8N6M8 205 aa17.66■□□□□ 0.42
TRIM35-203ENST00000521253 OR51L1Q8NGJ5 315 aa17.66■□□□□ 0.42
TRIM35-203ENST00000521253 OR9Q1Q8NGQ5 310 aa17.66■□□□□ 0.42
TRIM35-203ENST00000521253 KLF14Q8TD94 323 aaPredicted RBP17.66■□□□□ 0.42
TRIM35-203ENST00000521253 IPCEF1Q8WWN9 437 aaPredicted RBP17.66■□□□□ 0.42
TRIM35-203ENST00000521253 UTP4Q969X6 686 aaKnown RBP17.66■□□□□ 0.42
TRIM35-203ENST00000521253 HINT3Q9NQE9 182 aaKnown RBP17.66■□□□□ 0.42
TRIM35-203ENST00000521253 TBCCD1Q9NVR7 557 aa17.66■□□□□ 0.42
TRIM35-203ENST00000521253 ATPIF1Q9UII2 106 aa17.66■□□□□ 0.42
TRIM35-203ENST00000521253 GRIP1Q9Y3R0 1128 aa17.66■□□□□ 0.42
TRIM35-203ENST00000521253 HIVEP2P31629 2446 aa17.66■□□□□ 0.42
TRIM35-203ENST00000521253 DEAF1O75398 565 aaPredicted RBP17.65■□□□□ 0.42
TRIM35-203ENST00000521253 DBHP09172 617 aa17.65■□□□□ 0.42
TRIM35-203ENST00000521253 GGT2P36268 569 aa17.65■□□□□ 0.42
TRIM35-203ENST00000521253 NR4A2P43354 598 aa17.65■□□□□ 0.42
TRIM35-203ENST00000521253 CCNIQ14094 377 aa17.65■□□□□ 0.42
TRIM35-203ENST00000521253 ELFN2Q5R3F8 820 aa17.65■□□□□ 0.42
TRIM35-203ENST00000521253 SLC18B1Q6NT16 456 aa17.65■□□□□ 0.42
TRIM35-203ENST00000521253 CFAP77Q6ZQR2 320 aa17.65■□□□□ 0.42
TRIM35-203ENST00000521253 ZNF786Q8N393 782 aa17.65■□□□□ 0.42
TRIM35-203ENST00000521253 UBASH3BQ8TF42 649 aa17.65■□□□□ 0.42
TRIM35-203ENST00000521253 SNX33Q8WV41 574 aa17.65■□□□□ 0.42
TRIM35-203ENST00000521253 GTF3AQ92664 365 aaKnown RBP17.65■□□□□ 0.42
TRIM35-203ENST00000521253 CDADC1Q9BWV3 514 aa17.65■□□□□ 0.42
TRIM35-203ENST00000521253 NMNAT2Q9BZQ4 307 aa17.65■□□□□ 0.42
TRIM35-203ENST00000521253 HDHD2Q9H0R4 259 aa17.65■□□□□ 0.42
TRIM35-203ENST00000521253 ZNF556Q9HAH1 456 aa17.65■□□□□ 0.42
TRIM35-203ENST00000521253 CMC2Q9NRP2 79 aa17.65■□□□□ 0.42
TRIM35-203ENST00000521253 CYB5R1Q9UHQ9 305 aa17.65■□□□□ 0.42
TRIM35-203ENST00000521253 FN1P02751 2386 aaKnown RBP17.65■□□□□ 0.42
TRIM35-203ENST00000521253 TVP23AA6NH52 213 aa17.64■□□□□ 0.41
TRIM35-203ENST00000521253 RIIAD1A6NNX1 92 aa17.64■□□□□ 0.41
TRIM35-203ENST00000521253 C17orf100A8MU93 164 aa17.64■□□□□ 0.41
TRIM35-203ENST00000521253 LYNX1G3V0Z9 82 aa17.64■□□□□ 0.41
TRIM35-203ENST00000521253 NCR1O76036 304 aa17.64■□□□□ 0.41
TRIM35-203ENST00000521253 IFNGP01579 166 aa17.64■□□□□ 0.41
TRIM35-203ENST00000521253 HPXP02790 462 aa17.64■□□□□ 0.41
TRIM35-203ENST00000521253 GYPBP06028 91 aa17.64■□□□□ 0.41
TRIM35-203ENST00000521253 LYNX1P0DP58 116 aa17.64■□□□□ 0.41
TRIM35-203ENST00000521253 ANXA8P13928 327 aa17.64■□□□□ 0.41
TRIM35-203ENST00000521253 USF1P22415 310 aaPredicted RBP17.64■□□□□ 0.41
TRIM35-203ENST00000521253 POU1F1P28069 291 aa17.64■□□□□ 0.41
TRIM35-203ENST00000521253 GRK5P34947 590 aa17.64■□□□□ 0.41
TRIM35-203ENST00000521253 SLC25A1P53007 311 aa17.64■□□□□ 0.41
TRIM35-203ENST00000521253 MOGQ16653 247 aa17.64■□□□□ 0.41
TRIM35-203ENST00000521253 SHQ1Q6PI26 577 aaKnown RBP17.64■□□□□ 0.41
TRIM35-203ENST00000521253 LYPD4Q6UWN0 246 aa17.64■□□□□ 0.41
TRIM35-203ENST00000521253 ASRGL1Q7L266 308 aa17.64■□□□□ 0.41
TRIM35-203ENST00000521253 ATG16L2Q8NAA4 619 aa17.64■□□□□ 0.41
TRIM35-203ENST00000521253 COQ7Q99807 217 aa17.64■□□□□ 0.41
TRIM35-203ENST00000521253 POFUT1Q9H488 388 aa17.64■□□□□ 0.41
TRIM35-203ENST00000521253 CR1P17927 2039 aa17.64■□□□□ 0.41
TRIM35-203ENST00000521253 ANK3Q12955 4377 aaKnown RBP17.63■□□□□ 0.41
TRIM35-203ENST00000521253 H3BSA7 217 aa17.63■□□□□ 0.41
TRIM35-203ENST00000521253 CLUP10909 449 aa17.63■□□□□ 0.41
TRIM35-203ENST00000521253 OSMP13725 252 aa17.63■□□□□ 0.41
TRIM35-203ENST00000521253 ZNF823P16415 610 aa17.63■□□□□ 0.41
TRIM35-203ENST00000521253 ZNF3P17036 446 aa17.63■□□□□ 0.41
TRIM35-203ENST00000521253 SPI1P17947 270 aa17.63■□□□□ 0.41
TRIM35-203ENST00000521253 GIFP27352 417 aa17.63■□□□□ 0.41
TRIM35-203ENST00000521253 MAGEB1P43366 347 aa17.63■□□□□ 0.41
TRIM35-203ENST00000521253 GINS1Q14691 196 aa17.63■□□□□ 0.41
TRIM35-203ENST00000521253 ACSM5Q6NUN0 579 aa17.63■□□□□ 0.41
TRIM35-203ENST00000521253 SLC27A4Q6P1M0 643 aa17.63■□□□□ 0.41
TRIM35-203ENST00000521253 TMEM154Q6P9G4 183 aa17.63■□□□□ 0.41
TRIM35-203ENST00000521253 CCDC121Q6ZUS5 278 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms