RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 PIGLQ9Y2B2 252 aa0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 ZBED9Q6R2W3 1325 aa0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 ADGRA3Q8IWK6 1321 aa0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 LTBP2Q14767 1821 aa0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 A0A1B0GWJ7 208 aa0.84□□□□□ -2.27
RNU6-1088P-201ENST00000516850 C3orf84H3BNL1 204 aa0.84□□□□□ -2.27
RNU6-1088P-201ENST00000516850 GOSR2O14653 212 aa0.84□□□□□ -2.27
RNU6-1088P-201ENST00000516850 CDC40O60508 579 aaKnown RBP eCLIP0.84□□□□□ -2.27
RNU6-1088P-201ENST00000516850 PLIN3O60664 434 aa0.84□□□□□ -2.27
RNU6-1088P-201ENST00000516850 SEMA3DO95025 777 aa0.84□□□□□ -2.27
RNU6-1088P-201ENST00000516850 NCK1P16333 377 aa0.84□□□□□ -2.27
RNU6-1088P-201ENST00000516850 CCT3P49368 545 aaKnown RBP0.84□□□□□ -2.27
RNU6-1088P-201ENST00000516850 ACTG2P63267 376 aa0.84□□□□□ -2.27
RNU6-1088P-201ENST00000516850 NADK2Q4G0N4 442 aa0.84□□□□□ -2.27
RNU6-1088P-201ENST00000516850 EID2Q8N6I1 236 aa0.84□□□□□ -2.27
RNU6-1088P-201ENST00000516850 OR5T1Q8NG75 326 aa0.84□□□□□ -2.27
RNU6-1088P-201ENST00000516850 SCFD1Q8WVM8 642 aa0.84□□□□□ -2.27
RNU6-1088P-201ENST00000516850 PIBF1Q8WXW3 757 aa0.84□□□□□ -2.27
RNU6-1088P-201ENST00000516850 MTMR9Q96QG7 549 aa0.84□□□□□ -2.27
RNU6-1088P-201ENST00000516850 ZNF607Q96SK3 696 aa0.84□□□□□ -2.27
RNU6-1088P-201ENST00000516850 FMO2Q99518 471 aa0.84□□□□□ -2.27
RNU6-1088P-201ENST00000516850 GGTLC1Q9BX51 225 aa0.84□□□□□ -2.27
RNU6-1088P-201ENST00000516850 RIBC2Q9H4K1 309 aa0.84□□□□□ -2.27
RNU6-1088P-201ENST00000516850 CSNK1G1Q9HCP0 422 aa0.84□□□□□ -2.27
RNU6-1088P-201ENST00000516850 EPS15L1Q9UBC2 864 aa0.84□□□□□ -2.27
RNU6-1088P-201ENST00000516850 ST3GAL6Q9Y274 331 aa0.84□□□□□ -2.27
RNU6-1088P-201ENST00000516850 YARS2Q9Y2Z4 477 aaKnown RBP0.84□□□□□ -2.27
RNU6-1088P-201ENST00000516850 GOLT1BQ9Y3E0 138 aa0.84□□□□□ -2.27
RNU6-1088P-201ENST00000516850 KIAA1671Q9BY89 1806 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 ZNF816-ZNF321PA0A0X1KG74 233 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 RGSL1A5PLK6 1076 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 OR5H1A6NKK0 313 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 PRAMEF26H0Y7S4 382 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 L7N2F9 121 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 RDH16O75452 317 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 C1orf105O95561 183 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 FGGP02679 453 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 NTF3P20783 257 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 ARFIP1P53367 373 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 YWHAGP61981 247 aaKnown RBP eCLIP0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 HTD2P86397 168 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 RCAN2Q14206 197 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 DMC1Q14565 340 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 SP6Q3SY56 376 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 KLHL12Q53G59 568 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 CPTPQ5TA50 214 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 APOBEC3HQ6NTF7 200 aaKnown RBP0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 CDR2LQ86X02 465 aaPredicted RBP0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 PDIK1LQ8N165 341 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 LRRC75AQ8NAA5 344 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 N4BP2L2Q92802 583 aaPredicted RBP0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 ZFP3Q96NJ6 502 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 TRIM62Q9BVG3 475 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 ASF1BQ9NVP2 202 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 IL37Q9NZH6 218 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 SH3BGRL2Q9UJC5 107 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 ADAM28Q9UKQ2 775 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 ING4Q9UNL4 249 aa0.83□□□□□ -2.28
RNU6-1088P-201ENST00000516850 PCP4L1A6NKN8 68 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 K7EQM0 130 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 PSTPIP1O43586 416 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 EIF4E2O60573 245 aaKnown RBP0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 CCDC22O60826 627 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 KRT8P05787 483 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 CTSLP07711 333 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 INAFM2P0DMQ5 153 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 CD37P11049 281 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 IFNA8P32881 189 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 MAGEA8P43361 318 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 UBE2E1P51965 193 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 SYNJ2BPP57105 145 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 ZNF77Q15935 545 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 EXOC3L2Q2M3D2 409 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 NKAIN4Q8IVV8 208 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 CSGALNACT2Q8N6G5 542 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 COX18Q8N8Q8 333 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 LRRC29Q8WV35 223 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 DCPSQ96C86 337 aaKnown RBP0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 DUS3LQ96G46 650 aaKnown RBP0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 GPR82Q96P67 336 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 CSPG4P5Q96PW8 444 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 ZNF649Q9BS31 505 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 ANKRD19PQ9H560 264 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 DUSP21Q9H596 190 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 NLE1Q9NVX2 485 aaPredicted RBP0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 PTBP2Q9UKA9 531 aaKnown RBP0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 VANGL2Q9ULK5 521 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 KCNE3Q9Y6H6 103 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 GPRASP1Q5JY77 1395 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 PALLDQ8WX93 1383 aa0.82□□□□□ -2.28
RNU6-1088P-201ENST00000516850 TRAV26-1A0A087WT03 109 aa0.81□□□□□ -2.28
RNU6-1088P-201ENST00000516850 IGHV3-72A0A0B4J1Y9 119 aa0.81□□□□□ -2.28
RNU6-1088P-201ENST00000516850 GABRR3A8MPY1 467 aa0.81□□□□□ -2.28
RNU6-1088P-201ENST00000516850 KRBOX1C9JBD0 128 aa0.81□□□□□ -2.28
RNU6-1088P-201ENST00000516850 NDUFC2-KCTD14E9PQ53 114 aa0.81□□□□□ -2.28
RNU6-1088P-201ENST00000516850 CDC7O00311 574 aa0.81□□□□□ -2.28
RNU6-1088P-201ENST00000516850 NVLO15381 856 aaKnown RBP0.81□□□□□ -2.28
RNU6-1088P-201ENST00000516850 EEDO75530 441 aaKnown RBP0.81□□□□□ -2.28
RNU6-1088P-201ENST00000516850 GLSO94925 669 aaPredicted RBP0.81□□□□□ -2.28
RNU6-1088P-201ENST00000516850 SCELO95171 688 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms