RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 DIRC2Q96SL1 478 aa11.17□□□□□ -0.62
DDX41-210ENST00000509576 CDADC1Q9BWV3 514 aa11.17□□□□□ -0.62
DDX41-210ENST00000509576 POLR2J2Q9GZM3 115 aaKnown RBP11.17□□□□□ -0.62
DDX41-210ENST00000509576 POLR2J3Q9H1A7 115 aaKnown RBP11.17□□□□□ -0.62
DDX41-210ENST00000509576 ELOVL3Q9HB03 270 aa11.17□□□□□ -0.62
DDX41-210ENST00000509576 IL19Q9UHD0 177 aa11.17□□□□□ -0.62
DDX41-210ENST00000509576 BAG5Q9UL15 447 aa11.17□□□□□ -0.62
DDX41-210ENST00000509576 PPP1R3CQ9UQK1 317 aa11.17□□□□□ -0.62
DDX41-210ENST00000509576 IGHV2-70DA0A0C4DH43 119 aa11.16□□□□□ -0.62
DDX41-210ENST00000509576 A0A1B0GWJ7 208 aa11.16□□□□□ -0.62
DDX41-210ENST00000509576 DCTN6O00399 190 aa11.16□□□□□ -0.62
DDX41-210ENST00000509576 KDELR2P33947 212 aa11.16□□□□□ -0.62
DDX41-210ENST00000509576 MDH2P40926 338 aaKnown RBP11.16□□□□□ -0.62
DDX41-210ENST00000509576 DEFB112Q30KQ8 113 aa11.16□□□□□ -0.62
DDX41-210ENST00000509576 LRRC23Q53EV4 343 aaPredicted RBP11.16□□□□□ -0.62
DDX41-210ENST00000509576 OR2T2Q6IF00 324 aa11.16□□□□□ -0.62
DDX41-210ENST00000509576 C1orf94Q6P1W5 598 aa11.16□□□□□ -0.62
DDX41-210ENST00000509576 BRD3OSQ6XYD6 125 aa11.16□□□□□ -0.62
DDX41-210ENST00000509576 ZNF841Q6ZN19 808 aa11.16□□□□□ -0.62
DDX41-210ENST00000509576 PTCHD4Q6ZW05 846 aa11.16□□□□□ -0.62
DDX41-210ENST00000509576 RHOUQ7L0Q8 258 aa11.16□□□□□ -0.62
DDX41-210ENST00000509576 SYT9Q86SS6 491 aa11.16□□□□□ -0.62
DDX41-210ENST00000509576 KLBQ86Z14 1044 aa11.16□□□□□ -0.62
DDX41-210ENST00000509576 ALDH16A1Q8IZ83 802 aa11.16□□□□□ -0.62
DDX41-210ENST00000509576 OFCC1Q8IZS5 231 aa11.16□□□□□ -0.62
DDX41-210ENST00000509576 KLHL36Q8N4N3 616 aa11.16□□□□□ -0.62
DDX41-210ENST00000509576 C19orf18Q8NEA5 215 aa11.16□□□□□ -0.62
DDX41-210ENST00000509576 OR8J3Q8NGG0 315 aa11.16□□□□□ -0.62
DDX41-210ENST00000509576 RASSF5Q8WWW0 418 aa11.16□□□□□ -0.62
DDX41-210ENST00000509576 MEGF10Q96KG7 1140 aa11.16□□□□□ -0.62
DDX41-210ENST00000509576 RBP7Q96R05 134 aa11.16□□□□□ -0.62
DDX41-210ENST00000509576 TMEM246Q9BRR3 403 aa11.16□□□□□ -0.62
DDX41-210ENST00000509576 PRDM13Q9H4Q3 707 aa11.16□□□□□ -0.62
DDX41-210ENST00000509576 STX18Q9P2W9 335 aaKnown RBP11.16□□□□□ -0.62
DDX41-210ENST00000509576 C12orf71A8MTZ7 269 aa11.15□□□□□ -0.62
DDX41-210ENST00000509576 FAM220BPB1ANY3 271 aa11.15□□□□□ -0.62
DDX41-210ENST00000509576 C22orf46C9J442 243 aa11.15□□□□□ -0.62
DDX41-210ENST00000509576 RER1O15258 196 aa11.15□□□□□ -0.62
DDX41-210ENST00000509576 HOXA3O43365 443 aaPredicted RBP11.15□□□□□ -0.62
DDX41-210ENST00000509576 SGCEO43556 437 aa11.15□□□□□ -0.62
DDX41-210ENST00000509576 SLC9A3P48764 834 aa11.15□□□□□ -0.62
DDX41-210ENST00000509576 PCBD1P61457 104 aa11.15□□□□□ -0.62
DDX41-210ENST00000509576 SF3A3Q12874 501 aaKnown RBP eCLIP11.15□□□□□ -0.622e-7■■■■■ 27.2
DDX41-210ENST00000509576 KLF10Q13118 480 aa11.15□□□□□ -0.62
DDX41-210ENST00000509576 MEP1BQ16820 701 aa11.15□□□□□ -0.62
DDX41-210ENST00000509576 RUSC1-AS1Q66K80 236 aa11.15□□□□□ -0.62
DDX41-210ENST00000509576 FITM2Q8N6M3 262 aa11.15□□□□□ -0.62
DDX41-210ENST00000509576 FAM156AQ8NDB6 213 aa11.15□□□□□ -0.62
DDX41-210ENST00000509576 NPEPL1Q8NDH3 523 aa11.15□□□□□ -0.62
DDX41-210ENST00000509576 OR52E2Q8NGJ4 325 aa11.15□□□□□ -0.62
DDX41-210ENST00000509576 WFDC12Q8WWY7 111 aa11.15□□□□□ -0.62
DDX41-210ENST00000509576 TMIGD2Q96BF3 282 aa11.15□□□□□ -0.62
DDX41-210ENST00000509576 TPD52L3Q96J77 140 aa11.15□□□□□ -0.62
DDX41-210ENST00000509576 MAGEB18Q96M61 343 aa11.15□□□□□ -0.62
DDX41-210ENST00000509576 SSBP3Q9BWW4 388 aaPredicted RBP11.15□□□□□ -0.62
DDX41-210ENST00000509576 WDR76Q9H967 626 aa11.15□□□□□ -0.62
DDX41-210ENST00000509576 CMTM6Q9NX76 183 aa11.15□□□□□ -0.62
DDX41-210ENST00000509576 PTTG3PQ9NZH4 202 aa11.15□□□□□ -0.62
DDX41-210ENST00000509576 ASH2LQ9UBL3 628 aa11.15□□□□□ -0.62
DDX41-210ENST00000509576 CTSZQ9UBR2 303 aa11.15□□□□□ -0.62
DDX41-210ENST00000509576 NDRG4Q9ULP0 352 aaKnown RBP11.15□□□□□ -0.62
DDX41-210ENST00000509576 A0A0G2JND7 137 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 TEX13CA0A0J9YWL9 993 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 PRSS37A4D1T9 235 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 C5orf63A6NC05 138 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 EFCAB9A8MZ26 197 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 F5H5P2 479 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 MRASO14807 208 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 HLA-DPB1P04440 258 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 PPIAL4GP0DN37 164 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 GSTM3P21266 225 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 ARHGDIAP52565 204 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 SELENOWP63302 87 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 HIST1H3AP68431 136 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 IL13RA1P78552 427 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 ST3GAL3Q11203 375 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 CYLC2Q14093 348 aaPredicted RBP11.14□□□□□ -0.63
DDX41-210ENST00000509576 KRTAP27-1Q3LI81 207 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 ZNF404Q494X3 552 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 MIDNQ504T8 468 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 ESCO2Q56NI9 601 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 ZMAT1Q5H9K5 638 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 HIST2H3PS2Q5TEC6 136 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 FBXW12Q6X9E4 464 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 RBMS3Q6XE24 437 aaKnown RBP11.14□□□□□ -0.63
DDX41-210ENST00000509576 HIST2H3AQ71DI3 136 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 OAFQ86UD1 273 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 MOGAT3Q86VF5 341 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 C1orf174Q8IYL3 243 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 KIR3DL3Q8N743 410 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 TSSK2Q96PF2 358 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 GPA33Q99795 319 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 ECSITQ9BQ95 431 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 SLC30A2Q9BRI3 323 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 MRI1Q9BV20 369 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 TMEM120AQ9BXJ8 343 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 MS4A7Q9GZW8 240 aaPredicted RBP11.14□□□□□ -0.63
DDX41-210ENST00000509576 SLITRK2Q9H156 845 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 SYT4Q9H2B2 425 aa11.14□□□□□ -0.63
DDX41-210ENST00000509576 ZMAT3Q9HA38 289 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms