RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 K7ERU9 68 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 M0R3G1 203 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 YY2O15391 372 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 FGF16O43320 207 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 SSNA1O43805 119 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 CDC40O60508 579 aaKnown RBP eCLIP3.99□□□□□ -1.77
NIPBL-206ENST00000509429 DUSP11O75319 330 aaKnown RBP3.99□□□□□ -1.77
NIPBL-206ENST00000509429 CA11O75493 328 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 HSBP1O75506 76 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 S1PR2O95136 353 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 GJB5O95377 273 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 SYNGR4O95473 234 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 NFATC1O95644 943 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 HPRP00739 348 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 GAPDHP04406 335 aaKnown RBP3.99□□□□□ -1.77
NIPBL-206ENST00000509429 CHRM4P08173 479 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 HIST1H1EP10412 219 aaKnown RBP3.99□□□□□ -1.77
NIPBL-206ENST00000509429 HOXB2P14652 356 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 TNFRSF1BP20333 461 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 OMGP23515 440 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 SPRP35270 261 aaPredicted RBP3.99□□□□□ -1.77
NIPBL-206ENST00000509429 SLC6A8P48029 635 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 PRLHRP49683 370 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 ATP1B3P54709 279 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 OR2B8PP59922 312 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 STXBP1P61764 594 aaKnown RBP3.99□□□□□ -1.77
NIPBL-206ENST00000509429 RAE1P78406 368 aaKnown RBP3.99□□□□□ -1.77
NIPBL-206ENST00000509429 C2orf80Q0P641 193 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 MAD2L1Q13257 205 aaPredicted RBP3.99□□□□□ -1.77
NIPBL-206ENST00000509429 RNPS1Q15287 305 aaKnown RBP3.99□□□□□ -1.77
NIPBL-206ENST00000509429 ZIC1Q15915 447 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 LINC01620Q4KN68 170 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 OTUD3Q5T2D3 398 aaPredicted RBP3.99□□□□□ -1.77
NIPBL-206ENST00000509429 OTUD1Q5VV17 481 aaPredicted RBP3.99□□□□□ -1.77
NIPBL-206ENST00000509429 PWWP2BQ6NUJ5 590 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 TAPT1Q6NXT6 567 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 CD200R1LQ6Q8B3 271 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 ZNF782Q6ZMW2 699 aaPredicted RBP3.99□□□□□ -1.77
NIPBL-206ENST00000509429 LINC01551Q86U37 167 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 ZC3HC1Q86WB0 502 aaKnown RBP3.99□□□□□ -1.77
NIPBL-206ENST00000509429 PACRGLQ8N7B6 248 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 ST6GALNAC3Q8NDV1 305 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 OR2Z1Q8NG97 314 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 OR4D9Q8NGE8 314 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 OR10Q1Q8NGQ4 319 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 OR1L6Q8NGR2 347 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 OR6N2Q8NGY6 317 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 OR1P1Q8NH06 330 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 OR52I2Q8NH67 350 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 ZNF420Q8TAQ5 688 aaPredicted RBP3.99□□□□□ -1.77
NIPBL-206ENST00000509429 ORAOV1Q8WV07 137 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 OVCA2Q8WZ82 227 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 ORAI1Q96D31 301 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 HPDLQ96IR7 371 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 ZNF354BQ96LW1 612 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 KLHL32Q96NJ5 620 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 MS4A10Q96PG2 267 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 OR2M2Q96R28 347 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 PNKPQ96T60 521 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 SLC6A7Q99884 636 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 CDCA4Q9BXL8 241 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 CADM1Q9BY67 442 aaKnown RBP3.99□□□□□ -1.77
NIPBL-206ENST00000509429 SLC39A8Q9C0K1 460 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 CHRNA10Q9GZZ6 450 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 ALG9Q9H6U8 611 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 RPF2Q9H7B2 306 aaKnown RBP3.99□□□□□ -1.77
NIPBL-206ENST00000509429 ZNF696Q9H7X3 374 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 CACYBPQ9HB71 228 aaKnown RBP3.99□□□□□ -1.77
NIPBL-206ENST00000509429 LHX9Q9NQ69 397 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 MRPL17Q9NRX2 175 aaKnown RBP3.99□□□□□ -1.77
NIPBL-206ENST00000509429 MED11Q9P086 117 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 RCC2Q9P258 522 aaKnown RBP3.99□□□□□ -1.77
NIPBL-206ENST00000509429 DNMT3BQ9UBC3 853 aaKnown RBP3.99□□□□□ -1.77
NIPBL-206ENST00000509429 P2RX2Q9UBL9 471 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 VPS29Q9UBQ0 182 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 CD84Q9UIB8 345 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 ZNF346Q9UL40 294 aaKnown RBP3.99□□□□□ -1.77
NIPBL-206ENST00000509429 SH2B3Q9UQQ2 575 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 PLCH1Q4KWH8 1693 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 RREB1Q92766 1687 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 ANKRD36CQ5JPF3 1778 aa3.99□□□□□ -1.77
NIPBL-206ENST00000509429 NAV1Q8NEY1 1877 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 NWD2Q9ULI1 1742 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 TBC1D3DA0A087WVF3 549 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 TGIF2-C20orf24A0A0A6YYL0 155 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 PPIAL4CA0A0B4J2A2 164 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 A0A1B0GUS0 222 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 CDHR4A6H8M9 788 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 ANTXRLA6NF34 631 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 EFCAB9A8MZ26 197 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 TBC1D3LB9A6J9 549 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 F6UZH7 168 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 SLC17A3O00476 420 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 GYG2O15488 501 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 VENTXO95231 258 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 MPZL1O95297 269 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 SLC25A27O95847 323 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 C6orf47O95873 294 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 TIMP1P01033 207 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 IFNW1P05000 195 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms