RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 MT-ND5P03915 603 aa14.34□□□□□ -0.11
SNCA-209ENST00000506244 SPI1P17947 270 aa14.34□□□□□ -0.11
SNCA-209ENST00000506244 FMO3P31513 532 aa14.34□□□□□ -0.11
SNCA-209ENST00000506244 PYCR1P32322 319 aa14.34□□□□□ -0.11
SNCA-209ENST00000506244 WNT5AP41221 380 aa14.34□□□□□ -0.11
SNCA-209ENST00000506244 RGS6P49758 472 aa14.34□□□□□ -0.11
SNCA-209ENST00000506244 ECH1Q13011 328 aa14.34□□□□□ -0.11
SNCA-209ENST00000506244 GINS1Q14691 196 aa14.34□□□□□ -0.11
SNCA-209ENST00000506244 NKPD1Q17RQ9 610 aa14.34□□□□□ -0.11
SNCA-209ENST00000506244 ZNF718Q3SXZ3 478 aa14.34□□□□□ -0.11
SNCA-209ENST00000506244 ELFN2Q5R3F8 820 aa14.34□□□□□ -0.11
SNCA-209ENST00000506244 ZNF362Q5T0B9 420 aaPredicted RBP14.34□□□□□ -0.11
SNCA-209ENST00000506244 ZNF101Q8IZC7 436 aa14.34□□□□□ -0.11
SNCA-209ENST00000506244 NEU4Q8WWR8 484 aaPredicted RBP14.34□□□□□ -0.11
SNCA-209ENST00000506244 CENPNQ96H22 339 aaPredicted RBP14.34□□□□□ -0.11
SNCA-209ENST00000506244 COX4I2Q96KJ9 171 aa14.34□□□□□ -0.11
SNCA-209ENST00000506244 DDOQ99489 341 aa14.34□□□□□ -0.11
SNCA-209ENST00000506244 RHNO1Q9BSD3 238 aa14.34□□□□□ -0.11
SNCA-209ENST00000506244 NMNAT2Q9BZQ4 307 aa14.34□□□□□ -0.11
SNCA-209ENST00000506244 SLC25A19Q9HC21 320 aa14.34□□□□□ -0.11
SNCA-209ENST00000506244 KRT84Q9NSB2 600 aa14.34□□□□□ -0.11
SNCA-209ENST00000506244 CYB5R1Q9UHQ9 305 aa14.34□□□□□ -0.11
SNCA-209ENST00000506244 MED13LQ71F56 2210 aa14.34□□□□□ -0.11
SNCA-209ENST00000506244 IGLV3-9A0A075B6K5 115 aa14.33□□□□□ -0.12
SNCA-209ENST00000506244 TMEM129A0AVI4 362 aa14.33□□□□□ -0.12
SNCA-209ENST00000506244 TRIM64A6NGJ6 449 aa14.33□□□□□ -0.12
SNCA-209ENST00000506244 TRIM64BA6NI03 449 aa14.33□□□□□ -0.12
SNCA-209ENST00000506244 H7C1Q1 480 aa14.33□□□□□ -0.12
SNCA-209ENST00000506244 RER1O15258 196 aa14.33□□□□□ -0.12
SNCA-209ENST00000506244 ADRA2AP08913 450 aa14.33□□□□□ -0.12
SNCA-209ENST00000506244 INHBBP09529 407 aa14.33□□□□□ -0.12
SNCA-209ENST00000506244 PPP1CBP62140 327 aa14.33□□□□□ -0.12
SNCA-209ENST00000506244 ESRRGP62508 458 aa14.33□□□□□ -0.12
SNCA-209ENST00000506244 HIST1H3AP68431 136 aa14.33□□□□□ -0.12
SNCA-209ENST00000506244 KPNB1Q14974 876 aaKnown RBP14.33□□□□□ -0.12
SNCA-209ENST00000506244 HIST2H3PS2Q5TEC6 136 aa14.33□□□□□ -0.12
SNCA-209ENST00000506244 SLC18B1Q6NT16 456 aa14.33□□□□□ -0.12
SNCA-209ENST00000506244 DNM1P46Q6ZS02 220 aa14.33□□□□□ -0.12
SNCA-209ENST00000506244 RFPL4BQ6ZWI9 263 aa14.33□□□□□ -0.12
SNCA-209ENST00000506244 HIST2H3AQ71DI3 136 aa14.33□□□□□ -0.12
SNCA-209ENST00000506244 OR6K6Q8NGW6 343 aa14.33□□□□□ -0.12
SNCA-209ENST00000506244 LRTOMTQ8WZ04 291 aa14.33□□□□□ -0.12
SNCA-209ENST00000506244 FAM168AQ92567 244 aa14.33□□□□□ -0.12
SNCA-209ENST00000506244 OSBPL10Q9BXB5 764 aa14.33□□□□□ -0.12
SNCA-209ENST00000506244 TBCCD1Q9NVR7 557 aa14.33□□□□□ -0.12
SNCA-209ENST00000506244 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.33□□□□□ -0.12
SNCA-209ENST00000506244 CGGBP1Q9UFW8 167 aaPredicted RBP14.33□□□□□ -0.12
SNCA-209ENST00000506244 FZR1Q9UM11 496 aa14.33□□□□□ -0.12
SNCA-209ENST00000506244 COMMD3-BMI1R4GMX3 469 aa14.33□□□□□ -0.12
SNCA-209ENST00000506244 ZNF469Q96JG9 3925 aaPredicted RBP14.32□□□□□ -0.12
SNCA-209ENST00000506244 PRR23D1E9PI22 279 aaPredicted RBP14.32□□□□□ -0.12
SNCA-209ENST00000506244 PRR23D2P0DMB1 279 aaPredicted RBP14.32□□□□□ -0.12
SNCA-209ENST00000506244 GGT2P36268 569 aa14.32□□□□□ -0.12
SNCA-209ENST00000506244 ENTPD1P49961 510 aa14.32□□□□□ -0.12
SNCA-209ENST00000506244 PDLIM4P50479 330 aa14.32□□□□□ -0.12
SNCA-209ENST00000506244 ERVS71-1P61550 626 aa14.32□□□□□ -0.12
SNCA-209ENST00000506244 CDK5Q00535 292 aa14.32□□□□□ -0.12
SNCA-209ENST00000506244 MSMPQ1L6U9 139 aa14.32□□□□□ -0.12
SNCA-209ENST00000506244 CCDC92Q53HC0 331 aaPredicted RBP14.32□□□□□ -0.12
SNCA-209ENST00000506244 MBNL2Q5VZF2 373 aaKnown RBP14.32□□□□□ -0.12
SNCA-209ENST00000506244 OTPQ5XKR4 325 aa14.32□□□□□ -0.12
SNCA-209ENST00000506244 CORO6Q6QEF8 472 aa14.32□□□□□ -0.12
SNCA-209ENST00000506244 AMIGO2Q86SJ2 522 aa14.32□□□□□ -0.12
SNCA-209ENST00000506244 BIVMQ86UB2 503 aa14.32□□□□□ -0.12
SNCA-209ENST00000506244 LINC00346Q8IVM7 164 aa14.32□□□□□ -0.12
SNCA-209ENST00000506244 ZNF525Q8N782 197 aa14.32□□□□□ -0.12
SNCA-209ENST00000506244 PYDC1Q8WXC3 89 aa14.32□□□□□ -0.12
SNCA-209ENST00000506244 OTULINQ96BN8 352 aa14.32□□□□□ -0.12
SNCA-209ENST00000506244 PITX2Q99697 317 aa14.32□□□□□ -0.12
SNCA-209ENST00000506244 ATF6BQ99941 703 aa14.32□□□□□ -0.12
SNCA-209ENST00000506244 MRPL22Q9NWU5 206 aaKnown RBP14.32□□□□□ -0.12
SNCA-209ENST00000506244 TAAR3PQ9P1P4 343 aa14.32□□□□□ -0.12
SNCA-209ENST00000506244 GRIP1Q9Y3R0 1128 aa14.32□□□□□ -0.12
SNCA-209ENST00000506244 NDUFS8O00217 210 aa14.31□□□□□ -0.12
SNCA-209ENST00000506244 SURF4O15260 269 aa14.31□□□□□ -0.12
SNCA-209ENST00000506244 PRODHO43272 600 aa14.31□□□□□ -0.12
SNCA-209ENST00000506244 IGHV3-13P01766 116 aa14.31□□□□□ -0.12
SNCA-209ENST00000506244 GYPBP06028 91 aa14.31□□□□□ -0.12
SNCA-209ENST00000506244 SLC25A16P16260 332 aa14.31□□□□□ -0.12
SNCA-209ENST00000506244 IGFBP5P24593 272 aa14.31□□□□□ -0.12
SNCA-209ENST00000506244 ALDH3B1P43353 468 aa14.31□□□□□ -0.12
SNCA-209ENST00000506244 DAPP51397 102 aa14.31□□□□□ -0.12
SNCA-209ENST00000506244 CRISP1P54107 249 aa14.31□□□□□ -0.12
SNCA-209ENST00000506244 TNK1Q13470 666 aa14.31□□□□□ -0.12
SNCA-209ENST00000506244 ZMAT1Q5H9K5 638 aa14.31□□□□□ -0.12
SNCA-209ENST00000506244 LRP11Q86VZ4 500 aa14.31□□□□□ -0.12
SNCA-209ENST00000506244 OR51L1Q8NGJ5 315 aa14.31□□□□□ -0.12
SNCA-209ENST00000506244 OR5L1Q8NGL2 311 aa14.31□□□□□ -0.12
SNCA-209ENST00000506244 SLC25A40Q8TBP6 338 aa14.31□□□□□ -0.12
SNCA-209ENST00000506244 MARS2Q96GW9 593 aaKnown RBP14.31□□□□□ -0.12
SNCA-209ENST00000506244 PIMREGQ9BSJ6 248 aa14.31□□□□□ -0.12
SNCA-209ENST00000506244 CYSLTR2Q9NS75 346 aa14.31□□□□□ -0.12
SNCA-209ENST00000506244 MYEF2Q9P2K5 600 aaKnown RBP14.31□□□□□ -0.12
SNCA-209ENST00000506244 OAZ3Q9UMX2 235 aa14.31□□□□□ -0.12
SNCA-209ENST00000506244 MAP1AP78559 2803 aaPredicted RBP14.31□□□□□ -0.12
SNCA-209ENST00000506244 PLSCR5A0PG75 271 aa14.3□□□□□ -0.12
SNCA-209ENST00000506244 TVP23AA6NH52 213 aa14.3□□□□□ -0.12
SNCA-209ENST00000506244 GLCEO94923 617 aa14.3□□□□□ -0.12
SNCA-209ENST00000506244 SPARCP09486 303 aa14.3□□□□□ -0.12
SNCA-209ENST00000506244 LIPAP38571 399 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms