RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 RPS27P42677 84 aaKnown RBP12.01□□□□□ -0.49
USP46-209ENST00000514536 SNRPD2P62316 118 aaKnown RBP12.01□□□□□ -0.49
USP46-209ENST00000514536 HIST1H3AP68431 136 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 PPP2R2BQ00005 443 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 RAB35Q15286 201 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 SNAPC1Q16533 368 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 Q5PR19 223 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 HIST2H3PS2Q5TEC6 136 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 SLC18B1Q6NT16 456 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 TMEM154Q6P9G4 183 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 HIST2H3AQ71DI3 136 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 LRP11Q86VZ4 500 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 KRTAP1-3Q8IUG1 177 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 ZNF101Q8IZC7 436 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 WFDC11Q8NEX6 87 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 OR1J1Q8NGS3 322 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 C4orf45Q96LM5 186 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 DOK1Q99704 481 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 RBM4BQ9BQ04 359 aaKnown RBP12.01□□□□□ -0.49
USP46-209ENST00000514536 SYT3Q9BQG1 590 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 MRPL37Q9BZE1 423 aaKnown RBP12.01□□□□□ -0.49
USP46-209ENST00000514536 BCL2L14Q9BZR8 327 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 HINT3Q9NQE9 182 aaKnown RBP12.01□□□□□ -0.49
USP46-209ENST00000514536 DUSP13Q9UII6 198 aa12.01□□□□□ -0.49
USP46-209ENST00000514536 OR6C6A6NF89 314 aa12□□□□□ -0.49
USP46-209ENST00000514536 ZNF593O00488 134 aaPredicted RBP12□□□□□ -0.49
USP46-209ENST00000514536 NGFP01138 241 aa12□□□□□ -0.49
USP46-209ENST00000514536 IGHV4-39P01824 125 aa12□□□□□ -0.49
USP46-209ENST00000514536 ELFN2Q5R3F8 820 aa12□□□□□ -0.49
USP46-209ENST00000514536 LINC01590Q5TEZ4 76 aa12□□□□□ -0.49
USP46-209ENST00000514536 CFAP77Q6ZQR2 320 aa12□□□□□ -0.49
USP46-209ENST00000514536 STMN2Q93045 179 aa12□□□□□ -0.49
USP46-209ENST00000514536 PITX2Q99697 317 aa12□□□□□ -0.49
USP46-209ENST00000514536 VRK1Q99986 396 aaPredicted RBP12□□□□□ -0.49
USP46-209ENST00000514536 KCNG2Q9UJ96 466 aa12□□□□□ -0.49
USP46-209ENST00000514536 GRIP1Q9Y3R0 1128 aa12□□□□□ -0.49
USP46-209ENST00000514536 COMMD3-BMI1R4GMX3 469 aa12□□□□□ -0.49
USP46-209ENST00000514536 ARID1AO14497 2285 aa11.99□□□□□ -0.49
USP46-209ENST00000514536 ZAR1LA6NP61 321 aa11.99□□□□□ -0.49
USP46-209ENST00000514536 H7C417 338 aa11.99□□□□□ -0.49
USP46-209ENST00000514536 GLCEO94923 617 aa11.99□□□□□ -0.49
USP46-209ENST00000514536 ABHD16AO95870 558 aa11.99□□□□□ -0.49
USP46-209ENST00000514536 DBHP09172 617 aa11.99□□□□□ -0.49
USP46-209ENST00000514536 SPARCP09486 303 aa11.99□□□□□ -0.49
USP46-209ENST00000514536 ENTPD1P49961 510 aa11.99□□□□□ -0.49
USP46-209ENST00000514536 BLVRAP53004 296 aa11.99□□□□□ -0.49
USP46-209ENST00000514536 KLHL12Q53G59 568 aa11.99□□□□□ -0.49
USP46-209ENST00000514536 SLX4IPQ5VYV7 408 aa11.99□□□□□ -0.49
USP46-209ENST00000514536 ARL9Q6T311 187 aa11.99□□□□□ -0.49
USP46-209ENST00000514536 PRSS57Q6UWY2 283 aa11.99□□□□□ -0.49
USP46-209ENST00000514536 UNQ6126/PRO20091Q6UXV3 157 aa11.99□□□□□ -0.49
USP46-209ENST00000514536 CXXC5Q7LFL8 322 aaKnown RBP11.99□□□□□ -0.49
USP46-209ENST00000514536 TGIF2LYQ8IUE0 185 aa11.99□□□□□ -0.49
USP46-209ENST00000514536 PQLC1Q8N2U9 271 aa11.99□□□□□ -0.49
USP46-209ENST00000514536 ABHD4Q8TB40 342 aa11.99□□□□□ -0.49
USP46-209ENST00000514536 ZMYND19Q96E35 227 aaPredicted RBP11.99□□□□□ -0.49
USP46-209ENST00000514536 RIBC2Q9H4K1 309 aa11.99□□□□□ -0.49
USP46-209ENST00000514536 ELOVL3Q9HB03 270 aa11.99□□□□□ -0.49
USP46-209ENST00000514536 MYEF2Q9P2K5 600 aaKnown RBP11.99□□□□□ -0.49
USP46-209ENST00000514536 ENOPH1Q9UHY7 261 aa11.99□□□□□ -0.49
USP46-209ENST00000514536 EI24O14681 340 aa11.98□□□□□ -0.49
USP46-209ENST00000514536 PRKYO43930 277 aa11.98□□□□□ -0.49
USP46-209ENST00000514536 CLPTM1O96005 669 aa11.98□□□□□ -0.49
USP46-209ENST00000514536 PSKH1P11801 424 aa11.98□□□□□ -0.49
USP46-209ENST00000514536 GSTT1P30711 240 aa11.98□□□□□ -0.49
USP46-209ENST00000514536 EVX1P49640 407 aa11.98□□□□□ -0.49
USP46-209ENST00000514536 RIPPLY3P57055 190 aa11.98□□□□□ -0.49
USP46-209ENST00000514536 SPATA46Q5T0L3 261 aa11.98□□□□□ -0.49
USP46-209ENST00000514536 C12orf73Q69YU5 71 aa11.98□□□□□ -0.49
USP46-209ENST00000514536 RFPL4BQ6ZWI9 263 aa11.98□□□□□ -0.49
USP46-209ENST00000514536 ZCCHC24Q8N2G6 241 aaKnown RBP11.98□□□□□ -0.49
USP46-209ENST00000514536 CBR4Q8N4T8 237 aa11.98□□□□□ -0.49
USP46-209ENST00000514536 BBS1Q8NFJ9 593 aa11.98□□□□□ -0.49
USP46-209ENST00000514536 SYNPRQ8TBG9 265 aa11.98□□□□□ -0.49
USP46-209ENST00000514536 MAP6Q96JE9 813 aa11.98□□□□□ -0.49
USP46-209ENST00000514536 COQ7Q99807 217 aa11.98□□□□□ -0.49
USP46-209ENST00000514536 HDHD2Q9H0R4 259 aa11.98□□□□□ -0.49
USP46-209ENST00000514536 ATPIF1Q9UII2 106 aa11.98□□□□□ -0.49
USP46-209ENST00000514536 M0R129 80 aa11.97□□□□□ -0.49
USP46-209ENST00000514536 TLX2O43763 284 aaPredicted RBP11.97□□□□□ -0.49
USP46-209ENST00000514536 SSX4O60224 188 aa11.97□□□□□ -0.49
USP46-209ENST00000514536 ICMTO60725 284 aa11.97□□□□□ -0.49
USP46-209ENST00000514536 ALPLP05186 524 aa11.97□□□□□ -0.49
USP46-209ENST00000514536 ADRA2AP08913 450 aa11.97□□□□□ -0.49
USP46-209ENST00000514536 ZNF250P15622 560 aa11.97□□□□□ -0.49
USP46-209ENST00000514536 SELENOVP59797 346 aa11.97□□□□□ -0.49
USP46-209ENST00000514536 RPS7P62081 194 aaKnown RBP11.97□□□□□ -0.49
USP46-209ENST00000514536 PPP1CBP62140 327 aa11.97□□□□□ -0.49
USP46-209ENST00000514536 MAD2L1BPQ15013 274 aaPredicted RBP11.97□□□□□ -0.49
USP46-209ENST00000514536 RSPO1Q2MKA7 263 aaPredicted RBP11.97□□□□□ -0.49
USP46-209ENST00000514536 ALKBH6Q3KRA9 238 aa11.97□□□□□ -0.49
USP46-209ENST00000514536 ZNF718Q3SXZ3 478 aa11.97□□□□□ -0.49
USP46-209ENST00000514536 TEX30Q5JUR7 227 aa11.97□□□□□ -0.49
USP46-209ENST00000514536 DCXRQ7Z4W1 244 aa11.97□□□□□ -0.49
USP46-209ENST00000514536 ERI1Q8IV48 349 aaKnown RBP11.97□□□□□ -0.49
USP46-209ENST00000514536 TCEANCQ8N8B7 351 aa11.97□□□□□ -0.49
USP46-209ENST00000514536 SLC25A40Q8TBP6 338 aa11.97□□□□□ -0.49
USP46-209ENST00000514536 MARS2Q96GW9 593 aaKnown RBP11.97□□□□□ -0.49
USP46-209ENST00000514536 Q96MF0 132 aa11.97□□□□□ -0.49
USP46-209ENST00000514536 INTS14Q96SY0 518 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms