RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 SFXN2Q96NB2 322 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 WDR77Q9BQA1 342 aaPredicted RBP8.8□□□□□ -1
CLIP1-204ENST00000501271 EMC6Q9BV81 110 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 TMPRSS13Q9BYE2 586 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 MRPS17Q9Y2R5 130 aaKnown RBP8.8□□□□□ -1
CLIP1-204ENST00000501271 EML6Q6ZMW3 1958 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 MED12Q93074 2177 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 LOC390937A0A1W2PQ73 354 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 LIPT2A6NK58 231 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 MCRIP1C9JLW8 97 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 M0QYG6 137 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 ALOX12BO75342 701 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 AQP8O94778 261 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 EIF1AXP47813 144 aaKnown RBP8.8□□□□□ -1
CLIP1-204ENST00000501271 AP2S1P53680 142 aaPredicted RBP8.8□□□□□ -1
CLIP1-204ENST00000501271 SUMO3P55854 103 aaPredicted RBP8.8□□□□□ -1
CLIP1-204ENST00000501271 TAS2R19P59542 299 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 SSBP1Q04837 148 aaKnown RBP8.8□□□□□ -1
CLIP1-204ENST00000501271 MFSD13AQ14CX5 517 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 NKAIN1Q4KMZ8 207 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 PAPD4Q6PIY7 484 aaKnown RBP8.8□□□□□ -1
CLIP1-204ENST00000501271 RFPL4BQ6ZWI9 263 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 NUBPLQ8TB37 319 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 DDIT4LQ96D03 193 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 C5orf34Q96MH7 638 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 OR6C1Q96RD1 312 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 TINAGL1Q9GZM7 467 aaPredicted RBP8.8□□□□□ -1
CLIP1-204ENST00000501271 EXO5Q9H790 373 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 CENPMQ9NSP4 180 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 PI4KAP42356 2102 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 NPIPB13A6NJU9 1138 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 NPIPB4C9JG80 1138 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 I3L521 148 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 SHOXO15266 292 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 ARPC5O15511 151 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 ZNF208O43345 1280 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 ITGB2P05107 769 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 H2BFMP0C1H6 154 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 BIDP55957 195 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 PMPCAQ10713 525 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 SFRP5Q5T4F7 317 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 CHMP1BQ7LBR1 199 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 RABEPKQ7Z6M1 372 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 RNF138Q8WVD3 245 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 TNFAIP8L1Q8WVP5 186 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 RNF133Q8WVZ7 376 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 C11orf40Q8WZ69 217 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 MARVELD3Q96A59 401 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 GSX2Q9BZM3 304 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 POFUT1Q9H488 388 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 TMEM138Q9NPI0 162 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 SERINC1Q9NRX5 453 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 FAM206AQ9NX38 181 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 KLRF1Q9NZS2 232 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 B3GAT1Q9P2W7 334 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 KLK13Q9UKR3 277 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 A0A1W2PPL8 197 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 MEGF11A6BM72 1044 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 TMEM235A6NFC5 223 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 WIPF3A6NGB9 483 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 VSTM2BA6NLU5 285 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 POM121CA8CG34 1229 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 F5H5P2 479 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 SULT1C2O00338 296 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 TNRC18O15417 2968 aaPredicted RBP8.79□□□□□ -1
CLIP1-204ENST00000501271 RAB3DO95716 219 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 PDGFAP04085 211 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 ACSM4P0C7M7 580 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 UBCP0CG48 685 aaKnown RBP8.79□□□□□ -1
CLIP1-204ENST00000501271 RRASP10301 218 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 ZNF250P15622 560 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 PTGDSP41222 190 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 STARD6P59095 220 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 SEC61A1P61619 476 aaKnown RBP8.79□□□□□ -1
CLIP1-204ENST00000501271 INPP5JQ15735 1006 aaPredicted RBP8.79□□□□□ -1
CLIP1-204ENST00000501271 C4orf46Q504U0 113 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 NHLRC3Q5JS37 347 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 C1orf100Q5SVJ3 147 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 TMEM71Q6P5X7 295 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 C3P1Q6ZMU1 363 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 ZNF704Q6ZNC4 412 aaPredicted RBP8.79□□□□□ -1
CLIP1-204ENST00000501271 IDO2Q6ZQW0 420 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 TMEM229BQ8NBD8 167 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 ACBD4Q8NC06 268 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 OR10S1Q8NGN2 331 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 ALKBH4Q9NXW9 302 aa8.79□□□□□ -1
CLIP1-204ENST00000501271 FRYLO94915 3013 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 OR6C65A6NJZ3 312 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 ETV2O00321 342 aaPredicted RBP8.78□□□□□ -1
CLIP1-204ENST00000501271 SCRG1O75711 98 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 TTRP02766 147 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 OPN1LWP04000 364 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 AMY2AP04746 511 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 ZNF735P0CB33 412 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 POU3F2P20265 443 aaPredicted RBP8.78□□□□□ -1
CLIP1-204ENST00000501271 MMP16P51512 607 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 MYBPHQ13203 477 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 NR0B2Q15466 257 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 SMAD2Q15796 467 aaKnown RBP8.78□□□□□ -1
CLIP1-204ENST00000501271 AANATQ16613 207 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms