RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 TIMM50Q3ZCQ8 353 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 C9orf135Q5VTT2 229 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 NSUN5P2Q63ZY6 315 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 ASPHD2Q6ICH7 369 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 ZNF585AQ6P3V2 769 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 VWA1Q6PCB0 445 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 KLHL24Q6TFL4 600 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 PCSK4Q6UW60 755 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 FAM180AQ6UWF9 173 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 UNQ9370/PRO34162Q6UXP9 181 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 TFAP2EQ6VUC0 442 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 GDPGP1Q6ZNW5 385 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 ZNF627Q7L945 461 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 CHMP1BQ7LBR1 199 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 FAM220AQ7Z4H9 259 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 KRT77Q7Z794 578 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 CD163Q86VB7 1156 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 NR2C2APQ86WQ0 139 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 CATSPERDQ86XM0 798 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 SKA3Q8IX90 412 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 RDH10Q8IZV5 341 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 LRRC18Q8N456 261 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 KDF1Q8NAX2 398 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 NAXEQ8NCW5 288 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 OR10H5Q8NGA6 315 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 OR51A4Q8NGJ6 313 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 MBD3L2Q8NHZ7 208 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 ABHD4Q8TB40 342 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 APH1AQ96BI3 265 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 ORAI1Q96D31 301 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 SNRNP40Q96DI7 357 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 FOXB1Q99853 325 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 SH3GL3Q99963 347 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 C1orf198Q9H425 327 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 C12orf49Q9H741 205 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 SIAEQ9HAT2 523 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 NOX3Q9HBY0 568 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 EXOSC4Q9NPD3 245 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 ZNF319Q9P2F9 582 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 MALT1Q9UDY8 824 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 SSR3Q9UNL2 185 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 SLC22A13Q9Y226 551 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 R4GMQ9 66 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 DSPP15924 2871 aaKnown RBP6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 ATRXP46100 2492 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 PKD1L2Q7Z442 2459 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 ITPR1Q14643 2758 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 A0A0G2JK05 382 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 TRBV5-5A0A0J9YX44 114 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 SMIM30A4D0T7 59 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 OR6C6A6NF89 314 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 ACOD1A6NK06 481 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 AHRRA9YTQ3 701 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 ZNF878C9JN71 531 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 SYNGR3O43761 229 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 DOK2O60496 412 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 ZNF254O75437 659 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 TNFSF13O75888 250 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 CGAP01215 116 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 HLA-DPB1P04440 258 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 CST2P09228 141 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 TACSTD2P09758 323 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 UCHL1P09936 223 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 ZNF32P17041 273 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 NPR2P20594 1047 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 CRYGSP22914 178 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 OTX1P32242 354 aaPredicted RBP6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 SDC2P34741 201 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 ZNF84P51523 738 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 CCR9P51686 369 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 RIDAP52758 137 aaKnown RBP6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 PSMA6P60900 246 aaKnown RBP6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 FAPQ12884 760 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 STK11Q15831 433 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 ACSM3Q53FZ2 586 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 KRTCAP3Q53RY4 240 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 ZMAT1Q5H9K5 638 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 KCTD18Q6PI47 426 aaPredicted RBP6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 DEGS2Q6QHC5 323 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 USP43Q70EL4 1123 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 FAM214BQ7L5A3 538 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 PRSS45Q7RTY3 260 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 P4HA3Q7Z4N8 544 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 MCEMP1Q8IX19 187 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 SLC22A24Q8N4F4 322 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 KBTBD8Q8NFY9 601 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 FAM57AQ8TBR7 257 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 TBC1D15Q8TC07 691 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 SLC7A6Q92536 515 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 MRPL48Q96GC5 212 aaKnown RBP6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 DERL3Q96Q80 235 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 OR14A2Q96R54 314 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 GFI1Q99684 422 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 MED18Q9BUE0 208 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 CDADC1Q9BWV3 514 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 MROQ9BYG7 248 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 NXF2Q9GZY0 626 aaKnown RBP6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 WNT5BQ9H1J7 359 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 B3GAT2Q9NPZ5 323 aa6.04□□□□□ -1.44
TOPBP1-203ENST00000503464 GLRX2Q9NS18 164 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms