RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 TLCD1Q96CP7 247 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 MUCL1Q96DR8 90 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 ZNF75AQ96N20 296 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 ZNF681Q96N22 645 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 ZNF582Q96NG8 517 aaPredicted RBP3.13□□□□□ -1.91
VPS13B-208ENST00000521037 FMO2Q99518 471 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 GPA33Q99795 319 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 AIF1LQ9BQI0 150 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 BTBD10Q9BSF8 475 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 RAB1BQ9H0U4 201 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 AAMDCQ9H7C9 122 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 TMEM185BQ9H7F4 350 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 ZNF442Q9H7R0 627 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 MAP6D1Q9H9H5 199 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 GPN1Q9HCN4 374 aaPredicted RBP3.13□□□□□ -1.91
VPS13B-208ENST00000521037 PRODH2Q9UF12 536 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 INSIG2Q9Y5U4 225 aa3.13□□□□□ -1.91
VPS13B-208ENST00000521037 TET2Q6N021 2002 aaPredicted RBP3.12□□□□□ -1.91
VPS13B-208ENST00000521037 ZCWPW2A0A1B0GU75 182 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 PRSS51A0A1B0GVH4 220 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 A0A1B0GWJ7 208 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 A0A1W2PP11 408 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 A0A1W2PRB8 838 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 ZNF724A8MTY0 619 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 F8WDY8 70 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 SAP18O00422 153 aaKnown RBP3.12□□□□□ -1.91
VPS13B-208ENST00000521037 SCO2O43819 266 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 GPR137BO60478 399 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 REM1O75628 298 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 AKR7A3O95154 331 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 KRT8P05787 483 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 C8GP07360 202 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 CECR9P0C854 216 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 TCN1P20061 433 aaPredicted RBP3.12□□□□□ -1.91
VPS13B-208ENST00000521037 OGNP20774 298 aaKnown RBP3.12□□□□□ -1.91
VPS13B-208ENST00000521037 RASSF2P50749 326 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 CCNG1P51959 295 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 EFNB2P52799 333 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 EIF3EP60228 445 aaKnown RBP3.12□□□□□ -1.91
VPS13B-208ENST00000521037 RPP38P78345 283 aaKnown RBP3.12□□□□□ -1.91
VPS13B-208ENST00000521037 LCN2P80188 198 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 NAAAQ02083 359 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 PNRC1Q12796 327 aaPredicted RBP3.12□□□□□ -1.91
VPS13B-208ENST00000521037 BIKQ13323 160 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 PDE7AQ13946 482 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 PRPSAP1Q14558 356 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 LTB4RQ15722 352 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 KRT71Q3SY84 523 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 SPRNQ5BIV9 151 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 TCTEX1D4Q5JR98 221 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 LGSNQ5TDP6 509 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 FAM219BQ5XKK7 198 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 HBMQ6B0K9 141 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 CLEC6AQ6EIG7 209 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 ZFAND6Q6FIF0 208 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 RBMS3Q6XE24 437 aaKnown RBP3.12□□□□□ -1.91
VPS13B-208ENST00000521037 TRMT10CQ7L0Y3 403 aaKnown RBP3.12□□□□□ -1.91
VPS13B-208ENST00000521037 FCRLAQ7L513 359 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 LRRC70Q7Z2Q7 622 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 MARCH3Q86UD3 253 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 ZC3HC1Q86WB0 502 aaKnown RBP3.12□□□□□ -1.91
VPS13B-208ENST00000521037 LYG1Q8N1E2 194 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 TMEM86BQ8N661 226 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 C1orf52Q8N6N3 182 aaKnown RBP3.12□□□□□ -1.91
VPS13B-208ENST00000521037 UBL4BQ8N7F7 174 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 NRACQ8N912 160 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 CCDC63Q8NA47 563 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 OR4K17Q8NGC6 315 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 VANGL1Q8TAA9 524 aaPredicted RBP3.12□□□□□ -1.91
VPS13B-208ENST00000521037 CTNNBL1Q8WYA6 563 aaPredicted RBP3.12□□□□□ -1.91
VPS13B-208ENST00000521037 RDH5Q92781 318 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 SLCO4A1Q96BD0 722 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 EFHD2Q96C19 240 aaPredicted RBP3.12□□□□□ -1.91
VPS13B-208ENST00000521037 COQ8BQ96D53 544 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 MTERF3Q96E29 417 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 RNF145Q96MT1 663 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 ZNF317Q96PQ6 595 aaPredicted RBP3.12□□□□□ -1.91
VPS13B-208ENST00000521037 ERP44Q9BS26 406 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 MRPL37Q9BZE1 423 aaKnown RBP3.12□□□□□ -1.91
VPS13B-208ENST00000521037 FAM234AQ9H0X4 552 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 OR51B5Q9H339 312 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 DDX31Q9H8H2 851 aaKnown RBP3.12□□□□□ -1.91
VPS13B-208ENST00000521037 FKRPQ9H9S5 495 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 EDA2RQ9HAV5 297 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 DNAJC4Q9NNZ3 241 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 FANCFQ9NPI8 374 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 FBXO6Q9NRD1 293 aaPredicted RBP3.12□□□□□ -1.91
VPS13B-208ENST00000521037 GPR173Q9NS66 373 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 MED17Q9NVC6 651 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 TMEM45AQ9NWC5 275 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 TXNDC16Q9P2K2 825 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 LAMP5Q9UJQ1 280 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 PURGQ9UJV8 347 aaKnown RBP3.12□□□□□ -1.91
VPS13B-208ENST00000521037 MCTS1Q9ULC4 181 aaKnown RBP3.12□□□□□ -1.91
VPS13B-208ENST00000521037 FOXJ3Q9UPW0 622 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 SIGLEC9Q9Y336 463 aa3.12□□□□□ -1.91
VPS13B-208ENST00000521037 WNK2Q9Y3S1 2297 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 A0A0B4J203 849 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 TRAV24A0A0B4J272 114 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 ZNF816-ZNF321PA0A0X1KG74 233 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms