RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 TGS1Q96RS0 853 aaKnown RBP2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 SAV1Q9H4B6 383 aaPredicted RBP2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 GEMIN7Q9H840 131 aaKnown RBP2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 EDA2RQ9HAV5 297 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 ZDHHC4Q9NPG8 344 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 LYARQ9NX58 379 aaKnown RBP2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 ZNRD1Q9P1U0 126 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 DUX4Q9UBX2 424 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 TMEM14AQ9Y6G1 99 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 IGLV1-50A0A075B6I6 118 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 TMEM150BA6NC51 233 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 TEX46H3BTG2 121 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 DNALI1O14645 258 aaPredicted RBP2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 CHST1O43916 411 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 DNAJB6O75190 326 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 RP2O75695 350 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 CCNB2O95067 398 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 WISP3O95389 354 aaPredicted RBP2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 FGFR1OPO95684 399 aaKnown RBP2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 SERPINE2P07093 398 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 TPM2P07951 284 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 ERCC1P07992 297 aaPredicted RBP2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 RAB3AP20336 220 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 U2AF2P26368 475 aaKnown RBP eCLIP2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 SSTR5P35346 364 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 HCAR3P49019 387 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 MRPL19P49406 292 aaKnown RBP2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 P2RX1P51575 399 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 CDKN2DP55273 166 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 PPP1CBP62140 327 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 SYCNQ0VAF6 134 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 ZNF266Q14584 549 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 XKR4Q5GH76 650 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 BZW1Q7L1Q6 419 aaKnown RBP2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 SNX20Q7Z614 316 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 LGI3Q8N145 548 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 GABRG1Q8N1C3 465 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 CBR4Q8N4T8 237 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 C15orf56Q8N910 161 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 SNX31Q8N9S9 440 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 TTC29Q8NA56 475 aaPredicted RBP2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 CHST4Q8NCG5 386 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 OR51E1Q8TCB6 317 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 PIFOQ8TCI5 191 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 SEH1LQ96EE3 360 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 TIMM17AQ99595 171 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 ACTR3CQ9C0K3 210 aaPredicted RBP2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 NEUROG2Q9H2A3 272 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 CCNB1IP1Q9NPC3 277 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 AGPAT4Q9NRZ5 378 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 GPATCH8Q9UKJ3 1502 aaKnown RBP2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 IGSF9BQ9UPX0 1349 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 SLC17A4Q9Y2C5 497 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 HYOU1Q9Y4L1 999 aa2.04□□□□□ -2.08
TRAPPC11-207ENST00000511409 NUP214P35658 2090 aaPredicted RBP2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 NSD2O96028 1365 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 IGLV1-36A0A0B4J1U3 117 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 TRBV9A0A0B4J1U6 114 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 TMEM223A0PJW6 202 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 WRBO00258 174 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 BET1O15155 118 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 RBFOX2O43251 390 aaKnown RBP eCLIP2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 RAD51CO43502 376 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 OR2F2O95006 317 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 CISD3P0C7P0 127 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 ERGP11308 486 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 OR1E1P30953 314 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 RAB7AP51149 207 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 IFT88Q13099 833 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 ABCA11PQ4W5N1 156 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 C5orf47Q569G3 176 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 ZNF684Q5T5D7 378 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 UBE2UQ5VVX9 321 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 SSX9Q7RTT3 188 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 OR5K2Q8NHB8 316 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 MRGPRFQ96AM1 343 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 GALNT14Q96FL9 552 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 XPO6Q96QU8 1125 aaKnown RBP2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 CAMK2N2Q96S95 79 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 BPIFA3Q9BQP9 254 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 C11orf70Q9BRQ4 267 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 UBE2ZQ9H832 354 aaPredicted RBP2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 TMEM165Q9HC07 324 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 WFDC1Q9HC57 220 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 SIRT7Q9NRC8 400 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 C20orf96Q9NUD7 363 aaPredicted RBP2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 DDX19AQ9NUU7 478 aaKnown RBP2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 MTCH1Q9NZJ7 389 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 ZNF282Q9UDV7 671 aaPredicted RBP2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 PCM1Q15154 2024 aa2.03□□□□□ -2.08
TRAPPC11-207ENST00000511409 SLIT3O75094 1523 aa2.02□□□□□ -2.09
TRAPPC11-207ENST00000511409 TRAV19A0A0A6YYK7 116 aa2.02□□□□□ -2.09
TRAPPC11-207ENST00000511409 SYCE1LA8MT33 242 aa2.02□□□□□ -2.09
TRAPPC11-207ENST00000511409 ZNF705GA8MUZ8 300 aaPredicted RBP2.02□□□□□ -2.09
TRAPPC11-207ENST00000511409 H7C0C1 242 aa2.02□□□□□ -2.09
TRAPPC11-207ENST00000511409 SCAMP2O15127 329 aaKnown RBP2.02□□□□□ -2.09
TRAPPC11-207ENST00000511409 NVLO15381 856 aaKnown RBP2.02□□□□□ -2.09
TRAPPC11-207ENST00000511409 FLOT1O75955 427 aa2.02□□□□□ -2.09
TRAPPC11-207ENST00000511409 LSM8O95777 96 aaKnown RBP2.02□□□□□ -2.09
TRAPPC11-207ENST00000511409 CT45A6P0DMU7 189 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms