RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 SUN5Q8TC36 379 aa4.53□□□□□ -1.68
GYPB-212ENST00000511198 NCLNQ969V3 563 aa4.53□□□□□ -1.68
GYPB-212ENST00000511198 TMEM19Q96HH6 336 aa4.53□□□□□ -1.68
GYPB-212ENST00000511198 UHRF2Q96PU4 802 aa4.53□□□□□ -1.68
GYPB-212ENST00000511198 TRIB3Q96RU7 358 aa4.53□□□□□ -1.68
GYPB-212ENST00000511198 RASL10BQ96S79 203 aa4.53□□□□□ -1.68
GYPB-212ENST00000511198 EPYCQ99645 322 aa4.53□□□□□ -1.68
GYPB-212ENST00000511198 GON7Q9BXV9 100 aa4.53□□□□□ -1.68
GYPB-212ENST00000511198 GABARAPL3Q9BY60 117 aa4.53□□□□□ -1.68
GYPB-212ENST00000511198 KCNN2Q9H2S1 579 aa4.53□□□□□ -1.68
GYPB-212ENST00000511198 RIBC2Q9H4K1 309 aa4.53□□□□□ -1.68
GYPB-212ENST00000511198 C3orf14Q9HBI5 128 aa4.53□□□□□ -1.68
GYPB-212ENST00000511198 POLE4Q9NR33 117 aa4.53□□□□□ -1.68
GYPB-212ENST00000511198 CBLN4Q9NTU7 201 aa4.53□□□□□ -1.68
GYPB-212ENST00000511198 FKBP14Q9NWM8 211 aa4.53□□□□□ -1.68
GYPB-212ENST00000511198 MARCH4Q9P2E8 410 aaPredicted RBP4.53□□□□□ -1.68
GYPB-212ENST00000511198 CLCF1Q9UBD9 225 aa4.53□□□□□ -1.68
GYPB-212ENST00000511198 GPR52Q9Y2T5 361 aa4.53□□□□□ -1.68
GYPB-212ENST00000511198 POLR3HQ9Y535 204 aaPredicted RBP4.53□□□□□ -1.68
GYPB-212ENST00000511198 KLK4Q9Y5K2 254 aa4.53□□□□□ -1.68
GYPB-212ENST00000511198 SCN3AQ9NY46 2000 aa4.53□□□□□ -1.68
GYPB-212ENST00000511198 DYNC1H1Q14204 4646 aaKnown RBP4.52□□□□□ -1.69
GYPB-212ENST00000511198 LOC390937A0A1W2PQ73 354 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 A8MUA0 341 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 SHISA9B4DS77 424 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 STX7O15400 261 aaKnown RBP4.52□□□□□ -1.69
GYPB-212ENST00000511198 OR4F21O95013 312 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 CRYZL1O95825 349 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 SERPINA1P01009 418 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 SEMG1P04279 462 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 CDK1P06493 297 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 MMP2P08253 660 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 G6PDP11413 515 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 IL7P13232 177 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 CPN1P15169 458 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 SPNP16150 400 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 ADRA2CP18825 462 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 ACADLP28330 430 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 RRM2P31350 389 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 PCGF2P35227 344 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 LSM3P62310 102 aaKnown RBP4.52□□□□□ -1.69
GYPB-212ENST00000511198 BSPH1Q075Z2 132 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 CSTF3Q12996 717 aaKnown RBP4.52□□□□□ -1.69
GYPB-212ENST00000511198 DGCR6Q14129 220 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 TSNQ15631 228 aaKnown RBP4.52□□□□□ -1.69
GYPB-212ENST00000511198 CARTPTQ16568 116 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 EXOC3L2Q2M3D2 409 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 YIF1BQ5BJH7 314 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 ARMCX4Q5H9R4 360 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 SIRPB2Q5JXA9 342 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 OLFML2AQ68BL7 652 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 TIGD3Q6B0B8 471 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 FAHD2BQ6P2I3 314 aaPredicted RBP4.52□□□□□ -1.69
GYPB-212ENST00000511198 WDR73Q6P4I2 378 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 FAHD1Q6P587 224 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 GDPGP1Q6ZNW5 385 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 Q6ZSR9 355 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 ZNF767PQ75MW2 155 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 GDPD3Q7L5L3 318 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.52□□□□□ -1.69
GYPB-212ENST00000511198 ADAMTSL2Q86TH1 951 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 RNF130Q86XS8 419 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 SNX29P2Q8IUI4 249 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 C1orf52Q8N6N3 182 aaKnown RBP4.52□□□□□ -1.69
GYPB-212ENST00000511198 CSNK1A1LQ8N752 337 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 FAM86B1Q8N7N1 296 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 FAM83FQ8NEG4 500 aaPredicted RBP4.52□□□□□ -1.69
GYPB-212ENST00000511198 OR4L1Q8NH43 312 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 OR10A6Q8NH74 314 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 GTF2H4Q92759 462 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 TMEM186Q96B77 213 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 PHF21AQ96BD5 680 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 FAM120BQ96EK7 910 aaKnown RBP4.52□□□□□ -1.69
GYPB-212ENST00000511198 FAHD2AQ96GK7 314 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 ITCHQ96J02 903 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 CEP19Q96LK0 163 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 WDFY2Q96P53 400 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 COPS4Q9BT78 406 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 THUMPD3Q9BV44 507 aaKnown RBP4.52□□□□□ -1.69
GYPB-212ENST00000511198 DPY30Q9C005 99 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 POLR1EQ9GZS1 481 aaKnown RBP4.52□□□□□ -1.69
GYPB-212ENST00000511198 C6orf62Q9GZU0 229 aaPredicted RBP4.52□□□□□ -1.69
GYPB-212ENST00000511198 REEP1Q9H902 201 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 IL1RAPQ9NPH3 570 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 KRT84Q9NSB2 600 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 NLE1Q9NVX2 485 aaPredicted RBP4.52□□□□□ -1.69
GYPB-212ENST00000511198 TAS2R9Q9NYW1 312 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 CD274Q9NZQ7 290 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 VAPAQ9P0L0 249 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 ENOPH1Q9UHY7 261 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 PSORS1C1Q9UIG5 152 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 TRMT6Q9UJA5 497 aaKnown RBP4.52□□□□□ -1.69
GYPB-212ENST00000511198 CRYL1Q9Y2S2 319 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 TIMM22Q9Y584 194 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 N6AMT1Q9Y5N5 214 aa4.52□□□□□ -1.69
GYPB-212ENST00000511198 WI2-2373I1.2A0A1W2PRP0 233 aa4.51□□□□□ -1.69
GYPB-212ENST00000511198 B4DSR2 109 aa4.51□□□□□ -1.69
GYPB-212ENST00000511198 E7EQL1 145 aa4.51□□□□□ -1.69
GYPB-212ENST00000511198 GFYI3L273 518 aa4.51□□□□□ -1.69
GYPB-212ENST00000511198 WWP2O00308 870 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms