RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 TFF3Q07654 80 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 EIF2B1Q14232 305 aaKnown RBP8.86□□□□□ -0.99
NEDD9-214ENST00000513989 ENDOGQ14249 297 aaKnown RBP8.86□□□□□ -0.99
NEDD9-214ENST00000513989 TAB1Q15750 504 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 SMN1Q16637 294 aaKnown RBP8.86□□□□□ -0.99
NEDD9-214ENST00000513989 MEP1BQ16820 701 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 PCK2Q16822 640 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 C3orf36Q3SXR2 165 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 ARL9Q6T311 187 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 UNQ6126/PRO20091Q6UXV3 157 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 KCTD20Q7Z5Y7 419 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 EGFL6Q8IUX8 553 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 SLC35F2Q8IXU6 374 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 OR10H4Q8NGA5 316 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 OTOSQ8NHW6 89 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 SNX33Q8WV41 574 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 GGHQ92820 318 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 SPTSSAQ969W0 71 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 LGALS12Q96DT0 336 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 FBXO17Q96EF6 278 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 WFIKKN1Q96NZ8 548 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 KCNS3Q9BQ31 491 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 MROQ9BYG7 248 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 OR2H1Q9GZK4 316 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 ADGRL4Q9HBW9 690 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 CENPMQ9NSP4 180 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 B3GNT2Q9NY97 397 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 PLEK2Q9NYT0 353 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 PSORS1C1Q9UIG5 152 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 GDF2Q9UK05 429 aaPredicted RBP8.86□□□□□ -0.99
NEDD9-214ENST00000513989 MYRFQ9Y2G1 1151 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 SPEF1Q9Y4P9 236 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 SLC25A15Q9Y619 301 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 COMMD3-BMI1R4GMX3 469 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 FLNAP21333 2647 aaKnown RBP8.86□□□□□ -0.99
NEDD9-214ENST00000513989 NAV3Q8IVL0 2385 aa8.86□□□□□ -0.99
NEDD9-214ENST00000513989 MPDZO75970 2070 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 VSTM5A8MXK1 200 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 RER1O15258 196 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 PATE4P0C8F1 98 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 COX5BP10606 129 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 EPXP11678 715 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 PIPP12273 146 aaPredicted RBP8.85□□□□□ -0.99
NEDD9-214ENST00000513989 ZNF32P17041 273 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 GDI2P50395 445 aaKnown RBP8.85□□□□□ -0.99
NEDD9-214ENST00000513989 PSG4Q00888 419 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 EGR3Q06889 387 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 ST3GAL4Q11206 333 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 TBC1D28Q2M2D7 210 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 PABPC1L2AQ5JQF8 200 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 ELFN2Q5R3F8 820 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 TMEM154Q6P9G4 183 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 CORO6Q6QEF8 472 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 DEGS2Q6QHC5 323 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 TMEM108Q6UXF1 575 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 TMPRSS11AQ6ZMR5 421 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 PLEKHG7Q6ZR37 379 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 DCXRQ7Z4W1 244 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 KRT77Q7Z794 578 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 MDP1Q86V88 176 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 CDC20BQ86Y33 519 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 OR4F15Q8NGB8 312 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 OR1F12Q8NHA8 337 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 LINC01560Q8TB33 94 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 FAM222BQ8WU58 562 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 COPS4Q9BT78 406 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 HDHD2Q9H0R4 259 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 ESRP2Q9H6T0 727 aaKnown RBP8.85□□□□□ -0.99
NEDD9-214ENST00000513989 SP140LQ9H930 580 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 FGF20Q9NP95 211 aaPredicted RBP8.85□□□□□ -0.99
NEDD9-214ENST00000513989 EIF3KQ9UBQ5 218 aaKnown RBP8.85□□□□□ -0.99
NEDD9-214ENST00000513989 EXOSC1Q9Y3B2 195 aaKnown RBP8.85□□□□□ -0.99
NEDD9-214ENST00000513989 LHFPL6Q9Y693 200 aa8.85□□□□□ -0.99
NEDD9-214ENST00000513989 PRRC2AP48634 2157 aaKnown RBP8.85□□□□□ -0.99
NEDD9-214ENST00000513989 ABCA4P78363 2273 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 A0A1W2PQL4 384 aaPredicted RBP8.84□□□□□ -0.99
NEDD9-214ENST00000513989 A0A1W2PR80 420 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 OR6C6A6NF89 314 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 M0R1B8 84 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 SLC1A7O00341 560 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 XPNPEP2O43895 674 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 DOK2O60496 412 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 MRPS14O60783 128 aaKnown RBP8.84□□□□□ -0.99
NEDD9-214ENST00000513989 ZNF254O75437 659 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 SULT1C4O75897 302 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 KRT8P05787 483 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 MMP7P09237 267 aaPredicted RBP8.84□□□□□ -0.99
NEDD9-214ENST00000513989 H2BFMP0C1H6 154 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 COX6B1P14854 86 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 ALOX5APP20292 161 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 CRHBPP24387 322 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 PTAFRP25105 342 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 STOMP27105 288 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 ACTA2P62736 377 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 GRB2P62993 217 aaKnown RBP8.84□□□□□ -0.99
NEDD9-214ENST00000513989 ACTG2P63267 376 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 HIST1H3AP68431 136 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 GALK2Q01415 458 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 DBPQ10586 325 aaPredicted RBP8.84□□□□□ -0.99
NEDD9-214ENST00000513989 RAB39AQ14964 217 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms