RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 SF3B4Q15427 424 aaKnown RBP eCLIP12.2□□□□□ -0.46
SERF1B-204ENST00000506542 MEP1BQ16820 701 aa12.2□□□□□ -0.46
SERF1B-204ENST00000506542 SLC25A35Q3KQZ1 300 aa12.2□□□□□ -0.46
SERF1B-204ENST00000506542 LRFN4Q6PJG9 635 aa12.2□□□□□ -0.46
SERF1B-204ENST00000506542 KCTD20Q7Z5Y7 419 aa12.2□□□□□ -0.46
SERF1B-204ENST00000506542 ZNF454Q8N9F8 522 aa12.2□□□□□ -0.46
SERF1B-204ENST00000506542 OR6N1Q8NGY5 312 aa12.2□□□□□ -0.46
SERF1B-204ENST00000506542 RNF128Q8TEB7 428 aa12.2□□□□□ -0.46
SERF1B-204ENST00000506542 ZNF775Q96BV0 537 aaPredicted RBP12.2□□□□□ -0.46
SERF1B-204ENST00000506542 STARD4Q96DR4 205 aa12.2□□□□□ -0.46
SERF1B-204ENST00000506542 PRRG4Q9BZD6 226 aa12.2□□□□□ -0.46
SERF1B-204ENST00000506542 ACOXLQ9NUZ1 547 aa12.2□□□□□ -0.46
SERF1B-204ENST00000506542 FOXD3Q9UJU5 478 aaPredicted RBP12.2□□□□□ -0.46
SERF1B-204ENST00000506542 ING1Q9UK53 422 aaPredicted RBP12.2□□□□□ -0.46
SERF1B-204ENST00000506542 MCTS1Q9ULC4 181 aaKnown RBP12.2□□□□□ -0.46
SERF1B-204ENST00000506542 AKAP6Q13023 2319 aa12.2□□□□□ -0.46
SERF1B-204ENST00000506542 AKAP9Q99996 3911 aa12.2□□□□□ -0.46
SERF1B-204ENST00000506542 IGKV3D-15A0A087WSY6 115 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 PLPP2O43688 288 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 SULT1C4O75897 302 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 ABHD16AO95870 558 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 CD53P19397 219 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 SH3BGRP55822 239 aaPredicted RBP12.19□□□□□ -0.46
SERF1B-204ENST00000506542 CCDC58Q4VC31 144 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 C10orf128Q5T292 105 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 OTPQ5XKR4 325 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 SLC18B1Q6NT16 456 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 CD200R1LQ6Q8B3 271 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.19□□□□□ -0.46
SERF1B-204ENST00000506542 FAM220AQ7Z4H9 259 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.19□□□□□ -0.46
SERF1B-204ENST00000506542 C20orf196Q8IYI0 205 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 ACBD4Q8NC06 268 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 ASB17Q8WXJ9 295 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 TMEM203Q969S6 136 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 TRMT61AQ96FX7 289 aaKnown RBP12.19□□□□□ -0.46
SERF1B-204ENST00000506542 EXOSC4Q9NPD3 245 aaKnown RBP12.19□□□□□ -0.46
SERF1B-204ENST00000506542 MRM2Q9UI43 246 aaKnown RBP12.19□□□□□ -0.46
SERF1B-204ENST00000506542 ST6GALNAC2Q9UJ37 374 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 SSR3Q9UNL2 185 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 A0A1W2PPL8 197 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 METTL15A6NJ78 407 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 PSMD9O00233 223 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 OGG1O15527 345 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 KRT8P05787 483 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 TACSTD2P09758 323 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 OR8G3PP0DMU2 310 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 NTF4P34130 210 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 OPRM1P35372 400 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 UGT2B10P36537 528 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 ASCL1P50553 236 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 GUSBP1Q15486 140 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 PHYHD1Q5SRE7 291 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 DMKNQ6E0U4 476 aaPredicted RBP12.19□□□□□ -0.46
SERF1B-204ENST00000506542 RPL22L1Q6P5R6 122 aaKnown RBP12.19□□□□□ -0.46
SERF1B-204ENST00000506542 USP43Q70EL4 1123 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 AAED1Q7RTV5 226 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 DMRTC2Q8IXT2 367 aaPredicted RBP12.19□□□□□ -0.46
SERF1B-204ENST00000506542 KBTBD8Q8NFY9 601 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 LINC01560Q8TB33 94 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 DYNC2LI1Q8TCX1 351 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 HAVCR2Q8TDQ0 301 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 THEM6Q8WUY1 208 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 C11orf40Q8WZ69 217 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 TMEM45BQ96B21 275 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 AMELYQ99218 206 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 SFXN3Q9BWM7 321 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 DCSTAMPQ9H295 470 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 RNF167Q9H6Y7 350 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 C12orf49Q9H741 205 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 GALNT8Q9NY28 637 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 JKAMPQ9P055 326 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 GRIP1Q9Y3R0 1128 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 ZNF175Q9Y473 711 aa12.19□□□□□ -0.46
SERF1B-204ENST00000506542 SPG11Q96JI7 2443 aa12.18□□□□□ -0.46
SERF1B-204ENST00000506542 CELSR1Q9NYQ6 3014 aa12.18□□□□□ -0.46
SERF1B-204ENST00000506542 TRDV1A0A1B0GX56 115 aa12.18□□□□□ -0.46
SERF1B-204ENST00000506542 GPR171O14626 319 aa12.18□□□□□ -0.46
SERF1B-204ENST00000506542 GALP22466 123 aa12.18□□□□□ -0.46
SERF1B-204ENST00000506542 VAMP1P23763 118 aa12.18□□□□□ -0.46
SERF1B-204ENST00000506542 EDNRAP25101 427 aa12.18□□□□□ -0.46
SERF1B-204ENST00000506542 FGF9P31371 208 aaPredicted RBP12.18□□□□□ -0.46
SERF1B-204ENST00000506542 TGM4P49221 684 aa12.18□□□□□ -0.46
SERF1B-204ENST00000506542 TUBA1BP68363 451 aa12.18□□□□□ -0.46
SERF1B-204ENST00000506542 FABP5Q01469 135 aa12.18□□□□□ -0.46
SERF1B-204ENST00000506542 ROM1Q03395 351 aa12.18□□□□□ -0.46
SERF1B-204ENST00000506542 MRPL28Q13084 256 aaKnown RBP12.18□□□□□ -0.46
SERF1B-204ENST00000506542 LSAMPQ13449 338 aa12.18□□□□□ -0.46
SERF1B-204ENST00000506542 EIF2B1Q14232 305 aaKnown RBP12.18□□□□□ -0.46
SERF1B-204ENST00000506542 CDK5R1Q15078 307 aa12.18□□□□□ -0.46
SERF1B-204ENST00000506542 KCNMB1Q16558 191 aa12.18□□□□□ -0.46
SERF1B-204ENST00000506542 ZNF474Q6S9Z5 364 aaPredicted RBP12.18□□□□□ -0.46
SERF1B-204ENST00000506542 ARL9Q6T311 187 aa12.18□□□□□ -0.46
SERF1B-204ENST00000506542 FOXL2NBQ6ZUU3 175 aa12.18□□□□□ -0.46
SERF1B-204ENST00000506542 TUBA1AQ71U36 451 aa12.18□□□□□ -0.46
SERF1B-204ENST00000506542 ZNF610Q8N9Z0 462 aa12.18□□□□□ -0.46
SERF1B-204ENST00000506542 OR10H5Q8NGA6 315 aa12.18□□□□□ -0.46
SERF1B-204ENST00000506542 RNF166Q96A37 237 aaPredicted RBP12.18□□□□□ -0.46
SERF1B-204ENST00000506542 PGLYRP3Q96LB9 341 aa12.18□□□□□ -0.46
SERF1B-204ENST00000506542 OR8B4Q96RC9 309 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms