RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 P2RX1P51575 399 aa2.04□□□□□ -2.08
SUB1-204ENST00000504016 DDX39BQ13838 428 aaKnown RBP2.04□□□□□ -2.08
SUB1-204ENST00000504016 ZNF266Q14584 549 aa2.04□□□□□ -2.08
SUB1-204ENST00000504016 MRPL23Q16540 153 aaKnown RBP2.04□□□□□ -2.08
SUB1-204ENST00000504016 MPV17L2Q567V2 206 aa2.04□□□□□ -2.08
SUB1-204ENST00000504016 RAET1LQ5VY80 246 aa2.04□□□□□ -2.08
SUB1-204ENST00000504016 TMEM107Q6UX40 140 aa2.04□□□□□ -2.08
SUB1-204ENST00000504016 MBOAT1Q6ZNC8 495 aa2.04□□□□□ -2.08
SUB1-204ENST00000504016 COL27A1Q8IZC6 1860 aaPredicted RBP2.04□□□□□ -2.08
SUB1-204ENST00000504016 OR13C2Q8NGS9 318 aa2.04□□□□□ -2.08
SUB1-204ENST00000504016 OR6N1Q8NGY5 312 aa2.04□□□□□ -2.08
SUB1-204ENST00000504016 OR13G1Q8NGZ3 307 aa2.04□□□□□ -2.08
SUB1-204ENST00000504016 GPR151Q8TDV0 419 aa2.04□□□□□ -2.08
SUB1-204ENST00000504016 ECHDC3Q96DC8 303 aa2.04□□□□□ -2.08
SUB1-204ENST00000504016 MICU1Q9BPX6 476 aa2.04□□□□□ -2.08
SUB1-204ENST00000504016 SULT4A1Q9BR01 284 aa2.04□□□□□ -2.08
SUB1-204ENST00000504016 ANP32EQ9BTT0 268 aa2.04□□□□□ -2.08
SUB1-204ENST00000504016 FGF23Q9GZV9 251 aaPredicted RBP2.04□□□□□ -2.08
SUB1-204ENST00000504016 OR51M1Q9H341 326 aa2.04□□□□□ -2.08
SUB1-204ENST00000504016 PTPRTO14522 1441 aa2.03□□□□□ -2.08
SUB1-204ENST00000504016 TRAV19A0A0A6YYK7 116 aa2.03□□□□□ -2.08
SUB1-204ENST00000504016 FAM47DPA6NHR8 397 aa2.03□□□□□ -2.08
SUB1-204ENST00000504016 ZNF716A6NP11 495 aa2.03□□□□□ -2.08
SUB1-204ENST00000504016 H0YJW9 148 aa2.03□□□□□ -2.08
SUB1-204ENST00000504016 BPY2O14599 106 aa2.03□□□□□ -2.08
SUB1-204ENST00000504016 POLR1CO15160 346 aaPredicted RBP2.03□□□□□ -2.08
SUB1-204ENST00000504016 NVLO15381 856 aaKnown RBP2.03□□□□□ -2.08
SUB1-204ENST00000504016 CD37P11049 281 aa2.03□□□□□ -2.08
SUB1-204ENST00000504016 ACTR3P61158 418 aa2.03□□□□□ -2.08
SUB1-204ENST00000504016 ADARB1P78563 741 aaKnown RBP2.03□□□□□ -2.08
SUB1-204ENST00000504016 ZNF616Q08AN1 781 aa2.03□□□□□ -2.08
SUB1-204ENST00000504016 OR7A5Q15622 319 aa2.03□□□□□ -2.08
SUB1-204ENST00000504016 GPR107Q5VW38 600 aa2.03□□□□□ -2.08
SUB1-204ENST00000504016 BRD3OSQ6XYD6 125 aa2.03□□□□□ -2.08
SUB1-204ENST00000504016 SLC16A13Q7RTY0 426 aa2.03□□□□□ -2.08
SUB1-204ENST00000504016 CALHM3Q86XJ0 350 aa2.03□□□□□ -2.08
SUB1-204ENST00000504016 SLC22A9Q8IVM8 553 aa2.03□□□□□ -2.08
SUB1-204ENST00000504016 CDKL3Q8IVW4 592 aaPredicted RBP2.03□□□□□ -2.08
SUB1-204ENST00000504016 TMEM256Q8N2U0 113 aa2.03□□□□□ -2.08
SUB1-204ENST00000504016 RTN4IP1Q8WWV3 396 aaPredicted RBP2.03□□□□□ -2.08
SUB1-204ENST00000504016 PTX4Q96A99 478 aa2.03□□□□□ -2.08
SUB1-204ENST00000504016 HSD17B10Q99714 261 aaKnown RBP2.03□□□□□ -2.08
SUB1-204ENST00000504016 CENPKQ9BS16 269 aa2.03□□□□□ -2.08
SUB1-204ENST00000504016 UXTQ9UBK9 157 aaPredicted RBP2.03□□□□□ -2.08
SUB1-204ENST00000504016 SIGLEC9Q9Y336 463 aa2.03□□□□□ -2.08
SUB1-204ENST00000504016 RRP15Q9Y3B9 282 aaKnown RBP2.03□□□□□ -2.08
SUB1-204ENST00000504016 S4R3C0 116 aa2.03□□□□□ -2.08
SUB1-204ENST00000504016 USP47Q96K76 1375 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 IGHV1OR15-9A0A0B4J2B8 117 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 A0A1B0GW55 424 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 LSM1O15116 133 aaKnown RBP2.02□□□□□ -2.09
SUB1-204ENST00000504016 KLHL41O60662 606 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 FKBP6O75344 327 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 REM1O75628 298 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 ZNF688P0C7X2 276 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 ZNF735P0CB33 412 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 DUX4L2P0CJ85 424 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 DUX4L3P0CJ86 424 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 DUX4L5P0CJ88 424 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 DUX4L6P0CJ89 424 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 DUX4L7P0CJ90 424 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 RAB3AP20336 220 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 ACLYP53396 1101 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 PRRX1P54821 245 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 TAS2R31P59538 309 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 PPP1CBP62140 327 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 SLC39A6Q13433 755 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 PPP1R7Q15435 360 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 AP1ARQ63HQ0 302 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 SLC8B1Q6J4K2 584 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 BHLHA15Q7RTS1 189 aaPredicted RBP2.02□□□□□ -2.09
SUB1-204ENST00000504016 MIR7-3HGQ8N6C7 128 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 COX18Q8N8Q8 333 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 AKR7LQ8NHP1 331 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 ZNF606Q8WXB4 792 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 DNAJC1Q96KC8 554 aaKnown RBP2.02□□□□□ -2.09
SUB1-204ENST00000504016 TBL1YQ9BQ87 522 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 ZNF717Q9BY31 904 aaPredicted RBP2.02□□□□□ -2.09
SUB1-204ENST00000504016 DUX4Q9UBX2 424 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 RABL2BQ9UNT1 228 aa2.02□□□□□ -2.09
SUB1-204ENST00000504016 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.01□□□□□ -2.09
SUB1-204ENST00000504016 CCDC169A6NNP5 214 aa2.01□□□□□ -2.09
SUB1-204ENST00000504016 NDUFC2-KCTD14E9PQ53 114 aa2.01□□□□□ -2.09
SUB1-204ENST00000504016 H7C417 338 aa2.01□□□□□ -2.09
SUB1-204ENST00000504016 CLOCKO15516 846 aa2.01□□□□□ -2.09
SUB1-204ENST00000504016 UQCRFS1P1P0C7P4 283 aa2.01□□□□□ -2.09
SUB1-204ENST00000504016 LOXP28300 417 aaPredicted RBP2.01□□□□□ -2.09
SUB1-204ENST00000504016 EIF3EP60228 445 aaKnown RBP2.01□□□□□ -2.09
SUB1-204ENST00000504016 STXBP1P61764 594 aaKnown RBP2.01□□□□□ -2.09
SUB1-204ENST00000504016 CDK5Q00535 292 aa2.01□□□□□ -2.09
SUB1-204ENST00000504016 DGCR6Q14129 220 aa2.01□□□□□ -2.09
SUB1-204ENST00000504016 ZNF726P1Q15940 193 aa2.01□□□□□ -2.09
SUB1-204ENST00000504016 NANOGNBQ7Z5D8 188 aa2.01□□□□□ -2.09
SUB1-204ENST00000504016 MRPL55Q7Z7F7 128 aaKnown RBP2.01□□□□□ -2.09
SUB1-204ENST00000504016 FAM228AQ86W67 206 aa2.01□□□□□ -2.09
SUB1-204ENST00000504016 NKAIN4Q8IVV8 208 aa2.01□□□□□ -2.09
SUB1-204ENST00000504016 CMTM1Q8IZ96 169 aa2.01□□□□□ -2.09
SUB1-204ENST00000504016 LINC00304Q8N9R0 145 aa2.01□□□□□ -2.09
SUB1-204ENST00000504016 OR2A1Q8NGT9 310 aa2.01□□□□□ -2.09
SUB1-204ENST00000504016 SLC25A46Q96AG3 418 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms