RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 OR8B4Q96RC9 309 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 SLC25A21Q9BQT8 299 aaPredicted RBP9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 PTDSS2Q9BVG9 487 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 MYOZ1Q9NP98 299 aaPredicted RBP9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 SLC39A1Q9NY26 324 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 CKLFQ9UBR5 152 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 C19orf25Q9UFG5 118 aaPredicted RBP9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 OPN4Q9UHM6 478 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 PFDN2Q9UHV9 154 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 GPN3Q9UHW5 284 aaPredicted RBP9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 ING1Q9UK53 422 aaPredicted RBP9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 KLHDC2Q9Y2U9 406 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 PTRH2Q9Y3E5 179 aaKnown RBP9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 B3GALT1Q9Y5Z6 326 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 COL27A1Q8IZC6 1860 aaPredicted RBP9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 TRAV36DV7A0A075B6V5 113 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 TMED7-TICAM2A0A0A6YYA0 188 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 F5H5P2 479 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 SLC25A12O75746 678 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 ZNF250P15622 560 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 ENPP1P22413 925 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 POLR2HP52434 150 aaKnown RBP9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 SLC17A1Q14916 467 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 PCOLCEQ15113 449 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 SLC18B1Q6NT16 456 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 ARSKQ6UWY0 536 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 MAMDC2Q7Z304 686 aaPredicted RBP9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 SLC51BQ86UW2 128 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 ZNF679Q8IYX0 411 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 ZNF454Q8N9F8 522 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 OR2AK2Q8NG84 335 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 OR5L2Q8NGL0 311 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 OR4C16Q8NGL9 310 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 OR8K3Q8NH51 312 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 GCDHQ92947 438 aaPredicted RBP9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 CA10Q9NS85 328 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 KLRF1Q9NZS2 232 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 VDAC3Q9Y277 283 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 TMED7Q9Y3B3 224 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 C11orf98E9PRG8 122 aa9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 DCTN6O00399 190 aa9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 NPIPB7O75200 414 aa9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 ZFAND5O76080 213 aa9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 PMS2P2O95744 297 aa9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 BGLAPP02818 100 aa9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 CD2P06729 351 aa9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 CD37P11049 281 aa9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 AGTR1P30556 359 aa9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 MAGEB1P43366 347 aa9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 TAS2R19P59542 299 aa9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 ROM1Q03395 351 aa9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 SPEM2Q0P670 501 aa9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 HLXQ14774 488 aaPredicted RBP9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 INPP5JQ15735 1006 aaPredicted RBP9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 SMUG1Q53HV7 270 aa9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 TEX30Q5JUR7 227 aa9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 RGS7BPQ6MZT1 257 aaPredicted RBP9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 C5orf46Q6UWT4 87 aa9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 TMUB2Q71RG4 321 aa9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 DPY19L4Q7Z388 723 aa9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 GRINAQ7Z429 371 aa9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 TMEM229BQ8NBD8 167 aa9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 RNF128Q8TEB7 428 aa9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 TSEN15Q8WW01 171 aaKnown RBP9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 FAM3DQ96BQ1 224 aa9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 ZNF587Q96SQ5 575 aaPredicted RBP9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 POTEKPQ9BYX7 375 aa9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 CYB5R1Q9UHQ9 305 aa9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 NXT1Q9UKK6 140 aaKnown RBP9.86□□□□□ -0.83
SH3RF1-203ENST00000508685 CFAP47Q6ZTR5 3102 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 TRAV8-7A0A075B6U6 113 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 IGHV1-45A0A0A0MS14 117 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 CIB4A0PJX0 185 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 MFSD2BA6NFX1 497 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 TVP23AA6NH52 213 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 SHISA8B8ZZ34 492 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 MASP2O00187 686 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 AKR7A3O95154 331 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 PLGP00747 810 aaPredicted RBP9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 RLN1P04808 185 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 ACSM4P0C7M7 580 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 ZNF883P0CG24 379 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 GTF2F2P13984 249 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 POU3F4P49335 361 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 RPS15P62841 145 aaKnown RBP9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 FGL1Q08830 312 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 C17orf67Q0P5P2 114 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 C2orf76Q3KRA6 126 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 PLA2G2CQ5R387 149 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 CLVS2Q5SYC1 327 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 TMEM65Q6PI78 240 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 MISPQ8IVT2 679 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 PRSS35Q8N3Z0 413 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 ELP5Q8TE02 316 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 PTX4Q96A99 478 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 CCDC120Q96HB5 630 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 RASL10BQ96S79 203 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 CMKLR1Q99788 373 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 DEFB126Q9BYW3 111 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 C1orf198Q9H425 327 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms