RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 CRISP1P54107 249 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 ATP5J2P56134 94 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 DSCR9P59020 149 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 KRTAP10-9P60411 292 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 CDC42P60953 191 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 RPS7P62081 194 aaKnown RBP6.48□□□□□ -1.37
NR1I3-231ENST00000512340 ADAM8P78325 824 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 TEKQ02763 1124 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 RELQ04864 619 aaPredicted RBP6.48□□□□□ -1.37
NR1I3-231ENST00000512340 TAF13Q15543 124 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 SNAPC1Q16533 368 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 ZNF718Q3SXZ3 478 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 ZMAT1Q5H9K5 638 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 METTL11BQ5VVY1 283 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 SIGIRRQ6IA17 410 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 RGS7BPQ6MZT1 257 aaPredicted RBP6.48□□□□□ -1.37
NR1I3-231ENST00000512340 FAHD1Q6P587 224 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 VHLLQ6RSH7 139 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 PRSS57Q6UWY2 283 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 SHFQ7M4L6 423 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 AMIGO2Q86SJ2 522 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 DTX2Q86UW9 622 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 ZBTB46Q86UZ6 589 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 NPEPL1Q8NDH3 523 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 SDR9C7Q8NEX9 313 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 OR6K6Q8NGW6 343 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 PYDC1Q8WXC3 89 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 LRTOMTQ8WZ04 291 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 SPTSSAQ969W0 71 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 UTP4Q969X6 686 aaKnown RBP6.48□□□□□ -1.37
NR1I3-231ENST00000512340 SLCO4A1Q96BD0 722 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 NIPSNAP1Q9BPW8 284 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 C9orf16Q9BUW7 83 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 ZNF416Q9BWM5 594 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 GSX2Q9BZM3 304 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 OR2H1Q9GZK4 316 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 RAB1BQ9H0U4 201 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 MS4A5Q9H3V2 200 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 PLK3Q9H4B4 646 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 NOX3Q9HBY0 568 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 MYOZ1Q9NP98 299 aaPredicted RBP6.48□□□□□ -1.37
NR1I3-231ENST00000512340 VNN3Q9NY84 501 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 ASH2LQ9UBL3 628 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 ZNF69Q9UC07 566 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 UGT2A1Q9Y4X1 527 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 COMMD3-BMI1R4GMX3 469 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 DCHS2Q6V1P9 2916 aa6.48□□□□□ -1.37
NR1I3-231ENST00000512340 A0A1W2PPW3 197 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 PLSCR5A0PG75 271 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 DPPA5A6NC42 116 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 E7EQL1 145 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 PRODHO43272 600 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 ATP6V1G2O95670 118 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 OR4A8P0C604 315 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 ZNF35P13682 527 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 CTRB1P17538 263 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 M6PRP20645 277 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 PRKACGP22612 351 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 APEX1P27695 318 aaKnown RBP6.47□□□□□ -1.37
NR1I3-231ENST00000512340 UCP2P55851 309 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 TPTEP56180 551 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 KLF3P57682 345 aaPredicted RBP6.47□□□□□ -1.37
NR1I3-231ENST00000512340 FXYD6P3P58550 94 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 NKX6-1P78426 367 aaPredicted RBP6.47□□□□□ -1.37
NR1I3-231ENST00000512340 PSG4Q00888 419 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 MALLQ13021 153 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 TESK1Q15569 626 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 EFNB3Q15768 340 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 SLC35D3Q5M8T2 416 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 ZNF362Q5T0B9 420 aaPredicted RBP6.47□□□□□ -1.37
NR1I3-231ENST00000512340 CTRB2Q6GPI1 263 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 KRT80Q6KB66 452 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 ZNF600Q6ZNG1 722 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 PTCHD4Q6ZW05 846 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.47□□□□□ -1.37
NR1I3-231ENST00000512340 SLC51BQ86UW2 128 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 OR6V1Q8N148 313 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 ZNF454Q8N9F8 522 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 SLC37A3Q8NCC5 494 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 CPEB3Q8NE35 698 aaKnown RBP6.47□□□□□ -1.37
NR1I3-231ENST00000512340 OR1F12Q8NHA8 337 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 SYNPRQ8TBG9 265 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 RFKQ969G6 155 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 NABP1Q96AH0 204 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 EME1Q96AY2 570 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 FBXO17Q96EF6 278 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 POM121Q96HA1 1249 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 PITX2Q99697 317 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 COQ7Q99807 217 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 TRAF4Q9BUZ4 470 aaPredicted RBP6.47□□□□□ -1.37
NR1I3-231ENST00000512340 GABARAPL1Q9H0R8 117 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 SEMA6AQ9H2E6 1030 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 FN3KQ9H479 309 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 SLC25A19Q9HC21 320 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 S100A14Q9HCY8 104 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 EMC7Q9NPA0 242 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 CYSLTR2Q9NS75 346 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 RHBDL2Q9NX52 303 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 IMPAD1Q9NX62 359 aa6.47□□□□□ -1.37
NR1I3-231ENST00000512340 TVP23BQ9NYZ1 205 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms