RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 SAMD8Q96LT4 415 aa12.8□□□□□ -0.36
CSMD1-207ENST00000520451 SYT4Q9H2B2 425 aa12.8□□□□□ -0.36
CSMD1-207ENST00000520451 ANKRD19PQ9H560 264 aa12.8□□□□□ -0.36
CSMD1-207ENST00000520451 ESM1Q9NQ30 184 aa12.8□□□□□ -0.36
CSMD1-207ENST00000520451 ASH2LQ9UBL3 628 aa12.8□□□□□ -0.36
CSMD1-207ENST00000520451 EGFL7Q9UHF1 273 aa12.8□□□□□ -0.36
CSMD1-207ENST00000520451 STARD10Q9Y365 291 aa12.8□□□□□ -0.36
CSMD1-207ENST00000520451 ENPP4Q9Y6X5 453 aa12.8□□□□□ -0.36
CSMD1-207ENST00000520451 ARHGAP32A7KAX9 2087 aa12.79□□□□□ -0.36
CSMD1-207ENST00000520451 PPIAL4EA0A075B759 164 aa12.79□□□□□ -0.36
CSMD1-207ENST00000520451 PPIAL4CA0A0B4J2A2 164 aa12.79□□□□□ -0.36
CSMD1-207ENST00000520451 PPIAL4DF5H284 164 aa12.79□□□□□ -0.36
CSMD1-207ENST00000520451 SLC16A7O60669 478 aa12.79□□□□□ -0.36
CSMD1-207ENST00000520451 KHDRBS3O75525 346 aaKnown RBP12.79□□□□□ -0.36
CSMD1-207ENST00000520451 NDUFB2O95178 105 aa12.79□□□□□ -0.36
CSMD1-207ENST00000520451 PPIAL4FP0DN26 164 aa12.79□□□□□ -0.36
CSMD1-207ENST00000520451 SDHAP31040 664 aa12.79□□□□□ -0.36
CSMD1-207ENST00000520451 GSK3BP49841 420 aa12.79□□□□□ -0.36
CSMD1-207ENST00000520451 ERFP50548 548 aa12.79□□□□□ -0.36
CSMD1-207ENST00000520451 BTG1P62324 171 aa12.79□□□□□ -0.36
CSMD1-207ENST00000520451 ZMYND11Q15326 602 aa12.79□□□□□ -0.36
CSMD1-207ENST00000520451 GPR139Q6DWJ6 353 aa12.79□□□□□ -0.36
CSMD1-207ENST00000520451 GLB1L2Q8IW92 636 aa12.79□□□□□ -0.36
CSMD1-207ENST00000520451 ZDHHC22Q8N966 263 aa12.79□□□□□ -0.36
CSMD1-207ENST00000520451 OR1F12Q8NHA8 337 aa12.79□□□□□ -0.36
CSMD1-207ENST00000520451 SLC7A13Q8TCU3 470 aa12.79□□□□□ -0.36
CSMD1-207ENST00000520451 ZMYND19Q96E35 227 aaPredicted RBP12.79□□□□□ -0.36
CSMD1-207ENST00000520451 COG8Q96MW5 612 aa12.79□□□□□ -0.36
CSMD1-207ENST00000520451 HOPXQ9BPY8 73 aaPredicted RBP12.79□□□□□ -0.36
CSMD1-207ENST00000520451 MMP26Q9NRE1 261 aa12.79□□□□□ -0.36
CSMD1-207ENST00000520451 IL20RAQ9UHF4 553 aa12.79□□□□□ -0.36
CSMD1-207ENST00000520451 PPP1R3CQ9UQK1 317 aa12.79□□□□□ -0.36
CSMD1-207ENST00000520451 COA3Q9Y2R0 106 aaPredicted RBP12.79□□□□□ -0.36
CSMD1-207ENST00000520451 POLR1DQ9Y2S0 133 aa12.79□□□□□ -0.36
CSMD1-207ENST00000520451 OR6C6A6NF89 314 aa12.78□□□□□ -0.36
CSMD1-207ENST00000520451 IMPA2O14732 288 aa12.78□□□□□ -0.36
CSMD1-207ENST00000520451 SURF4O15260 269 aa12.78□□□□□ -0.36
CSMD1-207ENST00000520451 H1F0P07305 194 aaKnown RBP12.78□□□□□ -0.36
CSMD1-207ENST00000520451 NCK1P16333 377 aa12.78□□□□□ -0.36
CSMD1-207ENST00000520451 LSM6P62312 80 aaKnown RBP12.78□□□□□ -0.36
CSMD1-207ENST00000520451 UBA52P62987 128 aaKnown RBP12.78□□□□□ -0.36
CSMD1-207ENST00000520451 TMEM155Q4W5P6 130 aa12.78□□□□□ -0.36
CSMD1-207ENST00000520451 ARMCX4Q5H9R4 360 aa12.78□□□□□ -0.36
CSMD1-207ENST00000520451 FGD3Q5JSP0 725 aa12.78□□□□□ -0.36
CSMD1-207ENST00000520451 TSEN54Q7Z6J9 526 aaKnown RBP12.78□□□□□ -0.36
CSMD1-207ENST00000520451 LRRC28Q86X40 367 aaPredicted RBP12.78□□□□□ -0.36
CSMD1-207ENST00000520451 OR5AS1Q8N127 324 aa12.78□□□□□ -0.36
CSMD1-207ENST00000520451 DEFB108BQ8NET1 73 aa12.78□□□□□ -0.36
CSMD1-207ENST00000520451 DVL3Q92997 716 aaPredicted RBP12.78□□□□□ -0.36
CSMD1-207ENST00000520451 PTP4A1Q93096 173 aa12.78□□□□□ -0.36
CSMD1-207ENST00000520451 HAVCR1Q96D42 359 aa12.78□□□□□ -0.36
CSMD1-207ENST00000520451 RSRC1Q96IZ7 334 aaKnown RBP12.78□□□□□ -0.36
CSMD1-207ENST00000520451 OR2V2Q96R30 315 aa12.78□□□□□ -0.36
CSMD1-207ENST00000520451 KCTD14Q9BQ13 255 aaPredicted RBP12.78□□□□□ -0.36
CSMD1-207ENST00000520451 EFCAB1Q9HAE3 211 aa12.78□□□□□ -0.36
CSMD1-207ENST00000520451 NTN4Q9HB63 628 aa12.78□□□□□ -0.36
CSMD1-207ENST00000520451 PATZ1Q9HBE1 687 aaKnown RBP12.78□□□□□ -0.36
CSMD1-207ENST00000520451 VSX1Q9NZR4 365 aaPredicted RBP12.78□□□□□ -0.36
CSMD1-207ENST00000520451 IL19Q9UHD0 177 aa12.78□□□□□ -0.36
CSMD1-207ENST00000520451 SIGLEC7Q9Y286 467 aa12.78□□□□□ -0.36
CSMD1-207ENST00000520451 FAM32AQ9Y421 112 aaKnown RBP12.78□□□□□ -0.36
CSMD1-207ENST00000520451 PPIAL4AQ9Y536 164 aa12.78□□□□□ -0.36
CSMD1-207ENST00000520451 A0A1W2PRQ8 180 aa12.77□□□□□ -0.37
CSMD1-207ENST00000520451 SOCS2O14508 198 aa12.77□□□□□ -0.37
CSMD1-207ENST00000520451 NDUFAB1O14561 156 aa12.77□□□□□ -0.37
CSMD1-207ENST00000520451 RER1O15258 196 aa12.77□□□□□ -0.37
CSMD1-207ENST00000520451 SPRY1O43609 319 aaPredicted RBP12.77□□□□□ -0.37
CSMD1-207ENST00000520451 CCDC22O60826 627 aa12.77□□□□□ -0.37
CSMD1-207ENST00000520451 PTP4A3O75365 173 aa12.77□□□□□ -0.37
CSMD1-207ENST00000520451 DBHP09172 617 aa12.77□□□□□ -0.37
CSMD1-207ENST00000520451 RAC2P15153 192 aa12.77□□□□□ -0.37
CSMD1-207ENST00000520451 NUDT2P50583 147 aa12.77□□□□□ -0.37
CSMD1-207ENST00000520451 SEC61A1P61619 476 aaKnown RBP12.77□□□□□ -0.37
CSMD1-207ENST00000520451 ZNF154Q13106 437 aa12.77□□□□□ -0.37
CSMD1-207ENST00000520451 DGCR6Q14129 220 aa12.77□□□□□ -0.37
CSMD1-207ENST00000520451 HLXQ14774 488 aaPredicted RBP12.77□□□□□ -0.37
CSMD1-207ENST00000520451 CCDC92Q53HC0 331 aaPredicted RBP12.77□□□□□ -0.37
CSMD1-207ENST00000520451 C8orf82Q6P1X6 216 aaPredicted RBP12.77□□□□□ -0.37
CSMD1-207ENST00000520451 RBMS3Q6XE24 437 aaKnown RBP12.77□□□□□ -0.37
CSMD1-207ENST00000520451 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.77□□□□□ -0.37
CSMD1-207ENST00000520451 ADCK1Q86TW2 530 aa12.77□□□□□ -0.37
CSMD1-207ENST00000520451 ATG16L2Q8NAA4 619 aa12.77□□□□□ -0.37
CSMD1-207ENST00000520451 POP5Q969H6 163 aaKnown RBP12.77□□□□□ -0.37
CSMD1-207ENST00000520451 SIGLEC11Q96RL6 698 aa12.77□□□□□ -0.37
CSMD1-207ENST00000520451 GPX7Q96SL4 187 aaPredicted RBP12.77□□□□□ -0.37
CSMD1-207ENST00000520451 NUAK2Q9H093 628 aa12.77□□□□□ -0.37
CSMD1-207ENST00000520451 CCDC134Q9H6E4 229 aa12.77□□□□□ -0.37
CSMD1-207ENST00000520451 NRIP3Q9NQ35 241 aa12.77□□□□□ -0.37
CSMD1-207ENST00000520451 DDX28Q9NUL7 540 aaKnown RBP12.77□□□□□ -0.37
CSMD1-207ENST00000520451 PTTG3PQ9NZH4 202 aa12.77□□□□□ -0.37
CSMD1-207ENST00000520451 NDUFAF4Q9P032 175 aa12.77□□□□□ -0.37
CSMD1-207ENST00000520451 RPS6KA6Q9UK32 745 aa12.77□□□□□ -0.37
CSMD1-207ENST00000520451 IER3IP1Q9Y5U9 82 aa12.77□□□□□ -0.37
CSMD1-207ENST00000520451 AUP1Q9Y679 476 aa12.77□□□□□ -0.37
CSMD1-207ENST00000520451 DYSFO75923 2080 aa12.77□□□□□ -0.37
CSMD1-207ENST00000520451 F5H0A9 414 aaPredicted RBP12.76□□□□□ -0.37
CSMD1-207ENST00000520451 TRAPPC2LH3BP13 241 aa12.76□□□□□ -0.37
CSMD1-207ENST00000520451 J3QW42 95 aa12.76□□□□□ -0.37
CSMD1-207ENST00000520451 ZNF12P17014 697 aa12.76□□□□□ -0.37
CSMD1-207ENST00000520451 MDH2P40926 338 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms