RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 KLHL17Q6TDP4 642 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 KLHL24Q6TFL4 600 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 B3GLCTQ6Y288 498 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 SLC35D2Q76EJ3 337 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 SLC46A3Q7Z3Q1 461 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 TSEN54Q7Z6J9 526 aaKnown RBP3.92□□□□□ -1.78
NUP54-206ENST00000508465 PXKQ7Z7A4 578 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 PIGWQ7Z7B1 504 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 MYPOPQ86VE0 399 aaPredicted RBP3.92□□□□□ -1.78
NUP54-206ENST00000508465 IGFN1Q86VF2 1251 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 C20orf196Q8IYI0 205 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 TMEM123Q8N131 208 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 FAM86B1Q8N7N1 296 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 OR1K1Q8NGR3 316 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 OR6N1Q8NGY5 312 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 OR5J2Q8NH18 312 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 FGFBP3Q8TAT2 258 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 TMEM171Q8WVE6 324 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 TMEM239Q8WW34 195 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 IGFBPL1Q8WX77 278 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 PIGTQ969N2 578 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 CMTM5Q96DZ9 223 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 SNX22Q96L94 193 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 HS6ST2Q96MM7 605 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 ALKBH3Q96Q83 286 aaPredicted RBP3.92□□□□□ -1.78
NUP54-206ENST00000508465 TNFRSF13CQ96RJ3 184 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 CCT8L2Q96SF2 557 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 CDRT15Q96T59 188 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 EPYCQ99645 322 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 SH3GL3Q99963 347 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 KCTD14Q9BQ13 255 aaPredicted RBP3.92□□□□□ -1.78
NUP54-206ENST00000508465 FNDC11Q9BVV2 318 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 PCDHAC1Q9H158 963 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 NANSQ9NR45 359 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 ZNF701Q9NV72 531 aaPredicted RBP3.92□□□□□ -1.78
NUP54-206ENST00000508465 BAG5Q9UL15 447 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 A4GNTQ9UNA3 340 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 POFUT2Q9Y2G5 429 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 ARL2BPQ9Y2Y0 163 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 MAGED1Q9Y5V3 778 aaPredicted RBP3.92□□□□□ -1.78
NUP54-206ENST00000508465 V9GYQ6 96 aa3.92□□□□□ -1.78
NUP54-206ENST00000508465 ZFHX3Q15911 3703 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 HEATR1Q9H583 2144 aaKnown RBP3.91□□□□□ -1.78
NUP54-206ENST00000508465 ARID1AO14497 2285 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 IGLV5-39A0A0G2JS06 123 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 SH3PXD2BA1X283 911 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 RPL36A-HNRNPH2H7BZ11 118 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 hCG_2039718K7EN88 272 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 DYNC1I1O14576 645 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 SSX4O60224 188 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 LY6HO94772 140 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 OR5F1O95221 314 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 LY6G6DO95868 133 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 MT-ATP6P00846 226 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 IGHV4-39P01824 125 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 MT-ND1P03886 318 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 ANXA2P07355 339 aaKnown RBP3.91□□□□□ -1.78
NUP54-206ENST00000508465 QDPRP09417 244 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 ASAH2BP0C7U1 165 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 CECR9P0C854 216 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 DANCRP0C864 163 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 IFI30P13284 250 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 PTAFRP25105 342 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 CALCRP30988 508 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 CDAP32320 146 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 CSNK1A1P48729 337 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 IDH3GP51553 393 aaPredicted RBP3.91□□□□□ -1.78
NUP54-206ENST00000508465 RPS4XP62701 263 aaKnown RBP3.91□□□□□ -1.78
NUP54-206ENST00000508465 RPL18Q07020 188 aaKnown RBP3.91□□□□□ -1.78
NUP54-206ENST00000508465 ZP4Q12836 540 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 NPRL3Q12980 569 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 FHL3Q13643 280 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 MFSD13AQ14CX5 517 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 GLYATQ6IB77 296 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 PODNL1Q6PEZ8 512 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 C5orf46Q6UWT4 87 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 HACD2Q6Y1H2 254 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 DCDC5Q6ZRR9 648 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 RINLQ6ZS11 566 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 C1orf122Q6ZSJ8 110 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 PTCHD4Q6ZW05 846 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 NANOGNBQ7Z5D8 188 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 ABHD12BQ7Z5M8 362 aaPredicted RBP3.91□□□□□ -1.78
NUP54-206ENST00000508465 MDP1Q86V88 176 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 SKA3Q8IX90 412 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 FBXL14Q8N1E6 418 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 ZCCHC24Q8N2G6 241 aaKnown RBP3.91□□□□□ -1.78
NUP54-206ENST00000508465 CLDN22Q8N7P3 220 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 SCAIQ8N9R8 606 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 OR6S1Q8NH40 331 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 OR52J3Q8NH60 311 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 OR51A7Q8NH64 312 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 RASSF5Q8WWW0 418 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 LZICQ8WZA0 190 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 HDAC2Q92769 488 aaKnown RBP3.91□□□□□ -1.78
NUP54-206ENST00000508465 TMEM54Q969K7 222 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 FAM162AQ96A26 154 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 BPIFA2Q96DR5 249 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 FBXO17Q96EF6 278 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 SGTBQ96EQ0 304 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms