RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 CSF1P09603 554 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 PPIAL4FP0DN26 164 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 PPIAL4GP0DN37 164 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 PGAM2P15259 253 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 EPCAMP16422 314 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 AGTR2P50052 363 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 WDR5P61964 334 aaKnown RBP9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 IL13RA1P78552 427 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 PAX2Q02962 417 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 XKR6Q5GH73 641 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 PRSS54Q6PEW0 395 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 LGI4Q8N135 537 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 MUC20Q8N307 709 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 OR11H1Q8NG94 326 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 OR13C4Q8NGS5 318 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 OR11H2Q8NH07 326 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 BRIX1Q8TDN6 353 aaKnown RBP9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 SECTM1Q8WVN6 248 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 TNFAIP8L1Q8WVP5 186 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 ADIPOR1Q96A54 375 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 UCN2Q96RP3 112 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 IL4I1Q96RQ9 567 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 IMMP2LQ96T52 175 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 CCDC3Q9BQI4 270 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 PLK3Q9H4B4 646 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 CENPMQ9NSP4 180 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 HIF1ANQ9NWT6 349 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 ZNF230Q9UIE0 474 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 MEMO1Q9Y316 297 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 PTGDR2Q9Y5Y4 395 aa9.77□□□□□ -0.85
PDLIM5-210ENST00000508216 SMIM30A4D0T7 59 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 UMAD1C9J7I0 102 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 ECI2O75521 394 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 SCGB1D1O95968 90 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 IMPA1P29218 277 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 AVPR1AP37288 418 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 VIPR2P41587 438 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 PPOXP50336 477 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 ST8SIA6P61647 398 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 PGBD2Q6P3X8 592 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 PODNL1Q6PEZ8 512 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 TMEM220Q6QAJ8 160 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 DEFB128Q7Z7B8 93 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 SCD5Q86SK9 330 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 ETFBKMTQ8IXQ9 262 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 CMTM1Q8IZ96 169 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 HASPINQ8TF76 798 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 FGF11Q92914 225 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 RAB1CQ92928 201 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 LENG9Q96B70 501 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 SLC35B3Q9H1N7 401 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 SLCO5A1Q9H2Y9 848 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 ELL3Q9HB65 397 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 SEMA4GQ9NTN9 838 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 FKBP11Q9NYL4 201 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 FZD1Q9UP38 647 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 RASD1Q9Y272 281 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 HS3ST3B1Q9Y662 390 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 COL2A1P02458 1487 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 RLFQ13129 1914 aa9.76□□□□□ -0.85
PDLIM5-210ENST00000508216 TRAV26-1A0A087WT03 109 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 KCNE1BA0A087WTH5 132 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 SUPT3HB4E1H0 165 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 TISP43B9A030 160 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 B9A039 149 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 G3V4G9 280 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 CXCL1P09341 107 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 TNFSF4P23510 183 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 MMP11P24347 488 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 SOX18P35713 384 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 UBE2KP61086 200 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 ST3GAL3Q11203 375 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 ZNF234Q14588 700 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 TMEM183BQ1AE95 376 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 MTSS1LQ765P7 747 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 COX18Q8N8Q8 333 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 ZFP41Q8N8Y5 198 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 SIDT2Q8NBJ9 832 aaKnown RBP9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 PLPP7Q8NBV4 271 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 ZNF784Q8NCA9 323 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 SH3RF2Q8TEC5 729 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 TSLPQ969D9 159 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 FNDC11Q9BVV2 318 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 SGPP1Q9BX95 441 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 ZFAND3Q9H8U3 227 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 POPDC3Q9HBV1 291 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 NOX4Q9NPH5 578 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 MRPL22Q9NWU5 206 aaKnown RBP9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 CDC42EP3Q9UKI2 254 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 SLC45A2Q9UMX9 530 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 FARSAQ9Y285 508 aaKnown RBP9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 A0A0B4J2A0 478 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 TRBC2A0A5B9 178 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 OR5B21A6NL26 309 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 PYCARD-AS1I3L0S3 204 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 K7EPK0 472 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 LAMTOR5O43504 91 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 C4BPAP04003 597 aaKnown RBP9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 IL3P08700 152 aa9.75□□□□□ -0.85
PDLIM5-210ENST00000508216 ACP2P11117 423 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms