RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 LINC00470Q9BZP3 86 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 TRIM15Q9C019 465 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 RPF2Q9H7B2 306 aaKnown RBP4.28□□□□□ -1.72
NEK1-204ENST00000509912 PLEKHF2Q9H8W4 249 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 CAB39LQ9H9S4 337 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 S100A14Q9HCY8 104 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 RNF6Q9Y252 685 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 TRAPPC4Q9Y296 219 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 DSPPQ9NZW4 1301 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 PDZD2O15018 2839 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 IGHV4-28A0A0C4DH34 117 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 A0A1B0GTH9 108 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 C17orf105B2RV13 164 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 E9PI62 339 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 NDUFS8O00217 210 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 PLPP1O14494 284 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 OR7A17O14581 309 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 CLOCKO15516 846 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 ZNF208O43345 1280 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 CDC40O60508 579 aaKnown RBP eCLIP4.28□□□□□ -1.72
NEK1-204ENST00000509912 HMGN1P05114 100 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 S100A12P80511 92 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 UGT3A2Q3SY77 523 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 LIN52Q52LA3 116 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 SLC25A24Q6NUK1 477 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 ENPP6Q6UWR7 440 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 C3P1Q6ZMU1 363 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 ZCCHC23Q6ZST2 131 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 C9orf40Q8IXQ3 194 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 ANKFN1Q8N957 763 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 ZNF383Q8NA42 475 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 FBXO30Q8TB52 745 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 SENP5Q96HI0 755 aaPredicted RBP4.28□□□□□ -1.72
NEK1-204ENST00000509912 SF3B5Q9BWJ5 86 aaKnown RBP4.28□□□□□ -1.72
NEK1-204ENST00000509912 SHARPINQ9H0F6 387 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 PNPLA3Q9NST1 481 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 MAT2BQ9NZL9 334 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 UBQLN2Q9UHD9 624 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 IFT52Q9Y366 437 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 APCP25054 2843 aa4.28□□□□□ -1.72
NEK1-204ENST00000509912 NCKAP5O14513 1909 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 A0A0G2JND7 137 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 SH3PXD2BA1X283 911 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 NKX2-6A6NCS4 301 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 NCF1BA6NI72 391 aaPredicted RBP4.27□□□□□ -1.73
NEK1-204ENST00000509912 NCF1CA8MVU1 366 aaPredicted RBP4.27□□□□□ -1.73
NEK1-204ENST00000509912 H0YJX3 145 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 RPL36A-HNRNPH2H7BZ11 118 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 GLRA3O75311 464 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 S100A9P06702 114 aaKnown RBP4.27□□□□□ -1.73
NEK1-204ENST00000509912 NQO1P15559 274 aaKnown RBP4.27□□□□□ -1.73
NEK1-204ENST00000509912 ACADSP16219 412 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 PAICSP22234 425 aaKnown RBP4.27□□□□□ -1.73
NEK1-204ENST00000509912 CPN2P22792 545 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 KCNJ2P63252 427 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 IRF8Q02556 426 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 CHI3L2Q15782 390 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 ZNF678Q5SXM1 525 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 LIPKQ5VXJ0 399 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 GLCCI1Q86VQ1 547 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 PLCZ1Q86YW0 608 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 NUDCD3Q8IVD9 361 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 SLC30A8Q8IWU4 369 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 LGALS12Q96DT0 336 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 OMA1Q96E52 524 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 MRPL53Q96EL3 112 aaKnown RBP4.27□□□□□ -1.73
NEK1-204ENST00000509912 TMEM19Q96HH6 336 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 POTEKPQ9BYX7 375 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 ZNF275Q9NSD4 429 aaPredicted RBP4.27□□□□□ -1.73
NEK1-204ENST00000509912 SLCO1C1Q9NYB5 712 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 POU2F3Q9UKI9 436 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 MRPS7Q9Y2R9 242 aaKnown RBP4.27□□□□□ -1.73
NEK1-204ENST00000509912 CENPEQ02224 2701 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 IGLV5-39A0A0G2JS06 123 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 TRBV11-1A0A0K0K1C0 115 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 ZNF860A6NHJ4 632 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 ZNF98A6NK75 572 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 LINC00587B1AMM8 73 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 WNT9BO14905 357 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 ZNHIT1O43257 154 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 ARHGEF9O43307 516 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 TLX2O43763 284 aaPredicted RBP4.27□□□□□ -1.73
NEK1-204ENST00000509912 RPS4Y1P22090 263 aaKnown RBP4.27□□□□□ -1.73
NEK1-204ENST00000509912 SLC6A8P48029 635 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 EMDP50402 254 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 LHX2P50458 406 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 FUT6P51993 359 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 ZNF133P52736 654 aaPredicted RBP4.27□□□□□ -1.73
NEK1-204ENST00000509912 IFITM2Q01629 132 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 PLGLB1Q02325 96 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 LGALS3BPQ08380 585 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 BST1Q10588 318 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 ZNF155Q12901 538 aaPredicted RBP4.27□□□□□ -1.73
NEK1-204ENST00000509912 CHIT1Q13231 466 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 KIAA0040Q15053 153 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 OR4D1Q15615 310 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 VPS26BQ4G0F5 336 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 XKR7Q5GH72 579 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 BHLHB9Q6PI77 547 aa4.27□□□□□ -1.73
NEK1-204ENST00000509912 FRA10AC1Q70Z53 315 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms