RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 ERLIN1O75477 346 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 GATBO75879 557 aaKnown RBP-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 REC8O95072 547 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 MYL1P05976 194 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 KLK3P07288 261 aaPredicted RBP-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 ABCB1P08183 1280 aaPredicted RBP-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 CPMP14384 443 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 CAPN3P20807 821 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 USF1P22415 310 aaPredicted RBP-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 ATP5A1P25705 553 aaKnown RBP-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 PSMA4P25789 261 aaKnown RBP-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 PRDX2P32119 198 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 RFC2P35250 354 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 ACTN2P35609 894 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 CFHR2P36980 270 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 NNMTP40261 264 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 FRKP42685 505 aaPredicted RBP-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 NSG1P42857 185 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 MAGEA1P43355 309 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 REG1BP48304 166 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 ETV1P50549 477 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 SGSHP51688 502 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 ARL4CP56559 192 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 SLC38A11Q08AI6 406 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 TCP10Q12799 353 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 AIMP2Q13155 320 aaKnown RBP-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 DGCR6Q14129 220 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 WTAPQ15007 396 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 SLC15A2Q16348 729 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 TNXAQ16473 311 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 STX1AQ16623 288 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 CLPPQ16740 277 aaPredicted RBP-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 BCL7AQ4VC05 210 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 LBHQ53QV2 105 aaPredicted RBP-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 LRRC73Q5JTD7 316 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 C10orf55Q5SWW7 151 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 CCDC137Q6PK04 289 aaKnown RBP-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 TMEM144Q7Z5S9 345 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 SLC26A11Q86WA9 606 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 CDR2LQ86X02 465 aaPredicted RBP-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 GKN2Q86XP6 184 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 PDILTQ8N807 584 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 Q8N814 137 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 C12orf29Q8N999 325 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 CYB561A3Q8NBI2 242 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 NEK11Q8NG66 645 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 OR52H1Q8NGJ2 320 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 SGMS2Q8NHU3 365 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 ASB17Q8WXJ9 295 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 ITFG2Q969R8 447 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 MRGPRFQ96AM1 343 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 SAT2Q96F10 170 aaPredicted RBP-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 SDSLQ96GA7 329 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 PAGE5Q96GU1 130 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 ERMAPQ96PL5 475 aaPredicted RBP-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 OR5B2Q96R09 309 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 PEBP4Q96S96 227 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 GPR21Q99679 349 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 CRB3Q9BUF7 120 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 OSBPL10Q9BXB5 764 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 IMUPQ9GZP8 106 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 DPH5Q9H2P9 285 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 GOLPH3LQ9H4A5 285 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 TMEM185BQ9H7F4 350 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 RIC8AQ9NPQ8 531 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 MRPL17Q9NRX2 175 aaKnown RBP-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 HAO2Q9NYQ3 351 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 NAGKQ9UJ70 344 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 HOOK1Q9UJC3 728 aaKnown RBP-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 VPREB3Q9UKI3 123 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 ADAM28Q9UKQ2 775 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 CAB39Q9Y376 341 aaPredicted RBP-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 ANK3Q12955 4377 aaKnown RBP-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 SLX4Q8IY92 1834 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 EIF4G1Q04637 1599 aaKnown RBP-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 E9PCH4 1651 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 COL4A5P29400 1685 aa-1.48□□□□□ -2.65
RNU6-1238P-201ENST00000517215 NUP205Q92621 2012 aa-1.49□□□□□ -2.65
RNU6-1238P-201ENST00000517215 KDM5BQ9UGL1 1544 aa-1.49□□□□□ -2.65
RNU6-1238P-201ENST00000517215 MTORP42345 2549 aa-1.49□□□□□ -2.65
RNU6-1238P-201ENST00000517215 E7ESA3 106 aa-1.49□□□□□ -2.65
RNU6-1238P-201ENST00000517215 TRAPPC2LH3BP13 241 aa-1.49□□□□□ -2.65
RNU6-1238P-201ENST00000517215 M0R2N4 97 aa-1.49□□□□□ -2.65
RNU6-1238P-201ENST00000517215 FCN1O00602 326 aa-1.49□□□□□ -2.65
RNU6-1238P-201ENST00000517215 PRKYO43930 277 aa-1.49□□□□□ -2.65
RNU6-1238P-201ENST00000517215 MGRN1O60291 552 aa-1.49□□□□□ -2.65
RNU6-1238P-201ENST00000517215 SCO1O75880 301 aa-1.49□□□□□ -2.65
RNU6-1238P-201ENST00000517215 CA3P07451 260 aa-1.49□□□□□ -2.65
RNU6-1238P-201ENST00000517215 SERPINF2P08697 491 aa-1.49□□□□□ -2.65
RNU6-1238P-201ENST00000517215 PDHBP11177 359 aa-1.49□□□□□ -2.65
RNU6-1238P-201ENST00000517215 AK4P27144 223 aaPredicted RBP-1.49□□□□□ -2.65
RNU6-1238P-201ENST00000517215 GMPSP49915 693 aaPredicted RBP-1.49□□□□□ -2.65
RNU6-1238P-201ENST00000517215 NOVA1P51513 510 aaKnown RBP-1.49□□□□□ -2.65
RNU6-1238P-201ENST00000517215 IDH3GP51553 393 aaPredicted RBP-1.49□□□□□ -2.65
RNU6-1238P-201ENST00000517215 PRKXP51817 358 aa-1.49□□□□□ -2.65
RNU6-1238P-201ENST00000517215 GFERP55789 205 aa-1.49□□□□□ -2.65
RNU6-1238P-201ENST00000517215 HSD17B7P56937 341 aa-1.49□□□□□ -2.65
RNU6-1238P-201ENST00000517215 KCNK10P57789 538 aa-1.49□□□□□ -2.65
RNU6-1238P-201ENST00000517215 DMTNQ08495 405 aa-1.49□□□□□ -2.65
RNU6-1238P-201ENST00000517215 SPAG11BQ08648 103 aa-1.49□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms