RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 PLET1Q6UQ28 207 aa2.58□□□□□ -2
SQLE-202ENST00000518604 CALHM1Q8IU99 346 aa2.58□□□□□ -2
SQLE-202ENST00000518604 ARRDC1Q8N5I2 433 aa2.58□□□□□ -2
SQLE-202ENST00000518604 METTL13Q8N6R0 699 aa2.58□□□□□ -2
SQLE-202ENST00000518604 SYNPRQ8TBG9 265 aa2.58□□□□□ -2
SQLE-202ENST00000518604 RGP1Q92546 391 aaPredicted RBP2.58□□□□□ -2
SQLE-202ENST00000518604 TMEM230Q96A57 120 aa2.58□□□□□ -2
SQLE-202ENST00000518604 C8orf44Q96CB5 159 aa2.58□□□□□ -2
SQLE-202ENST00000518604 NEUROG2Q9H2A3 272 aa2.58□□□□□ -2
SQLE-202ENST00000518604 NTN4Q9HB63 628 aa2.58□□□□□ -2
SQLE-202ENST00000518604 LYARQ9NX58 379 aaKnown RBP2.58□□□□□ -2
SQLE-202ENST00000518604 SLC17A4Q9Y2C5 497 aa2.58□□□□□ -2
SQLE-202ENST00000518604 PLA2R1Q13018 1463 aa2.58□□□□□ -2
SQLE-202ENST00000518604 BPY2O14599 106 aa2.57□□□□□ -2
SQLE-202ENST00000518604 CDH16O75309 829 aa2.57□□□□□ -2
SQLE-202ENST00000518604 GCM2O75603 506 aaPredicted RBP2.57□□□□□ -2
SQLE-202ENST00000518604 AQP8O94778 261 aa2.57□□□□□ -2
SQLE-202ENST00000518604 FGFR1OPO95684 399 aaKnown RBP2.57□□□□□ -2
SQLE-202ENST00000518604 NPY1RP25929 384 aa2.57□□□□□ -2
SQLE-202ENST00000518604 SYKP43405 635 aa2.57□□□□□ -2
SQLE-202ENST00000518604 HCAR3P49019 387 aa2.57□□□□□ -2
SQLE-202ENST00000518604 P2RX1P51575 399 aa2.57□□□□□ -2
SQLE-202ENST00000518604 EIF3EP60228 445 aaKnown RBP2.57□□□□□ -2
SQLE-202ENST00000518604 RPS15P62841 145 aaKnown RBP2.57□□□□□ -2
SQLE-202ENST00000518604 LIPEQ05469 1076 aa2.57□□□□□ -2
SQLE-202ENST00000518604 SELENBP1Q13228 472 aa2.57□□□□□ -2
SQLE-202ENST00000518604 TRAM2Q15035 370 aa2.57□□□□□ -2
SQLE-202ENST00000518604 PSMD5Q16401 504 aa2.57□□□□□ -2
SQLE-202ENST00000518604 ZNF684Q5T5D7 378 aa2.57□□□□□ -2
SQLE-202ENST00000518604 BZW1Q7L1Q6 419 aaKnown RBP2.57□□□□□ -2
SQLE-202ENST00000518604 LUZP2Q86TE4 346 aa2.57□□□□□ -2
SQLE-202ENST00000518604 NPWQ8N729 165 aa2.57□□□□□ -2
SQLE-202ENST00000518604 CHST4Q8NCG5 386 aa2.57□□□□□ -2
SQLE-202ENST00000518604 LYPD6BQ8NI32 183 aa2.57□□□□□ -2
SQLE-202ENST00000518604 PIFOQ8TCI5 191 aa2.57□□□□□ -2
SQLE-202ENST00000518604 EEF1AKMT3Q96AZ1 226 aa2.57□□□□□ -2
SQLE-202ENST00000518604 LINC00477Q96M19 166 aa2.57□□□□□ -2
SQLE-202ENST00000518604 GSDMAQ96QA5 445 aa2.57□□□□□ -2
SQLE-202ENST00000518604 SPNS1Q9H2V7 528 aa2.57□□□□□ -2
SQLE-202ENST00000518604 ZNF282Q9UDV7 671 aaPredicted RBP2.57□□□□□ -2
SQLE-202ENST00000518604 TET2Q6N021 2002 aaPredicted RBP2.56□□□□□ -2
SQLE-202ENST00000518604 MYO10Q9HD67 2058 aa2.56□□□□□ -2
SQLE-202ENST00000518604 TRAV40A0A0B4J280 105 aa2.56□□□□□ -2
SQLE-202ENST00000518604 OR2AG2A6NM03 316 aa2.56□□□□□ -2
SQLE-202ENST00000518604 ZNF207O43670 478 aaKnown RBP2.56□□□□□ -2
SQLE-202ENST00000518604 CDC40O60508 579 aaKnown RBP eCLIP2.56□□□□□ -22e-7■□□□□ 11
SQLE-202ENST00000518604 ARG1P05089 322 aa2.56□□□□□ -2
SQLE-202ENST00000518604 CTSLP07711 333 aa2.56□□□□□ -2
SQLE-202ENST00000518604 ADRA2AP08913 450 aa2.56□□□□□ -2
SQLE-202ENST00000518604 OR56A5P0C7T3 313 aa2.56□□□□□ -2
SQLE-202ENST00000518604 ERGP11308 486 aa2.56□□□□□ -2
SQLE-202ENST00000518604 GGT1P19440 569 aa2.56□□□□□ -2
SQLE-202ENST00000518604 GTF2E2P29084 291 aaKnown RBP2.56□□□□□ -2
SQLE-202ENST00000518604 IFT88Q13099 833 aa2.56□□□□□ -2
SQLE-202ENST00000518604 MOBPQ13875 183 aa2.56□□□□□ -2
SQLE-202ENST00000518604 KIR2DS1Q14954 304 aa2.56□□□□□ -2
SQLE-202ENST00000518604 XKR4Q5GH76 650 aa2.56□□□□□ -2
SQLE-202ENST00000518604 GPR107Q5VW38 600 aa2.56□□□□□ -2
SQLE-202ENST00000518604 SPESP1Q6UW49 350 aa2.56□□□□□ -2
SQLE-202ENST00000518604 MBOAT1Q6ZNC8 495 aa2.56□□□□□ -2
SQLE-202ENST00000518604 SSX9Q7RTT3 188 aa2.56□□□□□ -2
SQLE-202ENST00000518604 ZNF561Q8N587 486 aa2.56□□□□□ -2
SQLE-202ENST00000518604 CAPSLQ8WWF8 208 aa2.56□□□□□ -2
SQLE-202ENST00000518604 DCPSQ96C86 337 aaKnown RBP2.56□□□□□ -2
SQLE-202ENST00000518604 XPO6Q96QU8 1125 aaKnown RBP2.56□□□□□ -2
SQLE-202ENST00000518604 TIMM17AQ99595 171 aa2.56□□□□□ -2
SQLE-202ENST00000518604 SCRT1Q9BWW7 348 aa2.56□□□□□ -2
SQLE-202ENST00000518604 ANKRD60Q9BZ19 345 aa2.56□□□□□ -2
SQLE-202ENST00000518604 SIRT7Q9NRC8 400 aa2.56□□□□□ -2
SQLE-202ENST00000518604 GGA2Q9UJY4 613 aa2.56□□□□□ -2
SQLE-202ENST00000518604 CAMTA1Q9Y6Y1 1673 aa2.56□□□□□ -2
SQLE-202ENST00000518604 TRAV6A0A075B6T7 132 aa2.55□□□□□ -2
SQLE-202ENST00000518604 IGHV1OR15-9A0A0B4J2B8 117 aa2.55□□□□□ -2
SQLE-202ENST00000518604 IGKV6-21A0A0C4DH24 114 aa2.55□□□□□ -2
SQLE-202ENST00000518604 A0A1W2PQ67 120 aa2.55□□□□□ -2
SQLE-202ENST00000518604 A6NDN8 102 aa2.55□□□□□ -2
SQLE-202ENST00000518604 RAD51CO43502 376 aa2.55□□□□□ -2
SQLE-202ENST00000518604 SEMA3DO95025 777 aa2.55□□□□□ -2
SQLE-202ENST00000518604 NSD2O96028 1365 aa2.55□□□□□ -2
SQLE-202ENST00000518604 HLA-DQA1P01909 254 aa2.55□□□□□ -2
SQLE-202ENST00000518604 APCSP02743 223 aa2.55□□□□□ -2
SQLE-202ENST00000518604 LINC00869P0C866 280 aa2.55□□□□□ -2
SQLE-202ENST00000518604 C1GALT1C1LP0DN25 315 aa2.55□□□□□ -2
SQLE-202ENST00000518604 BCKDHBP21953 392 aa2.55□□□□□ -2
SQLE-202ENST00000518604 U2AF2P26368 475 aaKnown RBP eCLIP2.55□□□□□ -2
SQLE-202ENST00000518604 SYNJ2BPP57105 145 aa2.55□□□□□ -2
SQLE-202ENST00000518604 PPP1CBP62140 327 aa2.55□□□□□ -2
SQLE-202ENST00000518604 PRR3P79522 188 aaKnown RBP2.55□□□□□ -2
SQLE-202ENST00000518604 MERTKQ12866 999 aa2.55□□□□□ -2
SQLE-202ENST00000518604 COX19Q49B96 90 aa2.55□□□□□ -2
SQLE-202ENST00000518604 SMUG1Q53HV7 270 aa2.55□□□□□ -2
SQLE-202ENST00000518604 TCEAL5Q5H9L2 206 aa2.55□□□□□ -2
SQLE-202ENST00000518604 SHISA6Q6ZSJ9 500 aa2.55□□□□□ -2
SQLE-202ENST00000518604 GABRG1Q8N1C3 465 aa2.55□□□□□ -2
SQLE-202ENST00000518604 OR8U1Q8NH10 309 aa2.55□□□□□ -2
SQLE-202ENST00000518604 OR5K2Q8NHB8 316 aa2.55□□□□□ -2
SQLE-202ENST00000518604 ZNF461Q8TAF7 563 aa2.55□□□□□ -2
SQLE-202ENST00000518604 NUBPLQ8TB37 319 aa2.55□□□□□ -2
SQLE-202ENST00000518604 TCEAL3Q969E4 200 aa2.55□□□□□ -2
SQLE-202ENST00000518604 ECHDC3Q96DC8 303 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms