RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 THOC1Q96FV9 657 aaKnown RBP9.27□□□□□ -0.93
RNF4-218ENST00000513284 CGREF1Q99674 301 aa9.27□□□□□ -0.93
RNF4-218ENST00000513284 PCGF1Q9BSM1 259 aa9.27□□□□□ -0.93
RNF4-218ENST00000513284 MRPL13Q9BYD1 178 aaKnown RBP9.27□□□□□ -0.93
RNF4-218ENST00000513284 POLR2J2Q9GZM3 115 aaKnown RBP9.27□□□□□ -0.93
RNF4-218ENST00000513284 POLR2J3Q9H1A7 115 aaKnown RBP9.27□□□□□ -0.93
RNF4-218ENST00000513284 IKZF5Q9H5V7 419 aa9.27□□□□□ -0.93
RNF4-218ENST00000513284 VIPAS39Q9H9C1 493 aa9.27□□□□□ -0.93
RNF4-218ENST00000513284 CCNB1IP1Q9NPC3 277 aa9.27□□□□□ -0.93
RNF4-218ENST00000513284 ACOXLQ9NUZ1 547 aa9.27□□□□□ -0.93
RNF4-218ENST00000513284 CGGBP1Q9UFW8 167 aaPredicted RBP9.27□□□□□ -0.93
RNF4-218ENST00000513284 MIOXQ9UGB7 285 aa9.27□□□□□ -0.93
RNF4-218ENST00000513284 BAG5Q9UL15 447 aa9.27□□□□□ -0.93
RNF4-218ENST00000513284 SLC7A7Q9UM01 511 aa9.27□□□□□ -0.93
RNF4-218ENST00000513284 PPP1R3CQ9UQK1 317 aa9.27□□□□□ -0.93
RNF4-218ENST00000513284 A0A0U1RQK1 487 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 HMGB1P1B2RPK0 211 aaPredicted RBP9.26□□□□□ -0.93
RNF4-218ENST00000513284 BLOC1S5-TXNDC5H3BN57 136 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 K7EIL1 84 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 KPNA4O00629 521 aaPredicted RBP9.26□□□□□ -0.93
RNF4-218ENST00000513284 CYB5R3P00387 301 aaPredicted RBP9.26□□□□□ -0.93
RNF4-218ENST00000513284 IFNA14P01570 189 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 ASAH2BP0C7U1 165 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 RPS2P15880 293 aaKnown RBP9.26□□□□□ -0.93
RNF4-218ENST00000513284 ZNF32P17041 273 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 CDAP32320 146 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 CFHR2P36980 270 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 PMELP40967 661 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 RBM34P42696 430 aaKnown RBP9.26□□□□□ -0.93
RNF4-218ENST00000513284 MMP16P51512 607 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 MTPNP58546 118 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 TAS2R41P59536 307 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 DBPQ10586 325 aaPredicted RBP9.26□□□□□ -0.93
RNF4-218ENST00000513284 ZMAT1Q5H9K5 638 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 WDR25Q64LD2 544 aaPredicted RBP9.26□□□□□ -0.93
RNF4-218ENST00000513284 SLC35E4Q6ICL7 350 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 DLEU7Q6UYE1 221 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 PTOV1Q86YD1 416 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 LDLRAD3Q86YD5 345 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 MUC20Q8N307 709 aaPredicted RBP9.26□□□□□ -0.93
RNF4-218ENST00000513284 ZNF420Q8TAQ5 688 aaPredicted RBP9.26□□□□□ -0.93
RNF4-218ENST00000513284 ABHD4Q8TB40 342 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 CFHR4Q92496 578 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 SGCDQ92629 289 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 NABP1Q96AH0 204 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 NEIL1Q96FI4 390 aaPredicted RBP9.26□□□□□ -0.93
RNF4-218ENST00000513284 ZNF347Q96SE7 839 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 SEPHS2Q99611 448 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 SIKE1Q9BRV8 207 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 PCDHAC1Q9H158 963 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 INTS9Q9NV88 658 aaKnown RBP9.26□□□□□ -0.93
RNF4-218ENST00000513284 IL19Q9UHD0 177 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 SIGLEC9Q9Y336 463 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 UGT2A1Q9Y4X1 527 aa9.26□□□□□ -0.93
RNF4-218ENST00000513284 IGKV1D-43A0A0B4J1Z2 117 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 HTR3EA5X5Y0 456 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 IGF2P01344 180 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 MT-ND1P03886 318 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 ACADSP16219 412 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 TNFRSF1AP19438 455 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 ERFP50548 548 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 ZNF133P52736 654 aaPredicted RBP9.25□□□□□ -0.93
RNF4-218ENST00000513284 CYLC2Q14093 348 aaPredicted RBP9.25□□□□□ -0.93
RNF4-218ENST00000513284 HERPUD1Q15011 391 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 TAF11Q15544 211 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 ALDH16A1Q8IZ83 802 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 PIP4P2Q8N4L2 257 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 C11orf44Q8N8P7 122 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 GPR32P1Q8NGA4 272 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 OR10A6Q8NH74 314 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 PHF21AQ96BD5 680 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 SGTBQ96EQ0 304 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 MAGEB18Q96M61 343 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 WWC2-AS2Q96NR7 200 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 OR2V2Q96R30 315 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 ZNF426Q9BUY5 554 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 WNT5BQ9H1J7 359 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 KAT8Q9H7Z6 458 aaKnown RBP9.25□□□□□ -0.93
RNF4-218ENST00000513284 SIAEQ9HAT2 523 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 SMURF2Q9HAU4 748 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 INIPQ9NRY2 104 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 FOXJ3Q9UPW0 622 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 TENM2Q9NT68 2774 aa9.25□□□□□ -0.93
RNF4-218ENST00000513284 IGHV1-69DA0A0B4J2H0 117 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 NPIPB13A6NJU9 1138 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 NPIPB4C9JG80 1138 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 H3BSA7 217 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 P2RY10O00398 339 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 TIMM8AO60220 97 aaPredicted RBP9.24□□□□□ -0.93
RNF4-218ENST00000513284 TRMUO75648 421 aaKnown RBP9.24□□□□□ -0.93
RNF4-218ENST00000513284 SASH3O75995 380 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 OR7A10O76100 309 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 OR5F1O95221 314 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 MPIG6BO95866 241 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 IGHV1-69P01742 117 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 FUT1P19526 365 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 PITPNBP48739 271 aa9.24□□□□□ -0.93
RNF4-218ENST00000513284 GDI2P50395 445 aaKnown RBP9.24□□□□□ -0.93
RNF4-218ENST00000513284 RPL18Q07020 188 aaKnown RBP9.24□□□□□ -0.93
RNF4-218ENST00000513284 CD47Q08722 323 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms