RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 CCDC92Q53HC0 331 aaPredicted RBP10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 LCE2AQ5TA79 106 aaPredicted RBP10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 LCN1P1Q5VSP4 162 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 ZNF774Q6NX45 483 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 CORO6Q6QEF8 472 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 MEPCEQ7L2J0 689 aaKnown RBP10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 SHFQ7M4L6 423 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 GID4Q8IVV7 300 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 TIGD4Q8IY51 512 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 ZNF611Q8N823 705 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 ZNF555Q8NEP9 628 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 UBE2FQ969M7 185 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 ZMYND19Q96E35 227 aaPredicted RBP10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 INTS14Q96SY0 518 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 VCXQ9H320 206 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 ATPIF1Q9UII2 106 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 GDF2Q9UK05 429 aaPredicted RBP10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 POU2F3Q9UKI9 436 aa10.3□□□□□ -0.76
PDLIM5-208ENST00000504489 POLQO75417 2590 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 PDZD2O15018 2839 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 LOC100509620A0A075B734 347 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 SLC22A31A6NKX4 558 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 E7EQL1 145 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 H0YJX3 145 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 SYNGR3O43761 229 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 MPZL2O60487 215 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 DOK2O60496 412 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 PSKH1P11801 424 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 NR4A1P22736 598 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 PCSK6P29122 969 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 GDI2P50395 445 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 RPS7P62081 194 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 NKX6-1P78426 367 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 ADARB1P78563 741 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 ECH1Q13011 328 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 TMED1Q13445 227 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 GGTLC2Q14390 218 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 OCLNQ16625 522 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 ELFN2Q5R3F8 820 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 TTC23Q5W5X9 447 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 B3GLCTQ6Y288 498 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 CFAP77Q6ZQR2 320 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 BCDIN3DQ7Z5W3 292 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 ERI1Q8IV48 349 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 LINC00346Q8IVM7 164 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 DHRSXQ8N5I4 330 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 NUP37Q8NFH4 326 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 OR1F12Q8NHA8 337 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 NRG4Q8WWG1 115 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 NEUROG1Q92886 237 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 FBXW5Q969U6 566 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 MAP6Q96JE9 813 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 LURAP1Q96LR2 239 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 ZNF582Q96NG8 517 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 COQ7Q99807 217 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 DHRS9Q9BPW9 319 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 HDHD2Q9H0R4 259 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 ZFAND3Q9H8U3 227 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 UBTD1Q9HAC8 227 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 CDH20Q9HBT6 801 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 PNRC2Q9NPJ4 139 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 HAO2Q9NYQ3 351 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 CISD1Q9NZ45 108 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 WARS2Q9UGM6 360 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 SPEF1Q9Y4P9 236 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 ATP23Q9Y6H3 246 aa10.29□□□□□ -0.76
PDLIM5-208ENST00000504489 C5orf49A4QMS7 147 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 SELENOFO60613 162 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 ICMTO60725 284 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 SPARCP09486 303 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 CCL2P13500 99 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 GABRB1P18505 474 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 HTR1FP30939 366 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 RPS27P42677 84 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 HTR5AP47898 357 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 GALK2Q01415 458 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 MEDAGQ5VYS4 303 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 ZNF544Q6NX49 715 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 C20orf204Q6ZNR8 217 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 RHOUQ7L0Q8 258 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 SLC16A9Q7RTY1 509 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 DPY19L4Q7Z388 723 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 DCXRQ7Z4W1 244 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 PAQR4Q8N4S7 273 aaPredicted RBP10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 OR10S1Q8NGN2 331 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 OR6N2Q8NGY6 317 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 RHOXF1Q8NHV9 184 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 ST7LQ8TDW4 575 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 IPCEF1Q8WWN9 437 aaPredicted RBP10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 RFKQ969G6 155 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 ITPKCQ96DU7 683 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 APOL4Q9BPW4 351 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 YIPF3Q9GZM5 350 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 VCX3BQ9H321 246 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 ZNF442Q9H7R0 627 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 CA10Q9NS85 328 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 DDX28Q9NUL7 540 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 EDARQ9UNE0 448 aa10.28□□□□□ -0.76
PDLIM5-208ENST00000504489 VSTM5A8MXK1 200 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 H0YAE9 185 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms