RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 HLA-DOBP13765 273 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 ZNF250P15622 560 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 STX2P32856 288 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 SOAT1P35610 550 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 MAGEA4P43358 317 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 CCT3P49368 545 aaKnown RBP3.95□□□□□ -1.78
HTT-211ENST00000513326 CLK1P49759 484 aaKnown RBP3.95□□□□□ -1.78
HTT-211ENST00000513326 SH3BGRP55822 239 aaPredicted RBP3.95□□□□□ -1.78
HTT-211ENST00000513326 KLF3P57682 345 aaPredicted RBP3.95□□□□□ -1.78
HTT-211ENST00000513326 KRTAP10-11P60412 298 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 RPL38P63173 70 aaKnown RBP3.95□□□□□ -1.78
HTT-211ENST00000513326 PRB3Q04118 309 aaPredicted RBP3.95□□□□□ -1.78
HTT-211ENST00000513326 ILF2Q12905 390 aaKnown RBP3.95□□□□□ -1.78
HTT-211ENST00000513326 SMN1Q16637 294 aaKnown RBP3.95□□□□□ -1.78
HTT-211ENST00000513326 IMPG1Q17R60 797 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 RFTN2Q52LD8 501 aaPredicted RBP3.95□□□□□ -1.78
HTT-211ENST00000513326 ENTPD8Q5MY95 495 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 PIK3CD-AS1Q5SR53 167 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 SERTAD4-AS1Q5TG53 156 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 PRAMEF8Q5VWM4 474 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 PRAMEF7Q5VXH5 474 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 REP15Q6BDI9 236 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 TMEM225Q6GV28 225 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 ZNF774Q6NX45 483 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 MZT2BQ6NZ67 158 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 FRRS1Q6ZNA5 592 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 ZNF620Q6ZNG0 422 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 CPLX4Q7Z7G2 160 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 ANKRD13BQ86YJ7 626 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 SKA3Q8IX90 412 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 C1orf174Q8IYL3 243 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 CLECL1Q8IZS7 167 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 KRTCAP2Q8N6L1 136 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 ICA1LQ8NDH6 482 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 TMEM170AQ8WVE7 144 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 DDB2Q92466 427 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 RAB1CQ92928 201 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 DDIT4LQ96D03 193 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 NEURL3Q96EH8 262 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 TIMD4Q96H15 378 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 ZNF317Q96PQ6 595 aaPredicted RBP3.95□□□□□ -1.78
HTT-211ENST00000513326 CCT7Q99832 543 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 EMC6Q9BV81 110 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 SEMA6AQ9H2E6 1030 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 TUBB1Q9H4B7 451 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 AAMDCQ9H7C9 122 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 PATZ1Q9HBE1 687 aaKnown RBP3.95□□□□□ -1.78
HTT-211ENST00000513326 PNRC2Q9NPJ4 139 aaKnown RBP3.95□□□□□ -1.78
HTT-211ENST00000513326 NRIP3Q9NQ35 241 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 SNTG1Q9NSN8 517 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 DECR2Q9NUI1 292 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 KIAA1456Q9P272 454 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 C11orf21Q9P2W6 132 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 ZNF346Q9UL40 294 aaKnown RBP3.95□□□□□ -1.78
HTT-211ENST00000513326 TMCO1Q9UM00 188 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 PCDHGB4Q9UN71 923 aa3.95□□□□□ -1.78
HTT-211ENST00000513326 FAF1Q9UNN5 650 aaPredicted RBP3.95□□□□□ -1.78
HTT-211ENST00000513326 A0A0U1RQK1 487 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 ZNF816-ZNF321PA0A0X1KG74 233 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 CEACAM18A8MTB9 384 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 EIF3HO15372 352 aaKnown RBP eCLIP3.94□□□□□ -1.78
HTT-211ENST00000513326 RAD51CO43502 376 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 NPIPB7O75200 414 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 ERLIN1O75477 346 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 STX11O75558 287 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 TGDSO95455 350 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 GPIP06744 558 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 GSTA2P09210 222 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 OR12D1P0DN82 309 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 IGLL1P15814 213 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 CBLP22681 906 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 POU1F1P28069 291 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 ANP32AP39687 249 aaKnown RBP3.94□□□□□ -1.78
HTT-211ENST00000513326 CENPAP49450 140 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 ZNF81P51508 661 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 MMP15P51511 669 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 PLTPP55058 493 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 PKNOX1P55347 436 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 FGF12P61328 243 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 RPS23P62266 143 aaKnown RBP3.94□□□□□ -1.78
HTT-211ENST00000513326 HBA1P69905 142 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 GALK2Q01415 458 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 EPS8Q12929 822 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 NAB1Q13506 487 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 PTGR1Q14914 329 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 TBCEQ15813 527 aaPredicted RBP3.94□□□□□ -1.78
HTT-211ENST00000513326 PCGF3Q3KNV8 242 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 ARHGAP11BQ3KRB8 267 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 C6orf10Q5SRN2 563 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 FAM201AQ5SY85 155 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 C1orf140Q5VVS0 124 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 AP1ARQ63HQ0 302 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 TNFAIP8L2Q6P589 184 aaPredicted RBP3.94□□□□□ -1.78
HTT-211ENST00000513326 WDR88Q6ZMY6 472 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 MOB3CQ70IA8 216 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 CCDC91Q7Z6B0 441 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 RNF130Q86XS8 419 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 LRRC8AQ8IWT6 810 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 PDZD9Q8IXQ8 264 aa3.94□□□□□ -1.78
HTT-211ENST00000513326 C20orf196Q8IYI0 205 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms