RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 LINC00346Q8IVM7 164 aa19.5■□□□□ 0.71
SKP1-206ENST00000519321 LRRC75A-AS1Q8N1F1 130 aa19.5■□□□□ 0.71
SKP1-206ENST00000519321 PAQR4Q8N4S7 273 aaPredicted RBP19.5■□□□□ 0.71
SKP1-206ENST00000519321 ZNF511Q8NB15 262 aa19.5■□□□□ 0.71
SKP1-206ENST00000519321 TMEM163Q8TC26 289 aa19.5■□□□□ 0.71
SKP1-206ENST00000519321 DCLRE1BQ9H816 532 aa19.5■□□□□ 0.71
SKP1-206ENST00000519321 MARCH7Q9H992 704 aa19.5■□□□□ 0.71
SKP1-206ENST00000519321 PLCE1Q9P212 2302 aa19.5■□□□□ 0.71
SKP1-206ENST00000519321 ZNF593O00488 134 aaPredicted RBP19.49■□□□□ 0.71
SKP1-206ENST00000519321 TLX2O43763 284 aaPredicted RBP19.49■□□□□ 0.71
SKP1-206ENST00000519321 ICMTO60725 284 aa19.49■□□□□ 0.71
SKP1-206ENST00000519321 PAX1P15863 534 aa19.49■□□□□ 0.71
SKP1-206ENST00000519321 POLR2IP36954 125 aaKnown RBP19.49■□□□□ 0.71
SKP1-206ENST00000519321 TRIP10Q15642 601 aa19.49■□□□□ 0.71
SKP1-206ENST00000519321 SHFQ7M4L6 423 aa19.49■□□□□ 0.71
SKP1-206ENST00000519321 TCEANCQ8N8B7 351 aa19.49■□□□□ 0.71
SKP1-206ENST00000519321 TRMT61AQ96FX7 289 aaKnown RBP19.49■□□□□ 0.71
SKP1-206ENST00000519321 INTS14Q96SY0 518 aa19.49■□□□□ 0.71
SKP1-206ENST00000519321 PITX2Q99697 317 aa19.49■□□□□ 0.71
SKP1-206ENST00000519321 SLC29A1Q99808 456 aa19.49■□□□□ 0.71
SKP1-206ENST00000519321 WDR76Q9H967 626 aa19.49■□□□□ 0.71
SKP1-206ENST00000519321 PMF1-BGLAPU3KQ54 211 aa19.49■□□□□ 0.71
SKP1-206ENST00000519321 POLQO75417 2590 aa19.49■□□□□ 0.71
SKP1-206ENST00000519321 NAV2Q8IVL1 2488 aa19.48■□□□□ 0.71
SKP1-206ENST00000519321 OVOL3O00110 214 aa19.48■□□□□ 0.71
SKP1-206ENST00000519321 CD8AP01732 235 aa19.48■□□□□ 0.71
SKP1-206ENST00000519321 LCKP06239 509 aa19.48■□□□□ 0.71
SKP1-206ENST00000519321 SPARCP09486 303 aa19.48■□□□□ 0.71
SKP1-206ENST00000519321 FAM157BP0CG42 384 aa19.48■□□□□ 0.71
SKP1-206ENST00000519321 SLC2A5P22732 501 aa19.48■□□□□ 0.71
SKP1-206ENST00000519321 EVX1P49640 407 aa19.48■□□□□ 0.71
SKP1-206ENST00000519321 SNRPD2P62316 118 aaKnown RBP19.48■□□□□ 0.71
SKP1-206ENST00000519321 EFNB1P98172 346 aa19.48■□□□□ 0.71
SKP1-206ENST00000519321 NXNL2Q5VZ03 156 aa19.48■□□□□ 0.71
SKP1-206ENST00000519321 C11orf71Q6IPW1 123 aa19.48■□□□□ 0.71
SKP1-206ENST00000519321 RGS7BPQ6MZT1 257 aaPredicted RBP19.48■□□□□ 0.71
SKP1-206ENST00000519321 LYPD4Q6UWN0 246 aa19.48■□□□□ 0.71
SKP1-206ENST00000519321 ERI1Q8IV48 349 aaKnown RBP19.48■□□□□ 0.71
SKP1-206ENST00000519321 OR8J1Q8NGP2 316 aa19.48■□□□□ 0.71
SKP1-206ENST00000519321 TRUB1Q8WWH5 349 aaKnown RBP19.48■□□□□ 0.71
SKP1-206ENST00000519321 HRASLS5Q96KN8 279 aa19.48■□□□□ 0.71
SKP1-206ENST00000519321 C4orf45Q96LM5 186 aa19.48■□□□□ 0.71
SKP1-206ENST00000519321 RDH12Q96NR8 316 aa19.48■□□□□ 0.71
SKP1-206ENST00000519321 PLK3Q9H4B4 646 aa19.48■□□□□ 0.71
SKP1-206ENST00000519321 ZNF701Q9NV72 531 aaPredicted RBP19.48■□□□□ 0.71
SKP1-206ENST00000519321 ITGB1BP2Q9UKP3 347 aa19.48■□□□□ 0.71
SKP1-206ENST00000519321 TACC2O95359 2948 aa19.48■□□□□ 0.71
SKP1-206ENST00000519321 PDZD2O15018 2839 aa19.47■□□□□ 0.71
SKP1-206ENST00000519321 TUBG1P23258 451 aa19.47■□□□□ 0.71
SKP1-206ENST00000519321 ART1P52961 327 aa19.47■□□□□ 0.71
SKP1-206ENST00000519321 SELENOVP59797 346 aa19.47■□□□□ 0.71
SKP1-206ENST00000519321 APOFQ13790 326 aa19.47■□□□□ 0.71
SKP1-206ENST00000519321 SWI5Q1ZZU3 235 aa19.47■□□□□ 0.71
SKP1-206ENST00000519321 CFAP77Q6ZQR2 320 aa19.47■□□□□ 0.71
SKP1-206ENST00000519321 GID4Q8IVV7 300 aa19.47■□□□□ 0.71
SKP1-206ENST00000519321 PACRGLQ8N7B6 248 aa19.47■□□□□ 0.71
SKP1-206ENST00000519321 BBS1Q8NFJ9 593 aa19.47■□□□□ 0.71
SKP1-206ENST00000519321 OR6N2Q8NGY6 317 aa19.47■□□□□ 0.71
SKP1-206ENST00000519321 MRPL24Q96A35 216 aaKnown RBP19.47■□□□□ 0.71
SKP1-206ENST00000519321 ZMYND19Q96E35 227 aaPredicted RBP19.47■□□□□ 0.71
SKP1-206ENST00000519321 COG8Q96MW5 612 aa19.47■□□□□ 0.71
SKP1-206ENST00000519321 ATF6BQ99941 703 aa19.47■□□□□ 0.71
SKP1-206ENST00000519321 GSX2Q9BZM3 304 aa19.47■□□□□ 0.71
SKP1-206ENST00000519321 TUBG2Q9NRH3 451 aa19.47■□□□□ 0.71
SKP1-206ENST00000519321 TBCCD1Q9NVR7 557 aa19.47■□□□□ 0.71
SKP1-206ENST00000519321 SLC22A31A6NKX4 558 aa19.46■□□□□ 0.71
SKP1-206ENST00000519321 J3QW42 95 aa19.46■□□□□ 0.71
SKP1-206ENST00000519321 GPRIN2O60269 458 aa19.46■□□□□ 0.71
SKP1-206ENST00000519321 ABHD16AO95870 558 aa19.46■□□□□ 0.71
SKP1-206ENST00000519321 WNT5AP41221 380 aa19.46■□□□□ 0.71
SKP1-206ENST00000519321 RGS6P49758 472 aa19.46■□□□□ 0.71
SKP1-206ENST00000519321 ZIK1Q3SY52 487 aaPredicted RBP19.46■□□□□ 0.71
SKP1-206ENST00000519321 TMEM154Q6P9G4 183 aa19.46■□□□□ 0.71
SKP1-206ENST00000519321 DCXRQ7Z4W1 244 aa19.46■□□□□ 0.71
SKP1-206ENST00000519321 TIGD4Q8IY51 512 aa19.46■□□□□ 0.71
SKP1-206ENST00000519321 OR1J1Q8NGS3 322 aa19.46■□□□□ 0.71
SKP1-206ENST00000519321 MAP6Q96JE9 813 aa19.46■□□□□ 0.71
SKP1-206ENST00000519321 IL4I1Q96RQ9 567 aa19.46■□□□□ 0.71
SKP1-206ENST00000519321 TEAD3Q99594 435 aa19.46■□□□□ 0.71
SKP1-206ENST00000519321 CXXC4Q9H2H0 198 aa19.46■□□□□ 0.71
SKP1-206ENST00000519321 TOR3AQ9H497 397 aa19.46■□□□□ 0.71
SKP1-206ENST00000519321 IMPAD1Q9NX62 359 aa19.46■□□□□ 0.71
SKP1-206ENST00000519321 H0YHG0 523 aa19.45■□□□□ 0.7
SKP1-206ENST00000519321 H3BSA7 217 aa19.45■□□□□ 0.7
SKP1-206ENST00000519321 MST1LQ2TV78 715 aa19.45■□□□□ 0.7
SKP1-206ENST00000519321 MEPCEQ7L2J0 689 aaKnown RBP19.45■□□□□ 0.7
SKP1-206ENST00000519321 DPY19L4Q7Z388 723 aa19.45■□□□□ 0.7
SKP1-206ENST00000519321 ZNF454Q8N9F8 522 aa19.45■□□□□ 0.7
SKP1-206ENST00000519321 ABHD4Q8TB40 342 aa19.45■□□□□ 0.7
SKP1-206ENST00000519321 FAM81AQ8TBF8 368 aa19.45■□□□□ 0.7
SKP1-206ENST00000519321 SPTSSAQ969W0 71 aa19.45■□□□□ 0.7
SKP1-206ENST00000519321 CACNG6Q9BXT2 260 aa19.45■□□□□ 0.7
SKP1-206ENST00000519321 OR51B6Q9H340 312 aa19.45■□□□□ 0.7
SKP1-206ENST00000519321 PNRC2Q9NPJ4 139 aaKnown RBP19.45■□□□□ 0.7
SKP1-206ENST00000519321 DDX28Q9NUL7 540 aaKnown RBP19.45■□□□□ 0.7
SKP1-206ENST00000519321 SMPD3Q9NY59 655 aaPredicted RBP19.45■□□□□ 0.7
SKP1-206ENST00000519321 GRIP1Q9Y3R0 1128 aa19.45■□□□□ 0.7
SKP1-206ENST00000519321 H7C417 338 aa19.44■□□□□ 0.7
SKP1-206ENST00000519321 RPS27P42677 84 aaKnown RBP19.44■□□□□ 0.7
SKP1-206ENST00000519321 PTH2RP49190 550 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms