RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 CD22P20273 847 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 GZMMP51124 257 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 SLC22A6Q4U2R8 563 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 SYT9Q86SS6 491 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 FAM71E2Q8N5Q1 922 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 LRRC61Q9BV99 259 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 ST6GALNAC5Q9BVH7 336 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 OR51M1Q9H341 326 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 SPACA1Q9HBV2 294 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 DUSP22Q9NRW4 184 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 RHBDD3Q9Y3P4 386 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 COL11A1P12107 1806 aaPredicted RBP11.96□□□□□ -0.49
TCOF1-213ENST00000514442 LANCL1O43813 399 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 LIMS3P0CW19 117 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 LIMS4P0CW20 117 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 MPPED2Q15777 294 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 C21orf62-AS1Q17RA5 79 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 PRR18Q8N4B5 295 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 OR13C5Q8NGS8 318 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 RXFP4Q8TDU9 374 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 RSPRY1Q96DX4 576 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 GPATCH2Q9NW75 528 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 A0A087WUU8 490 aa11.96□□□□□ -0.5
TCOF1-213ENST00000514442 SPTY2D1-AS1A0A0U1RR47 76 aa11.96□□□□□ -0.5
TCOF1-213ENST00000514442 OR6C68A6NDL8 312 aa11.96□□□□□ -0.5
TCOF1-213ENST00000514442 BTBD17A6NE02 478 aa11.96□□□□□ -0.5
TCOF1-213ENST00000514442 MT-ND4LP03901 98 aa11.96□□□□□ -0.5
TCOF1-213ENST00000514442 GABRR1P24046 479 aa11.96□□□□□ -0.5
TCOF1-213ENST00000514442 G0S2P27469 103 aa11.96□□□□□ -0.5
TCOF1-213ENST00000514442 CSRP3P50461 194 aa11.96□□□□□ -0.5
TCOF1-213ENST00000514442 FXYD4P59646 89 aa11.96□□□□□ -0.5
TCOF1-213ENST00000514442 ELAVL1Q15717 326 aaKnown RBP11.96□□□□□ -0.5
TCOF1-213ENST00000514442 TMEM244Q5VVB8 128 aa11.96□□□□□ -0.5
TCOF1-213ENST00000514442 C11orf87Q6NUJ2 197 aa11.96□□□□□ -0.5
TCOF1-213ENST00000514442 BCORP1Q8N888 145 aa11.96□□□□□ -0.5
TCOF1-213ENST00000514442 GCDHQ92947 438 aaPredicted RBP11.96□□□□□ -0.5
TCOF1-213ENST00000514442 CNRIP1Q96F85 164 aaPredicted RBP11.96□□□□□ -0.5
TCOF1-213ENST00000514442 UTP23Q9BRU9 249 aaKnown RBP11.96□□□□□ -0.5
TCOF1-213ENST00000514442 SLCO5A1Q9H2Y9 848 aa11.96□□□□□ -0.5
TCOF1-213ENST00000514442 LSM2Q9Y333 95 aaKnown RBP11.96□□□□□ -0.5
TCOF1-213ENST00000514442 IDSB3KWA1 339 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 RNASEK-C17orf49H0YIS7 233 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 DCTN6O00399 190 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 SLC2A10O95528 541 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 CXCL2P19875 107 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 ARHGAP11BQ3KRB8 267 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 NHLRC3Q5JS37 347 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 FNDC9Q8TBE3 224 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 TOMM40LQ969M1 308 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 PIGQQ9BRB3 760 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 TWSG1Q9GZX9 223 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 OR10A2Q9H208 303 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 NXT1Q9UKK6 140 aaKnown RBP11.95□□□□□ -0.5
TCOF1-213ENST00000514442 AP4M1O00189 453 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 CNOT4O95628 575 aaKnown RBP11.95□□□□□ -0.5
TCOF1-213ENST00000514442 SCGB1D1O95968 90 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 SERPINA5P05154 406 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 NID1P14543 1247 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 RAB4AP20338 218 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 WNT3P56703 355 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 TMEM92Q6UXU6 159 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 TFAP2EQ6VUC0 442 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 Q96M85 177 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 EXOSC3Q9NQT5 275 aaKnown RBP11.95□□□□□ -0.5
TCOF1-213ENST00000514442 KLHL13Q9P2N7 655 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 PPIL1Q9Y3C6 166 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 UMAD1C9J7I0 102 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 NSA2O95478 260 aaKnown RBP11.95□□□□□ -0.5
TCOF1-213ENST00000514442 KNG1P01042 644 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 CD46P15529 392 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 TAGLN2P37802 199 aaKnown RBP11.95□□□□□ -0.5
TCOF1-213ENST00000514442 AKR1C3P42330 323 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 SLC9A3R2Q15599 337 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 SPEM1Q8N4L4 309 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 SIRT6Q8N6T7 355 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 TEAD3Q99594 435 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 NRTNQ99748 197 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 TMPRSS13Q9BYE2 586 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 IGLV3-16A0A075B6K0 115 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 A0A0B4J293 547 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 TMEM235A6NFC5 223 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 SELENOFO60613 162 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 MRPL33O75394 65 aaKnown RBP11.95□□□□□ -0.5
TCOF1-213ENST00000514442 MPEG1Q2M385 716 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 C10orf111Q8N326 155 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 PLPP5Q8NEB5 264 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 STT3BQ8TCJ2 826 aa11.95□□□□□ -0.5
TCOF1-213ENST00000514442 IFITM5A6NNB3 132 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 GSTZ1O43708 216 aaPredicted RBP11.94□□□□□ -0.5
TCOF1-213ENST00000514442 LY86O95711 162 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 IGF2P01344 180 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 CDK5Q00535 292 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 PJVKQ0ZLH3 352 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 LRRTM1Q86UE6 522 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 ETFBKMTQ8IXQ9 262 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 OR5D14Q8NGL3 314 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 OR1J2Q8NGS2 313 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 HAS2Q92819 552 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 SLAMF9Q96A28 289 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 SUCNR1Q9BXA5 334 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms