RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 REEP3Q6NUK4 255 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 MEX3BQ6ZN04 569 aaKnown RBP5.99□□□□□ -1.45
SDCBP-208ENST00000520228 SPATA21Q7Z572 469 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 DHDDSQ86SQ9 333 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 ZNF440Q8IYI8 595 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 GCNT2Q8N0V5 402 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 OR10D3Q8NH80 312 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 OR2V1Q8NHB1 315 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 ZNF563Q8TA94 476 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 FNDC9Q8TBE3 224 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 ZFAND2BQ8WV99 257 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 C10orf82Q8WW14 230 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 ST8SIA1Q92185 356 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 OSTF1Q92882 214 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 ZNF524Q96C55 264 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 ANKRD27Q96NW4 1050 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 CGREF1Q99674 301 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 SFXN3Q9BWM7 321 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 PRRG4Q9BZD6 226 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 FAM107BQ9H098 131 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 DPAGT1Q9H3H5 408 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 IKZF5Q9H5V7 419 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 ARMC7Q9H6L4 198 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 SDF2L1Q9HCN8 221 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 BCL2L10Q9HD36 194 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 TIGARQ9NQ88 270 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 SERINC1Q9NRX5 453 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 ACER3Q9NUN7 267 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 PAQR5Q9NXK6 330 aaPredicted RBP5.99□□□□□ -1.45
SDCBP-208ENST00000520228 MCTS1Q9ULC4 181 aaKnown RBP5.99□□□□□ -1.45
SDCBP-208ENST00000520228 IFT52Q9Y366 437 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 DSPPQ9NZW4 1301 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 A0A0J9YW62 118 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 A0A1W2PNV4 684 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 GMNCA6NCL1 334 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 CFAP73A6NFT4 308 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 BBIP1A8MTZ0 92 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 EEF1E1-BLOC1S5C9J1V9 151 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 FBP2O00757 339 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 TNFSF11O14788 317 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 MRASO14807 208 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 SLC22A2O15244 555 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 EEF1E1O43324 174 aaKnown RBP5.98□□□□□ -1.45
SDCBP-208ENST00000520228 CXCL13O43927 109 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 CCDC22O60826 627 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 NPPAP01160 153 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 CRHP06850 196 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 H1F0P07305 194 aaKnown RBP5.98□□□□□ -1.45
SDCBP-208ENST00000520228 ETS2P15036 469 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 SHC1P29353 583 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 MTPNP58546 118 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 TFF3Q07654 80 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 PLA2G7Q13093 441 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 SELENBP1Q13228 472 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 CAPRIN1Q14444 709 aaKnown RBP5.98□□□□□ -1.45
SDCBP-208ENST00000520228 SNAPC1Q16533 368 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 CYP51A1Q16850 503 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 CTU2Q2VPK5 515 aaKnown RBP5.98□□□□□ -1.45
SDCBP-208ENST00000520228 TRMT5Q32P41 509 aaKnown RBP5.98□□□□□ -1.45
SDCBP-208ENST00000520228 COQ5Q5HYK3 327 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 ZNF311Q5JNZ3 666 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 MRPL2Q5T653 305 aaKnown RBP5.98□□□□□ -1.45
SDCBP-208ENST00000520228 ZNF836Q6ZNA1 936 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 SNX32Q86XE0 403 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 VRK2Q86Y07 508 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 C10orf111Q8N326 155 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 CNEP1R1Q8N9A8 125 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 POMGNT2Q8NAT1 580 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 MS4A10Q96PG2 267 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 ZNF607Q96SK3 696 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 SH3GL1Q99961 368 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 CCDC106Q9BWC9 280 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 NSRP1Q9H0G5 558 aaKnown RBP5.98□□□□□ -1.45
SDCBP-208ENST00000520228 TMEM38AQ9H6F2 299 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 RNF122Q9H9V4 155 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 ARMCX1Q9P291 453 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 PRDM4Q9UKN5 801 aa5.98□□□□□ -1.45
SDCBP-208ENST00000520228 ZNF443Q9Y2A4 671 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-208ENST00000520228 SPIN1Q9Y657 262 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-208ENST00000520228 ICE1Q9Y2F5 2266 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 DIDO1Q9BTC0 2240 aaKnown RBP5.97□□□□□ -1.45
SDCBP-208ENST00000520228 ZNF407Q9C0G0 2248 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 PRORSD1PA6NEY8 169 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 PRR32B1ATL7 298 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 FAAHO00519 579 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 SERPINB7O75635 380 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 TNFSF13O75888 250 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 AQP8O94778 261 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 PLGP00747 810 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-208ENST00000520228 DANCRP0C864 163 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 PABPC4LP0CB38 370 aaKnown RBP5.97□□□□□ -1.45
SDCBP-208ENST00000520228 GKN3PP0CG01 181 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 CCNA2P20248 432 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 FKBP2P26885 142 aaKnown RBP5.97□□□□□ -1.45
SDCBP-208ENST00000520228 AQP1P29972 269 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 SLC1A3P43003 542 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 ASCL1P50553 236 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 POLR2HP52434 150 aaKnown RBP5.97□□□□□ -1.45
SDCBP-208ENST00000520228 COPZ1P61923 177 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 GNGT1P63211 74 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms