RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 ZNF7P17097 686 aaPredicted RBP3□□□□□ -1.93
NUP54-209ENST00000510569 PSMB1P20618 241 aaKnown RBP3□□□□□ -1.93
NUP54-209ENST00000510569 CD82P27701 267 aa3□□□□□ -1.93
NUP54-209ENST00000510569 TEAD1P28347 426 aa3□□□□□ -1.93
NUP54-209ENST00000510569 UGT1A3P35503 534 aa3□□□□□ -1.93
NUP54-209ENST00000510569 CYLC1P35663 651 aaPredicted RBP3□□□□□ -1.93
NUP54-209ENST00000510569 SERPINB8P50452 374 aa3□□□□□ -1.93
NUP54-209ENST00000510569 DUSP3P51452 185 aaPredicted RBP3□□□□□ -1.93
NUP54-209ENST00000510569 ACLYP53396 1101 aa3□□□□□ -1.93
NUP54-209ENST00000510569 PLA2G16P53816 162 aa3□□□□□ -1.93
NUP54-209ENST00000510569 KCNK10P57789 538 aa3□□□□□ -1.93
NUP54-209ENST00000510569 HERVK_113P63132 956 aa3□□□□□ -1.93
NUP54-209ENST00000510569 ERVK-25P63136 954 aa3□□□□□ -1.93
NUP54-209ENST00000510569 LCN2P80188 198 aa3□□□□□ -1.93
NUP54-209ENST00000510569 TMED2Q15363 201 aa3□□□□□ -1.93
NUP54-209ENST00000510569 CYTH1Q15438 398 aa3□□□□□ -1.93
NUP54-209ENST00000510569 IL17AQ16552 155 aa3□□□□□ -1.93
NUP54-209ENST00000510569 IMPG1Q17R60 797 aa3□□□□□ -1.93
NUP54-209ENST00000510569 EXOC3L4Q17RC7 722 aa3□□□□□ -1.93
NUP54-209ENST00000510569 MS4A13Q5J8X5 152 aa3□□□□□ -1.93
NUP54-209ENST00000510569 OR5M10Q6IEU7 315 aa3□□□□□ -1.93
NUP54-209ENST00000510569 ULK3Q6PHR2 472 aa3□□□□□ -1.93
NUP54-209ENST00000510569 DPY19L4Q7Z388 723 aa3□□□□□ -1.93
NUP54-209ENST00000510569 GOLGA7Q7Z5G4 137 aa3□□□□□ -1.93
NUP54-209ENST00000510569 CRLF3Q8IUI8 442 aa3□□□□□ -1.93
NUP54-209ENST00000510569 OR2L8Q8NGY9 312 aa3□□□□□ -1.93
NUP54-209ENST00000510569 TFB1MQ8WVM0 346 aaKnown RBP3□□□□□ -1.93
NUP54-209ENST00000510569 RNF133Q8WVZ7 376 aa3□□□□□ -1.93
NUP54-209ENST00000510569 PIH1D2Q8WWB5 315 aa3□□□□□ -1.93
NUP54-209ENST00000510569 PYDC1Q8WXC3 89 aa3□□□□□ -1.93
NUP54-209ENST00000510569 FAM3CQ92520 227 aa3□□□□□ -1.93
NUP54-209ENST00000510569 P3H4Q92791 437 aa3□□□□□ -1.93
NUP54-209ENST00000510569 MRPL53Q96EL3 112 aaKnown RBP3□□□□□ -1.93
NUP54-209ENST00000510569 C9orf85Q96MD7 179 aa3□□□□□ -1.93
NUP54-209ENST00000510569 JSRP1Q96MG2 331 aaPredicted RBP3□□□□□ -1.93
NUP54-209ENST00000510569 P2RY13Q9BPV8 354 aa3□□□□□ -1.93
NUP54-209ENST00000510569 DPH7Q9BTV6 452 aa3□□□□□ -1.93
NUP54-209ENST00000510569 ERVK-6Q9BXR3 956 aa3□□□□□ -1.93
NUP54-209ENST00000510569 TRIM4Q9C037 500 aa3□□□□□ -1.93
NUP54-209ENST00000510569 LHX5Q9H2C1 402 aa3□□□□□ -1.93
NUP54-209ENST00000510569 PIGUQ9H490 435 aa3□□□□□ -1.93
NUP54-209ENST00000510569 ADGRL4Q9HBW9 690 aa3□□□□□ -1.93
NUP54-209ENST00000510569 POLD4Q9HCU8 107 aa3□□□□□ -1.93
NUP54-209ENST00000510569 MIEF1Q9NQG6 463 aa3□□□□□ -1.93
NUP54-209ENST00000510569 TAS2R9Q9NYW1 312 aa3□□□□□ -1.93
NUP54-209ENST00000510569 STMN3Q9NZ72 180 aa3□□□□□ -1.93
NUP54-209ENST00000510569 CLN8Q9UBY8 286 aa3□□□□□ -1.93
NUP54-209ENST00000510569 RNF6Q9Y252 685 aa3□□□□□ -1.93
NUP54-209ENST00000510569 STARD10Q9Y365 291 aa3□□□□□ -1.93
NUP54-209ENST00000510569 ALS2Q96Q42 1657 aa3□□□□□ -1.93
NUP54-209ENST00000510569 FLT4P35916 1363 aa3□□□□□ -1.93
NUP54-209ENST00000510569 PARP4Q9UKK3 1724 aaKnown RBP2.99□□□□□ -1.93
NUP54-209ENST00000510569 SLIT3O75094 1523 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 RREB1Q92766 1687 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 PXDNQ92626 1479 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 KRTAP4-16G5E9R7 235 aaPredicted RBP2.99□□□□□ -1.93
NUP54-209ENST00000510569 H3BN98 237 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 AQP9O43315 295 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 N4BP1O75113 896 aaKnown RBP2.99□□□□□ -1.93
NUP54-209ENST00000510569 OR2J3O76001 311 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 SCELO95171 688 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 ETHE1O95571 254 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 TXNDC12O95881 172 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 RPS17P08708 135 aaKnown RBP2.99□□□□□ -1.93
NUP54-209ENST00000510569 CT45A8P0DMV1 189 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 CT45A9P0DMV2 189 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 BGNP21810 368 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 CCNE1P24864 410 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 CFHR2P36980 270 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 SLC26A3P40879 764 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 RANBP1P43487 201 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 CAPZBP47756 277 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 RFX3P48380 749 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 ALDH3B2P48448 385 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 SPCS3P61009 180 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 CXCR4P61073 352 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 ERVK-8P63133 956 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 ZNF33AQ06730 810 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 EBI3Q14213 229 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 CHI3L2Q15782 390 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 MRPL23Q16540 153 aaKnown RBP2.99□□□□□ -1.93
NUP54-209ENST00000510569 CDKN3Q16667 212 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 GGTA1PQ4G0N0 100 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 AKIRIN2Q53H80 203 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 CT45A2Q5DJT8 189 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 TFDP3Q5H9I0 405 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 SLX4IPQ5VYV7 408 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 C3orf33Q6P1S2 294 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 PRMT9Q6P2P2 845 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 CD300LGQ6UXG3 332 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 APOOLQ6UXV4 268 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 ZNF562Q6V9R5 426 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 TMPRSS11AQ6ZMR5 421 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 DHDDSQ86SQ9 333 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 ZNF546Q86UE3 836 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 RANBP3LQ86VV4 465 aaPredicted RBP2.99□□□□□ -1.93
NUP54-209ENST00000510569 GPBP1Q86WP2 473 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 SYS1Q8N2H4 156 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 TRAM1L1Q8N609 369 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 LINC01555Q8NAE3 123 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms