RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 LRRC61Q9BV99 259 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 RASL12Q9NYN1 266 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 GPN3Q9UHW5 284 aaPredicted RBP8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 VSIG4Q9Y279 399 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 UNC13CQ8NB66 2214 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 TMEM269A0A1B0GVZ9 245 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 H0YIG0 161 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 ZNF823P16415 610 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 AKR1C4P17516 323 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 DLSTP36957 453 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 HYAL1Q12794 435 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 PPP1R1AQ13522 171 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 CCINQ13939 588 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 DMRTC1Q5HYR2 192 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 CLVS2Q5SYC1 327 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 DCXRQ7Z4W1 244 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 OR5M8Q8NGP6 311 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 ASB17Q8WXJ9 295 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 FGGYQ96C11 551 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 SPACA5Q96QH8 159 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 GLS2Q9UI32 602 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 AGTR1P30556 359 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 MC2RQ01718 297 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 PLCXD2Q0VAA5 305 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 C11orf87Q6NUJ2 197 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 JMJD6Q6NYC1 403 aaPredicted RBP8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 PAPD4Q6PIY7 484 aaKnown RBP8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 OR2W3Q7Z3T1 314 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 ADGRE4PQ86SQ3 457 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 CATSPERDQ86XM0 798 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 IQCF2Q8IXL9 164 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 KLHDC7BQ96G42 594 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 CYYR1Q96J86 154 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 C1orf198Q9H425 327 aa8.3□□□□□ -1.08
LIMCH1-215ENST00000512632 IL13RA1P78552 427 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 SGCBQ16585 318 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 FDX2Q6P4F2 183 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 FJX1Q86VR8 437 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 OR52N5Q8NH56 324 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 S1PR5Q9H228 398 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 TXNIPQ9H3M7 391 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 LANCL2Q9NS86 450 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 OR52A1Q9UKL2 312 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 A0A0D9SG52 128 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 WIPF3A6NGB9 483 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 ARRB1P49407 418 aaPredicted RBP8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 GLO1Q04760 184 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 OR7A5Q15622 319 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 NSDHLQ15738 373 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 C1orf140Q5VVS0 124 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 FAM219AQ8IW50 185 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 THAP3Q8WTV1 239 aaPredicted RBP8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 SLC25A32Q9H2D1 315 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 PDE7BQ9NP56 450 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 DNASE2O00115 360 aaPredicted RBP8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 UBBP0CG47 229 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 UBCP0CG48 685 aaKnown RBP8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 PGCP20142 388 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 PRKXP51817 358 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 EFNA3P52797 238 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 RPS27AP62979 156 aaKnown RBP8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 UBA52P62987 128 aaKnown RBP8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 C1orf189Q5VU69 101 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 TMEM88Q6PEY1 159 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 TRAPPC6BQ86SZ2 158 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 KCNRGQ8N5I3 272 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 ESX1Q8N693 406 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 ZNF519Q8TB69 540 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 LMX1AQ8TE12 382 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 ADIPOR1Q96A54 375 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 EMC6Q9BV81 110 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 SELENOIQ9C0D9 397 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 SLC17A5Q9NRA2 495 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 MED29Q9NX70 200 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 IGKV1D-43A0A0B4J1Z2 117 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 RNF222A6NCQ9 220 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 C5orf51A6NDU8 294 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 EIF4E2O60573 245 aaKnown RBP8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 AHSA1O95433 338 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 DDAH2O95865 285 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 ERCC1P07992 297 aaPredicted RBP8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 CD96P40200 585 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 SLC6A8P48029 635 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 ROM1Q03395 351 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 ELOCQ15369 112 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 FBXO46Q6PJ61 603 aaPredicted RBP8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 OR1S2Q8NGQ3 325 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 CNTD2Q9H8S5 307 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 TNFSF18Q9UNG2 199 aa8.29□□□□□ -1.08
LIMCH1-215ENST00000512632 WDR87Q6ZQQ6 2873 aa8.28□□□□□ -1.08
LIMCH1-215ENST00000512632 OPN1LWP04000 364 aa8.28□□□□□ -1.08
LIMCH1-215ENST00000512632 CNR1P21554 472 aa8.28□□□□□ -1.08
LIMCH1-215ENST00000512632 CAPZBP47756 277 aa8.28□□□□□ -1.08
LIMCH1-215ENST00000512632 Q6ZS52 159 aa8.28□□□□□ -1.08
LIMCH1-215ENST00000512632 C9orf40Q8IXQ3 194 aa8.28□□□□□ -1.08
LIMCH1-215ENST00000512632 ADAD2Q8NCV1 583 aaKnown RBP8.28□□□□□ -1.08
LIMCH1-215ENST00000512632 OR52N4Q8NGI2 321 aa8.28□□□□□ -1.08
LIMCH1-215ENST00000512632 THRSPQ92748 146 aa8.28□□□□□ -1.08
LIMCH1-215ENST00000512632 MARC2Q969Z3 335 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms