RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 MSL2Q9HCI7 577 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 SRA1Q9HD15 236 aaKnown RBP15.22■□□□□ 0.03
TPM3-220ENST00000509601 CYSLTR2Q9NS75 346 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 PLEK2Q9NYT0 353 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 GRIP1Q9Y3R0 1128 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 PLSCR5A0PG75 271 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 RER1O15258 196 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 TPD52L2O43399 206 aaKnown RBP15.21■□□□□ 0.03
TPM3-220ENST00000509601 OR10H3O60404 316 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 UBOX5O94941 541 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 ABHD16AO95870 558 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 CD55P08174 381 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 TUBG1P23258 451 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 SLC6A6P31641 620 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 CDK5R2Q13319 367 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 RSPO1Q2MKA7 263 aaPredicted RBP15.21■□□□□ 0.03
TPM3-220ENST00000509601 KRTAP24-1Q3LI83 254 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 MTX3Q5HYI7 312 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 OR4K13Q8NH42 304 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 OR1F12Q8NHA8 337 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 TMEM186Q96B77 213 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 HAVCR1Q96D42 359 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 CMBLQ96DG6 245 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 ELMOD3Q96FG2 381 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 SAMD8Q96LT4 415 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 CCT8L2Q96SF2 557 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 NMNAT3Q96T66 252 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 LPAR2Q9HBW0 351 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 TUBG2Q9NRH3 451 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 HIF1ANQ9NWT6 349 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 WIPI2Q9Y4P8 454 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 LHFPL6Q9Y693 200 aa15.21■□□□□ 0.03
TPM3-220ENST00000509601 B2RBV5 119 aa15.2■□□□□ 0.02
TPM3-220ENST00000509601 DEAF1O75398 565 aaPredicted RBP15.2■□□□□ 0.02
TPM3-220ENST00000509601 MSMBP08118 114 aa15.2■□□□□ 0.02
TPM3-220ENST00000509601 DBHP09172 617 aa15.2■□□□□ 0.02
TPM3-220ENST00000509601 HIST1H1CP16403 213 aaKnown RBP15.2■□□□□ 0.02
TPM3-220ENST00000509601 KITLGP21583 273 aa15.2■□□□□ 0.02
TPM3-220ENST00000509601 CRABP1P29762 137 aa15.2■□□□□ 0.02
TPM3-220ENST00000509601 HNRNPA0Q13151 305 aaKnown RBP15.2■□□□□ 0.02
TPM3-220ENST00000509601 MEP1BQ16820 701 aa15.2■□□□□ 0.02
TPM3-220ENST00000509601 HFEQ30201 348 aa15.2■□□□□ 0.02
TPM3-220ENST00000509601 PGBD2Q6P3X8 592 aa15.2■□□□□ 0.02
TPM3-220ENST00000509601 LEG1Q6P5S2 330 aa15.2■□□□□ 0.02
TPM3-220ENST00000509601 Q6ZR03 302 aa15.2■□□□□ 0.02
TPM3-220ENST00000509601 GLCCI1Q86VQ1 547 aa15.2■□□□□ 0.02
TPM3-220ENST00000509601 ZDHHC21Q8IVQ6 265 aa15.2■□□□□ 0.02
TPM3-220ENST00000509601 FANK1Q8TC84 345 aa15.2■□□□□ 0.02
TPM3-220ENST00000509601 GNPDA2Q8TDQ7 276 aa15.2■□□□□ 0.02
TPM3-220ENST00000509601 CCL17Q92583 94 aa15.2■□□□□ 0.02
TPM3-220ENST00000509601 PTP4A1Q93096 173 aa15.2■□□□□ 0.02
TPM3-220ENST00000509601 NSL1Q96IY1 281 aa15.2■□□□□ 0.02
TPM3-220ENST00000509601 DDOQ99489 341 aa15.2■□□□□ 0.02
TPM3-220ENST00000509601 ZNF665Q9H7R5 613 aa15.2■□□□□ 0.02
TPM3-220ENST00000509601 NDE1Q9NXR1 346 aa15.2■□□□□ 0.02
TPM3-220ENST00000509601 CGGBP1Q9UFW8 167 aaPredicted RBP15.2■□□□□ 0.02
TPM3-220ENST00000509601 PURGQ9UJV8 347 aaKnown RBP15.2■□□□□ 0.02
TPM3-220ENST00000509601 ZDHHC8Q9ULC8 765 aa15.2■□□□□ 0.02
TPM3-220ENST00000509601 WNK2Q9Y3S1 2297 aa15.2■□□□□ 0.02
TPM3-220ENST00000509601 ARHGAP32A7KAX9 2087 aa15.2■□□□□ 0.02
TPM3-220ENST00000509601 ANK2Q01484 3957 aa15.19■□□□□ 0.02
TPM3-220ENST00000509601 OR6C68A6NDL8 312 aa15.19■□□□□ 0.02
TPM3-220ENST00000509601 ATP6V1B2P21281 511 aa15.19■□□□□ 0.02
TPM3-220ENST00000509601 RBMXP38159 391 aaKnown RBP15.19■□□□□ 0.02
TPM3-220ENST00000509601 ERFP50548 548 aa15.19■□□□□ 0.02
TPM3-220ENST00000509601 TSPAN31Q12999 210 aa15.19■□□□□ 0.02
TPM3-220ENST00000509601 CYP2R1Q6VVX0 501 aa15.19■□□□□ 0.02
TPM3-220ENST00000509601 ZBTB46Q86UZ6 589 aa15.19■□□□□ 0.02
TPM3-220ENST00000509601 NPEPL1Q8NDH3 523 aa15.19■□□□□ 0.02
TPM3-220ENST00000509601 DIRC2Q96SL1 478 aa15.19■□□□□ 0.02
TPM3-220ENST00000509601 IFT27Q9BW83 186 aa15.19■□□□□ 0.02
TPM3-220ENST00000509601 ACTR3BQ9P1U1 418 aa15.19■□□□□ 0.02
TPM3-220ENST00000509601 TMCC3Q9ULS5 477 aa15.19■□□□□ 0.02
TPM3-220ENST00000509601 LYVE1Q9Y5Y7 322 aa15.19■□□□□ 0.02
TPM3-220ENST00000509601 TCRBV5S2A0A599 114 aa15.18■□□□□ 0.02
TPM3-220ENST00000509601 CLDN25C9JDP6 229 aa15.18■□□□□ 0.02
TPM3-220ENST00000509601 IDH3BO43837 385 aa15.18■□□□□ 0.02
TPM3-220ENST00000509601 TIMM8AO60220 97 aaPredicted RBP15.18■□□□□ 0.02
TPM3-220ENST00000509601 KRT36O76013 467 aa15.18■□□□□ 0.02
TPM3-220ENST00000509601 T-ENOLP0DO92 83 aa15.18■□□□□ 0.02
TPM3-220ENST00000509601 GSTM3P21266 225 aa15.18■□□□□ 0.02
TPM3-220ENST00000509601 SRP14P37108 136 aaKnown RBP15.18■□□□□ 0.02
TPM3-220ENST00000509601 IFNGR2P38484 337 aa15.18■□□□□ 0.02
TPM3-220ENST00000509601 CENPAP49450 140 aa15.18■□□□□ 0.02
TPM3-220ENST00000509601 MNAT1P51948 309 aa15.18■□□□□ 0.02
TPM3-220ENST00000509601 MXRA7P84157 204 aa15.18■□□□□ 0.02
TPM3-220ENST00000509601 MS4A2Q01362 244 aa15.18■□□□□ 0.02
TPM3-220ENST00000509601 ZNF770Q6IQ21 691 aaPredicted RBP15.18■□□□□ 0.02
TPM3-220ENST00000509601 ACSM5Q6NUN0 579 aa15.18■□□□□ 0.02
TPM3-220ENST00000509601 CORO6Q6QEF8 472 aa15.18■□□□□ 0.02
TPM3-220ENST00000509601 GJC3Q8NFK1 279 aa15.18■□□□□ 0.02
TPM3-220ENST00000509601 SLC26A10Q8NG04 563 aa15.18■□□□□ 0.02
TPM3-220ENST00000509601 OR4C15Q8NGM1 316 aa15.18■□□□□ 0.02
TPM3-220ENST00000509601 RAB1CQ92928 201 aa15.18■□□□□ 0.02
TPM3-220ENST00000509601 DCLRE1CQ96SD1 692 aaKnown RBP15.18■□□□□ 0.02
TPM3-220ENST00000509601 EGLN1Q9GZT9 426 aa15.18■□□□□ 0.02
TPM3-220ENST00000509601 DCAF16Q9NXF7 216 aa15.18■□□□□ 0.02
TPM3-220ENST00000509601 ATPIF1Q9UII2 106 aa15.18■□□□□ 0.02
TPM3-220ENST00000509601 DYSFO75923 2080 aa15.17■□□□□ 0.02
TPM3-220ENST00000509601 PLPP2O43688 288 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms