RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 TMEM120BA0PK00 339 aa1.44□□□□□ -2.18
SMC4-227ENST00000497984 BTBD17A6NE02 478 aa1.44□□□□□ -2.18
SMC4-227ENST00000497984 CLPXO76031 633 aa1.44□□□□□ -2.18
SMC4-227ENST00000497984 SLC22A5O76082 557 aa1.44□□□□□ -2.18
SMC4-227ENST00000497984 IL1BP01584 269 aa1.44□□□□□ -2.18
SMC4-227ENST00000497984 SERPIND1P05546 499 aa1.44□□□□□ -2.18
SMC4-227ENST00000497984 MX1P20591 662 aa1.44□□□□□ -2.18
SMC4-227ENST00000497984 P2RX1P51575 399 aa1.44□□□□□ -2.18
SMC4-227ENST00000497984 TAS2R31P59538 309 aa1.44□□□□□ -2.18
SMC4-227ENST00000497984 PLP1P60201 277 aa1.44□□□□□ -2.18
SMC4-227ENST00000497984 BST2Q10589 180 aaKnown RBP1.44□□□□□ -2.18
SMC4-227ENST00000497984 SNRNP35Q16560 246 aaKnown RBP1.44□□□□□ -2.18
SMC4-227ENST00000497984 PPP1R42Q7Z4L9 355 aa1.44□□□□□ -2.18
SMC4-227ENST00000497984 ZNF664Q8N3J9 261 aa1.44□□□□□ -2.18
SMC4-227ENST00000497984 SDR9C7Q8NEX9 313 aa1.44□□□□□ -2.18
SMC4-227ENST00000497984 OR2L3Q8NG85 312 aa1.44□□□□□ -2.18
SMC4-227ENST00000497984 DCPSQ96C86 337 aaKnown RBP1.44□□□□□ -2.18
SMC4-227ENST00000497984 TRIM44Q96DX7 344 aaPredicted RBP1.44□□□□□ -2.18
SMC4-227ENST00000497984 GON7Q9BXV9 100 aa1.44□□□□□ -2.18
SMC4-227ENST00000497984 DHCR7Q9UBM7 475 aaKnown RBP1.44□□□□□ -2.18
SMC4-227ENST00000497984 SLC7A8Q9UHI5 535 aa1.44□□□□□ -2.18
SMC4-227ENST00000497984 CTNNA3Q9UI47 895 aa1.44□□□□□ -2.18
SMC4-227ENST00000497984 LTBP4Q8N2S1 1624 aa1.44□□□□□ -2.18
SMC4-227ENST00000497984 TRAV19A0A0A6YYK7 116 aa1.43□□□□□ -2.18
SMC4-227ENST00000497984 IGLV1-36A0A0B4J1U3 117 aa1.43□□□□□ -2.18
SMC4-227ENST00000497984 FAM47DPA6NHR8 397 aa1.43□□□□□ -2.18
SMC4-227ENST00000497984 BTNL10A8MVZ5 291 aa1.43□□□□□ -2.18
SMC4-227ENST00000497984 FOXE1O00358 373 aaPredicted RBP1.43□□□□□ -2.18
SMC4-227ENST00000497984 SEMA3DO95025 777 aa1.43□□□□□ -2.18
SMC4-227ENST00000497984 IGHV3-11P01762 117 aa1.43□□□□□ -2.18
SMC4-227ENST00000497984 HLA-DQB1P01920 261 aa1.43□□□□□ -2.18
SMC4-227ENST00000497984 ZNF43P17038 809 aa1.43□□□□□ -2.18
SMC4-227ENST00000497984 PSMB5P28074 263 aa1.43□□□□□ -2.18
SMC4-227ENST00000497984 HNMTP50135 292 aa1.43□□□□□ -2.18
SMC4-227ENST00000497984 GDI2P50395 445 aaKnown RBP1.43□□□□□ -2.18
SMC4-227ENST00000497984 GBX2P52951 348 aaPredicted RBP1.43□□□□□ -2.18
SMC4-227ENST00000497984 RPS11P62280 158 aaKnown RBP eCLIP1.43□□□□□ -2.188e-17■■■■■ 578.9
SMC4-227ENST00000497984 PRR3P79522 188 aaKnown RBP1.43□□□□□ -2.18
SMC4-227ENST00000497984 CDK5Q00535 292 aa1.43□□□□□ -2.18
SMC4-227ENST00000497984 BAMBIQ13145 260 aa1.43□□□□□ -2.18
SMC4-227ENST00000497984 CHIT1Q13231 466 aa1.43□□□□□ -2.18
SMC4-227ENST00000497984 OR7A5Q15622 319 aa1.43□□□□□ -2.18
SMC4-227ENST00000497984 KDELC1Q6UW63 502 aa1.43□□□□□ -2.18
SMC4-227ENST00000497984 SLC35G3Q8N808 338 aa1.43□□□□□ -2.18
SMC4-227ENST00000497984 SPATA4Q8NEY3 305 aa1.43□□□□□ -2.18
SMC4-227ENST00000497984 TTLQ8NG68 377 aa1.43□□□□□ -2.18
SMC4-227ENST00000497984 OR8J1Q8NGP2 316 aa1.43□□□□□ -2.18
SMC4-227ENST00000497984 IP6K3Q96PC2 410 aa1.43□□□□□ -2.18
SMC4-227ENST00000497984 FGF23Q9GZV9 251 aaPredicted RBP1.43□□□□□ -2.18
SMC4-227ENST00000497984 SLC38A10Q9HBR0 1119 aa1.43□□□□□ -2.18
SMC4-227ENST00000497984 ZNF230Q9UIE0 474 aaPredicted RBP1.43□□□□□ -2.18
SMC4-227ENST00000497984 LSM7Q9UK45 103 aaKnown RBP1.43□□□□□ -2.18
SMC4-227ENST00000497984 PALLDQ8WX93 1383 aa1.43□□□□□ -2.18
SMC4-227ENST00000497984 SDK2Q58EX2 2172 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 A0A1B0GW55 424 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 C5orf63A6NC05 138 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 GPR89AB7ZAQ6 455 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 PPP1R2P9O14990 202 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 GLAP06280 429 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 GPR89BP0CG08 455 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 DUX4L2P0CJ85 424 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 DUX4L3P0CJ86 424 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 DUX4L5P0CJ88 424 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 DUX4L6P0CJ89 424 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 DUX4L7P0CJ90 424 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 ERGP11308 486 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 ZNF250P15622 560 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 CSNK1EP49674 416 aaKnown RBP1.42□□□□□ -2.18
SMC4-227ENST00000497984 CDH6P55285 790 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 PPP1CBP62140 327 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 PGGHGQ32M88 737 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 ANKDD1AQ495B1 522 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 UBE2UQ5VVX9 321 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 ADNP2Q6IQ32 1131 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 CERS6Q6ZMG9 384 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 TMEM150AQ86TG1 271 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 NT5DC3Q86UY8 548 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 ZCCHC7Q8N3Z6 543 aaKnown RBP1.42□□□□□ -2.18
SMC4-227ENST00000497984 COX18Q8N8Q8 333 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 FBXL13Q8NEE6 735 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 B3GNT7Q8NFL0 401 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 OR5M1Q8NGP8 315 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 TM2D3Q9BRN9 247 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 CHCHD7Q9BUK0 85 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 ZSCAN16Q9H4T2 348 aaPredicted RBP1.42□□□□□ -2.18
SMC4-227ENST00000497984 LRRC40Q9H9A6 602 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 DUX4Q9UBX2 424 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 SUN2Q9UH99 717 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 SIGLEC7Q9Y286 467 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 MMACHCQ9Y4U1 282 aa1.42□□□□□ -2.18
SMC4-227ENST00000497984 AKNAQ7Z591 1439 aa1.41□□□□□ -2.18
SMC4-227ENST00000497984 SEC16AO15027 2179 aa1.41□□□□□ -2.18
SMC4-227ENST00000497984 IGHV3-72A0A0B4J1Y9 119 aa1.41□□□□□ -2.18
SMC4-227ENST00000497984 IGHV1-3A0A0C4DH29 117 aa1.41□□□□□ -2.18
SMC4-227ENST00000497984 LRRIQ3A6PVS8 624 aaPredicted RBP1.41□□□□□ -2.18
SMC4-227ENST00000497984 POLR1CO15160 346 aaPredicted RBP1.41□□□□□ -2.18
SMC4-227ENST00000497984 NUPL2O15504 423 aaKnown RBP1.41□□□□□ -2.18
SMC4-227ENST00000497984 CHMP2AO43633 222 aa1.41□□□□□ -2.18
SMC4-227ENST00000497984 KLHL41O60662 606 aa1.41□□□□□ -2.18
SMC4-227ENST00000497984 CLIC3O95833 236 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms