RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 F8VWA3 439 aa11.8□□□□□ -0.52
GAPVD1-220ENST00000497580 SOX1O00570 391 aaPredicted RBP11.8□□□□□ -0.52
GAPVD1-220ENST00000497580 P2RX6O15547 441 aa11.8□□□□□ -0.52
GAPVD1-220ENST00000497580 SCGB1D2O95969 90 aa11.8□□□□□ -0.52
GAPVD1-220ENST00000497580 PCCBP05166 539 aa11.8□□□□□ -0.52
GAPVD1-220ENST00000497580 FABP4P15090 132 aa11.8□□□□□ -0.52
GAPVD1-220ENST00000497580 RAB32Q13637 225 aa11.8□□□□□ -0.52
GAPVD1-220ENST00000497580 DEFB134Q4QY38 66 aa11.8□□□□□ -0.52
GAPVD1-220ENST00000497580 EIF5AL1Q6IS14 154 aaKnown RBP11.8□□□□□ -0.52
GAPVD1-220ENST00000497580 FJX1Q86VR8 437 aa11.8□□□□□ -0.52
GAPVD1-220ENST00000497580 OR2L2Q8NH16 312 aa11.8□□□□□ -0.52
GAPVD1-220ENST00000497580 PRRT1Q99946 306 aa11.8□□□□□ -0.52
GAPVD1-220ENST00000497580 SLC46A2Q9BY10 475 aa11.8□□□□□ -0.52
GAPVD1-220ENST00000497580 IGKV1-8A0A0C4DH67 115 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 ZNF727A8MUV8 499 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 C1QTNF3-AMACRE9PGA6 284 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 PHOX2AO14813 284 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 UPK3AO75631 287 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 PLGP00747 810 aaPredicted RBP11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 ZNF735P0CB33 412 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 CDKN2AP42771 156 aaKnown RBP11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 NPY4RP50391 375 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 TRA2BP62995 288 aaKnown RBP11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 SLC25A42Q86VD7 318 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 GATSQ8NAP1 163 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 OR56B1Q8NGI3 324 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 EGLN1Q9GZT9 426 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 WDR76Q9H967 626 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 OR52A4PA6NMU1 304 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 METTL12A8MUP2 240 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 ZNF354AO60765 605 aaPredicted RBP11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 C8AP07357 584 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 SNRPCP09234 159 aaKnown RBP11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 CPMP14384 443 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 CTNNB1P35222 781 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 EMDP50402 254 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 OR14K1Q8NGZ2 314 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 ADAMTS17Q8TE56 1095 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 DPEP2Q9H4A9 486 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 KCNJ16Q9NPI9 418 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 TAS2R4Q9NYW5 299 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 APOBEC3BQ9UH17 382 aaKnown RBP11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 KCNK6Q9Y257 313 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 HCFC2Q9Y5Z7 792 aa11.79□□□□□ -0.52
GAPVD1-220ENST00000497580 A0A1W2PPV9 198 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 GLCEO94923 617 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 LYPD3O95274 346 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 HTR2CP28335 458 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 PPICP45877 212 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 FHITP49789 147 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 ARHGAP11BQ3KRB8 267 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 POMZP3Q6PJE2 187 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 REC114Q7Z4M0 266 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 ZNF679Q8IYX0 411 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 OR2L5Q8NG80 312 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 OR51A2Q8NGJ7 313 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 TCEAL2Q9H3H9 227 aaPredicted RBP11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 SEC16AO15027 2179 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 DENND4CQ5VZ89 1909 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 IFITM10A6NMD0 228 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 OR4C45A6NMZ5 311 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 SOX15O60248 233 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 DNAJB6O75190 326 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 C1QL1O75973 258 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 SPNS3Q6ZMD2 512 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 MFSD8Q8NHS3 518 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 TIMM10BQ9Y5J6 103 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 RAP1AP62834 184 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 PRDX1Q06830 199 aaKnown RBP11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 GUK1Q16774 197 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 WDR38Q5JTN6 314 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 ZNF343Q6P1L6 599 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 RD3Q7Z3Z2 195 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 NAXEQ8NCW5 288 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 PHOSPHO2Q8TCD6 241 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 ZNF681Q96N22 645 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 PRDM13Q9H4Q3 707 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 CES1P1Q9UKY3 287 aa11.78□□□□□ -0.52
GAPVD1-220ENST00000497580 SLC17A2O00624 439 aa11.77□□□□□ -0.52
GAPVD1-220ENST00000497580 CD5P06127 495 aa11.77□□□□□ -0.52
GAPVD1-220ENST00000497580 FCGR3AP08637 254 aa11.77□□□□□ -0.52
GAPVD1-220ENST00000497580 CDX1P47902 265 aaPredicted RBP11.77□□□□□ -0.52
GAPVD1-220ENST00000497580 TMEM215Q68D42 235 aa11.77□□□□□ -0.52
GAPVD1-220ENST00000497580 RAB42Q8N4Z0 105 aa11.77□□□□□ -0.52
GAPVD1-220ENST00000497580 AMELYQ99218 206 aa11.77□□□□□ -0.52
GAPVD1-220ENST00000497580 SLC17A9Q9BYT1 436 aa11.77□□□□□ -0.52
GAPVD1-220ENST00000497580 CKLFQ9UBR5 152 aa11.77□□□□□ -0.52
GAPVD1-220ENST00000497580 CA14Q9ULX7 337 aa11.77□□□□□ -0.52
GAPVD1-220ENST00000497580 DHDHQ9UQ10 334 aa11.77□□□□□ -0.52
GAPVD1-220ENST00000497580 PPP1R2P9O14990 202 aa11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 ZNF888P0CJ79 500 aaPredicted RBP11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 HOXA5P20719 270 aa11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 CTXN1P60606 82 aa11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 NFATC4Q14934 902 aa11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 KIRREL2Q6UWL6 708 aa11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 DRAM2Q6UX65 266 aa11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 DNM1P46Q6ZS02 220 aa11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 ZNF426Q9BUY5 554 aa11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 ELOVL3Q9HB03 270 aa11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 ENTPD2Q9Y5L3 495 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms