RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 HAVCR1Q96D42 359 aa16.89■□□□□ 0.29
UBE2D3-220ENST00000505307 FAM46AQ96IP4 442 aaKnown RBP16.89■□□□□ 0.29
UBE2D3-220ENST00000505307 DCLRE1CQ96SD1 692 aaKnown RBP16.89■□□□□ 0.29
UBE2D3-220ENST00000505307 RBM4Q9BWF3 364 aaKnown RBP16.89■□□□□ 0.29
UBE2D3-220ENST00000505307 MED4Q9NPJ6 270 aa16.89■□□□□ 0.29
UBE2D3-220ENST00000505307 VSX1Q9NZR4 365 aaPredicted RBP16.89■□□□□ 0.29
UBE2D3-220ENST00000505307 SLC16A7O60669 478 aa16.88■□□□□ 0.29
UBE2D3-220ENST00000505307 GMNNO75496 209 aa16.88■□□□□ 0.29
UBE2D3-220ENST00000505307 LIMS1P48059 325 aa16.88■□□□□ 0.29
UBE2D3-220ENST00000505307 RGS6P49758 472 aa16.88■□□□□ 0.29
UBE2D3-220ENST00000505307 PGM2L1Q6PCE3 622 aa16.88■□□□□ 0.29
UBE2D3-220ENST00000505307 DPY19L2P2Q6ZN68 376 aa16.88■□□□□ 0.29
UBE2D3-220ENST00000505307 TSEN54Q7Z6J9 526 aaKnown RBP16.88■□□□□ 0.29
UBE2D3-220ENST00000505307 OR5L1Q8NGL2 311 aa16.88■□□□□ 0.29
UBE2D3-220ENST00000505307 CMBLQ96DG6 245 aa16.88■□□□□ 0.29
UBE2D3-220ENST00000505307 SYT4Q9H2B2 425 aa16.88■□□□□ 0.29
UBE2D3-220ENST00000505307 C7orf69Q9H7B7 122 aa16.88■□□□□ 0.29
UBE2D3-220ENST00000505307 TMEM106BQ9NUM4 274 aa16.88■□□□□ 0.29
UBE2D3-220ENST00000505307 ZNF446Q9NWS9 450 aa16.88■□□□□ 0.29
UBE2D3-220ENST00000505307 UBAP1Q9NZ09 502 aa16.88■□□□□ 0.29
UBE2D3-220ENST00000505307 NDUFAF4Q9P032 175 aa16.88■□□□□ 0.29
UBE2D3-220ENST00000505307 IL19Q9UHD0 177 aa16.88■□□□□ 0.29
UBE2D3-220ENST00000505307 SAMD4AQ9UPU9 718 aaKnown RBP16.88■□□□□ 0.29
UBE2D3-220ENST00000505307 AURKCQ9UQB9 309 aa16.88■□□□□ 0.29
UBE2D3-220ENST00000505307 OR6C6A6NF89 314 aa16.87■□□□□ 0.29
UBE2D3-220ENST00000505307 IFNL4K9M1U5 179 aa16.87■□□□□ 0.29
UBE2D3-220ENST00000505307 TXNDC12O95881 172 aa16.87■□□□□ 0.29
UBE2D3-220ENST00000505307 IGHV2-70P01814 119 aa16.87■□□□□ 0.29
UBE2D3-220ENST00000505307 RAC2P15153 192 aa16.87■□□□□ 0.29
UBE2D3-220ENST00000505307 OMPP47874 163 aa16.87■□□□□ 0.29
UBE2D3-220ENST00000505307 COMPP49747 757 aaPredicted RBP16.87■□□□□ 0.29
UBE2D3-220ENST00000505307 RPS6KA3P51812 740 aa16.87■□□□□ 0.29
UBE2D3-220ENST00000505307 PSME3P61289 254 aa16.87■□□□□ 0.29
UBE2D3-220ENST00000505307 KRT72Q14CN4 511 aa16.87■□□□□ 0.29
UBE2D3-220ENST00000505307 KCNMB1Q16558 191 aa16.87■□□□□ 0.29
UBE2D3-220ENST00000505307 TMEM155Q4W5P6 130 aa16.87■□□□□ 0.29
UBE2D3-220ENST00000505307 FGD3Q5JSP0 725 aa16.87■□□□□ 0.29
UBE2D3-220ENST00000505307 DNM1P34Q6PK57 102 aa16.87■□□□□ 0.29
UBE2D3-220ENST00000505307 KLHL36Q8N4N3 616 aa16.87■□□□□ 0.29
UBE2D3-220ENST00000505307 ZNF283Q8N7M2 679 aa16.87■□□□□ 0.29
UBE2D3-220ENST00000505307 OR2Z1Q8NG97 314 aa16.87■□□□□ 0.29
UBE2D3-220ENST00000505307 OR1F12Q8NHA8 337 aa16.87■□□□□ 0.29
UBE2D3-220ENST00000505307 RASD2Q96D21 266 aa16.87■□□□□ 0.29
UBE2D3-220ENST00000505307 RSRC1Q96IZ7 334 aaKnown RBP16.87■□□□□ 0.29
UBE2D3-220ENST00000505307 ASH2LQ9UBL3 628 aa16.87■□□□□ 0.29
UBE2D3-220ENST00000505307 COA3Q9Y2R0 106 aaPredicted RBP16.87■□□□□ 0.29
UBE2D3-220ENST00000505307 STARD10Q9Y365 291 aa16.87■□□□□ 0.29
UBE2D3-220ENST00000505307 SBK2P0C263 348 aa16.86■□□□□ 0.29
UBE2D3-220ENST00000505307 NCK1P16333 377 aa16.86■□□□□ 0.29
UBE2D3-220ENST00000505307 CPT2P23786 658 aa16.86■□□□□ 0.29
UBE2D3-220ENST00000505307 FPR2P25090 351 aa16.86■□□□□ 0.29
UBE2D3-220ENST00000505307 CRABP1P29762 137 aa16.86■□□□□ 0.29
UBE2D3-220ENST00000505307 SMIM11AP58511 58 aa16.86■□□□□ 0.29
UBE2D3-220ENST00000505307 ACTG1P63261 375 aa16.86■□□□□ 0.29
UBE2D3-220ENST00000505307 GLYATQ6IB77 296 aa16.86■□□□□ 0.29
UBE2D3-220ENST00000505307 SLC27A4Q6P1M0 643 aa16.86■□□□□ 0.29
UBE2D3-220ENST00000505307 BPIFB2Q8N4F0 458 aa16.86■□□□□ 0.29
UBE2D3-220ENST00000505307 RERGLQ9H628 205 aa16.86■□□□□ 0.29
UBE2D3-220ENST00000505307 SPAG4Q9NPE6 437 aa16.86■□□□□ 0.29
UBE2D3-220ENST00000505307 DCAF13Q9NV06 445 aaKnown RBP16.86■□□□□ 0.29
UBE2D3-220ENST00000505307 POLR3KQ9Y2Y1 108 aaPredicted RBP16.86■□□□□ 0.29
UBE2D3-220ENST00000505307 IER3IP1Q9Y5U9 82 aa16.86■□□□□ 0.29
UBE2D3-220ENST00000505307 TANC2Q9HCD6 1990 aa16.86■□□□□ 0.29
UBE2D3-220ENST00000505307 UNC119BA6NIH7 251 aa16.85■□□□□ 0.29
UBE2D3-220ENST00000505307 PRDX6P30041 224 aa16.85■□□□□ 0.29
UBE2D3-220ENST00000505307 LCN2P80188 198 aa16.85■□□□□ 0.29
UBE2D3-220ENST00000505307 SPRNQ5BIV9 151 aa16.85■□□□□ 0.29
UBE2D3-220ENST00000505307 LRRC28Q86X40 367 aaPredicted RBP16.85■□□□□ 0.29
UBE2D3-220ENST00000505307 GJC3Q8NFK1 279 aa16.85■□□□□ 0.29
UBE2D3-220ENST00000505307 GCDHQ92947 438 aaPredicted RBP16.85■□□□□ 0.29
UBE2D3-220ENST00000505307 C7orf34Q96L11 122 aa16.85■□□□□ 0.29
UBE2D3-220ENST00000505307 DHRS1Q96LJ7 313 aa16.85■□□□□ 0.29
UBE2D3-220ENST00000505307 NUAK2Q9H093 628 aa16.85■□□□□ 0.29
UBE2D3-220ENST00000505307 POFUT1Q9H488 388 aa16.85■□□□□ 0.29
UBE2D3-220ENST00000505307 PATZ1Q9HBE1 687 aaKnown RBP16.85■□□□□ 0.29
UBE2D3-220ENST00000505307 OPN4Q9UHM6 478 aa16.85■□□□□ 0.29
UBE2D3-220ENST00000505307 PPP1R3CQ9UQK1 317 aa16.85■□□□□ 0.29
UBE2D3-220ENST00000505307 POLR1DQ9Y2S0 133 aa16.85■□□□□ 0.29
UBE2D3-220ENST00000505307 TMEM89A2RUT3 159 aa16.84■□□□□ 0.29
UBE2D3-220ENST00000505307 SOCS2O14508 198 aa16.84■□□□□ 0.29
UBE2D3-220ENST00000505307 IMPA2O14732 288 aa16.84■□□□□ 0.29
UBE2D3-220ENST00000505307 RGS9O75916 674 aaPredicted RBP16.84■□□□□ 0.29
UBE2D3-220ENST00000505307 CFPP27918 469 aa16.84■□□□□ 0.29
UBE2D3-220ENST00000505307 BTG1P62324 171 aa16.84■□□□□ 0.29
UBE2D3-220ENST00000505307 CCDC92Q53HC0 331 aaPredicted RBP16.84■□□□□ 0.29
UBE2D3-220ENST00000505307 SMARCD3Q6STE5 483 aa16.84■□□□□ 0.29
UBE2D3-220ENST00000505307 FBXW12Q6X9E4 464 aa16.84■□□□□ 0.29
UBE2D3-220ENST00000505307 Q6ZR03 302 aa16.84■□□□□ 0.29
UBE2D3-220ENST00000505307 POP5Q969H6 163 aaKnown RBP16.84■□□□□ 0.29
UBE2D3-220ENST00000505307 APOBEC3DQ96AK3 386 aaPredicted RBP16.84■□□□□ 0.29
UBE2D3-220ENST00000505307 HDHD2Q9H0R4 259 aa16.84■□□□□ 0.29
UBE2D3-220ENST00000505307 GORASP2Q9H8Y8 452 aa16.84■□□□□ 0.29
UBE2D3-220ENST00000505307 NTN4Q9HB63 628 aa16.84■□□□□ 0.29
UBE2D3-220ENST00000505307 EGFL7Q9UHF1 273 aa16.84■□□□□ 0.29
UBE2D3-220ENST00000505307 TRBV4-1A0A0J9YWV2 114 aa16.83■□□□□ 0.28
UBE2D3-220ENST00000505307 FSHBP01225 129 aa16.83■□□□□ 0.28
UBE2D3-220ENST00000505307 ADRA2CP18825 462 aa16.83■□□□□ 0.28
UBE2D3-220ENST00000505307 CDKN2AP42771 156 aaKnown RBP16.83■□□□□ 0.28
UBE2D3-220ENST00000505307 HIST1H3AP68431 136 aa16.83■□□□□ 0.28
UBE2D3-220ENST00000505307 HIST2H3PS2Q5TEC6 136 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms