RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 ELFN2Q5R3F8 820 aa18.91■□□□□ 0.62
VEGFA-217ENST00000518538 ARL9Q6T311 187 aa18.91■□□□□ 0.62
VEGFA-217ENST00000518538 LYPD4Q6UWN0 246 aa18.91■□□□□ 0.62
VEGFA-217ENST00000518538 LINC00346Q8IVM7 164 aa18.91■□□□□ 0.62
VEGFA-217ENST00000518538 C1orf174Q8IYL3 243 aa18.91■□□□□ 0.62
VEGFA-217ENST00000518538 ZNF101Q8IZC7 436 aa18.91■□□□□ 0.62
VEGFA-217ENST00000518538 OR6K6Q8NGW6 343 aa18.91■□□□□ 0.62
VEGFA-217ENST00000518538 PTP4A1Q93096 173 aa18.91■□□□□ 0.62
VEGFA-217ENST00000518538 OTULINQ96BN8 352 aa18.91■□□□□ 0.62
VEGFA-217ENST00000518538 PLEKHA8Q96JA3 519 aa18.91■□□□□ 0.62
VEGFA-217ENST00000518538 C4orf45Q96LM5 186 aa18.91■□□□□ 0.62
VEGFA-217ENST00000518538 CIB1Q99828 191 aa18.91■□□□□ 0.62
VEGFA-217ENST00000518538 HDHD2Q9H0R4 259 aa18.91■□□□□ 0.62
VEGFA-217ENST00000518538 ELOVL3Q9HB03 270 aa18.91■□□□□ 0.62
VEGFA-217ENST00000518538 COMMD3-BMI1R4GMX3 469 aa18.91■□□□□ 0.62
VEGFA-217ENST00000518538 ERVS71-1P61550 626 aa18.9■□□□□ 0.62
VEGFA-217ENST00000518538 ZSCAN26Q16670 478 aa18.9■□□□□ 0.62
VEGFA-217ENST00000518538 LINC01590Q5TEZ4 76 aa18.9■□□□□ 0.62
VEGFA-217ENST00000518538 PLBD1Q6P4A8 553 aa18.9■□□□□ 0.62
VEGFA-217ENST00000518538 CFAP77Q6ZQR2 320 aa18.9■□□□□ 0.62
VEGFA-217ENST00000518538 ZNF511Q8NB15 262 aa18.9■□□□□ 0.62
VEGFA-217ENST00000518538 OR1J1Q8NGS3 322 aa18.9■□□□□ 0.62
VEGFA-217ENST00000518538 COQ7Q99807 217 aa18.9■□□□□ 0.62
VEGFA-217ENST00000518538 RBM4BQ9BQ04 359 aaKnown RBP18.9■□□□□ 0.62
VEGFA-217ENST00000518538 SYT3Q9BQG1 590 aa18.9■□□□□ 0.62
VEGFA-217ENST00000518538 PRRG3Q9BZD7 231 aa18.9■□□□□ 0.62
VEGFA-217ENST00000518538 TVP23BQ9NYZ1 205 aa18.9■□□□□ 0.62
VEGFA-217ENST00000518538 FZR1Q9UM11 496 aa18.9■□□□□ 0.62
VEGFA-217ENST00000518538 AKAP9Q99996 3911 aa18.9■□□□□ 0.62
VEGFA-217ENST00000518538 ABHD16AO95870 558 aa18.89■□□□□ 0.61
VEGFA-217ENST00000518538 ZNF250P15622 560 aa18.89■□□□□ 0.61
VEGFA-217ENST00000518538 ENTPD1P49961 510 aa18.89■□□□□ 0.61
VEGFA-217ENST00000518538 SNAPC1Q16533 368 aa18.89■□□□□ 0.61
VEGFA-217ENST00000518538 RFPL4BQ6ZWI9 263 aa18.89■□□□□ 0.61
VEGFA-217ENST00000518538 ABHD4Q8TB40 342 aa18.89■□□□□ 0.61
VEGFA-217ENST00000518538 Q96MF0 132 aa18.89■□□□□ 0.61
VEGFA-217ENST00000518538 DCLRE1CQ96SD1 692 aaKnown RBP18.89■□□□□ 0.61
VEGFA-217ENST00000518538 OR51V1Q9H2C8 321 aa18.89■□□□□ 0.61
VEGFA-217ENST00000518538 WDR76Q9H967 626 aa18.89■□□□□ 0.61
VEGFA-217ENST00000518538 HINT3Q9NQE9 182 aaKnown RBP18.89■□□□□ 0.61
VEGFA-217ENST00000518538 ARID1AO14497 2285 aa18.89■□□□□ 0.61
VEGFA-217ENST00000518538 ZAR1LA6NP61 321 aa18.88■□□□□ 0.61
VEGFA-217ENST00000518538 GLCEO94923 617 aa18.88■□□□□ 0.61
VEGFA-217ENST00000518538 EPHA2P29317 976 aa18.88■□□□□ 0.61
VEGFA-217ENST00000518538 SELENOVP59797 346 aa18.88■□□□□ 0.61
VEGFA-217ENST00000518538 PPP1CBP62140 327 aa18.88■□□□□ 0.61
VEGFA-217ENST00000518538 PCK2Q16822 640 aa18.88■□□□□ 0.61
VEGFA-217ENST00000518538 TEX30Q5JUR7 227 aa18.88■□□□□ 0.61
VEGFA-217ENST00000518538 SLX4IPQ5VYV7 408 aa18.88■□□□□ 0.61
VEGFA-217ENST00000518538 LRP11Q86VZ4 500 aa18.88■□□□□ 0.61
VEGFA-217ENST00000518538 CPOQ8IVL8 374 aa18.88■□□□□ 0.61
VEGFA-217ENST00000518538 SYNPRQ8TBG9 265 aa18.88■□□□□ 0.61
VEGFA-217ENST00000518538 SLC7A6Q92536 515 aa18.88■□□□□ 0.61
VEGFA-217ENST00000518538 MAP6Q96JE9 813 aa18.88■□□□□ 0.61
VEGFA-217ENST00000518538 PITX2Q99697 317 aa18.88■□□□□ 0.61
VEGFA-217ENST00000518538 DYNLRB1Q9NP97 96 aa18.88■□□□□ 0.61
VEGFA-217ENST00000518538 PNRC2Q9NPJ4 139 aaKnown RBP18.88■□□□□ 0.61
VEGFA-217ENST00000518538 TBCCD1Q9NVR7 557 aa18.88■□□□□ 0.61
VEGFA-217ENST00000518538 DUSP13Q9UII6 198 aa18.88■□□□□ 0.61
VEGFA-217ENST00000518538 IGLV3-9A0A075B6K5 115 aa18.87■□□□□ 0.61
VEGFA-217ENST00000518538 M0R233 179 aa18.87■□□□□ 0.61
VEGFA-217ENST00000518538 PRODHO43272 600 aa18.87■□□□□ 0.61
VEGFA-217ENST00000518538 NGFP01138 241 aa18.87■□□□□ 0.61
VEGFA-217ENST00000518538 SPARCP09486 303 aa18.87■□□□□ 0.61
VEGFA-217ENST00000518538 PSKH1P11801 424 aa18.87■□□□□ 0.61
VEGFA-217ENST00000518538 RPS27P42677 84 aaKnown RBP18.87■□□□□ 0.61
VEGFA-217ENST00000518538 EFNA4P52798 201 aa18.87■□□□□ 0.61
VEGFA-217ENST00000518538 NUDT6P53370 316 aa18.87■□□□□ 0.61
VEGFA-217ENST00000518538 KLF3P57682 345 aaPredicted RBP18.87■□□□□ 0.61
VEGFA-217ENST00000518538 ECH1Q13011 328 aa18.87■□□□□ 0.61
VEGFA-217ENST00000518538 TMEM154Q6P9G4 183 aa18.87■□□□□ 0.61
VEGFA-217ENST00000518538 CXXC5Q7LFL8 322 aaKnown RBP18.87■□□□□ 0.61
VEGFA-217ENST00000518538 PQLC1Q8N2U9 271 aa18.87■□□□□ 0.61
VEGFA-217ENST00000518538 IPCEF1Q8WWN9 437 aaPredicted RBP18.87■□□□□ 0.61
VEGFA-217ENST00000518538 STMN2Q93045 179 aa18.87■□□□□ 0.61
VEGFA-217ENST00000518538 SORCS2Q96PQ0 1159 aa18.87■□□□□ 0.61
VEGFA-217ENST00000518538 ATF6BQ99941 703 aa18.87■□□□□ 0.61
VEGFA-217ENST00000518538 VRK1Q99986 396 aaPredicted RBP18.87■□□□□ 0.61
VEGFA-217ENST00000518538 GABARAPL3Q9BY60 117 aa18.87■□□□□ 0.61
VEGFA-217ENST00000518538 MARCH7Q9H992 704 aa18.87■□□□□ 0.61
VEGFA-217ENST00000518538 MYEF2Q9P2K5 600 aaKnown RBP18.87■□□□□ 0.61
VEGFA-217ENST00000518538 GRIP1Q9Y3R0 1128 aa18.87■□□□□ 0.61
VEGFA-217ENST00000518538 A0A1W2PPW3 197 aa18.86■□□□□ 0.61
VEGFA-217ENST00000518538 H3BSA7 217 aa18.86■□□□□ 0.61
VEGFA-217ENST00000518538 ZNF593O00488 134 aaPredicted RBP18.86■□□□□ 0.61
VEGFA-217ENST00000518538 ALPLP05186 524 aa18.86■□□□□ 0.61
VEGFA-217ENST00000518538 DBHP09172 617 aa18.86■□□□□ 0.61
VEGFA-217ENST00000518538 GSTT1P30711 240 aa18.86■□□□□ 0.61
VEGFA-217ENST00000518538 CLEC12BQ2HXU8 276 aa18.86■□□□□ 0.61
VEGFA-217ENST00000518538 KRTAP27-1Q3LI81 207 aa18.86■□□□□ 0.61
VEGFA-217ENST00000518538 ZNF718Q3SXZ3 478 aa18.86■□□□□ 0.61
VEGFA-217ENST00000518538 SLC35D3Q5M8T2 416 aa18.86■□□□□ 0.61
VEGFA-217ENST00000518538 SPATA46Q5T0L3 261 aa18.86■□□□□ 0.61
VEGFA-217ENST00000518538 MBNL2Q5VZF2 373 aaKnown RBP18.86■□□□□ 0.61
VEGFA-217ENST00000518538 C12orf73Q69YU5 71 aa18.86■□□□□ 0.61
VEGFA-217ENST00000518538 SLC25A40Q8TBP6 338 aa18.86■□□□□ 0.61
VEGFA-217ENST00000518538 MARS2Q96GW9 593 aaKnown RBP18.86■□□□□ 0.61
VEGFA-217ENST00000518538 INTS14Q96SY0 518 aa18.86■□□□□ 0.61
VEGFA-217ENST00000518538 TMUB1Q9BVT8 246 aa18.86■□□□□ 0.61
VEGFA-217ENST00000518538 RAB1BQ9H0U4 201 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms