RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 TMED10P49755 219 aaKnown RBP3.63□□□□□ -1.83
SF3B1-212ENST00000496458 SKP1P63208 163 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 ITGB3BPQ13352 177 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-212ENST00000496458 ORC2Q13416 577 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-212ENST00000496458 GNA13Q14344 377 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 ZNF77Q15935 545 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 KLHL38Q2WGJ6 581 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 XKR4Q5GH76 650 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 OR2B11Q5JQS5 317 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 EOGTQ5NDL2 527 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 STUMQ69YW2 141 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 ZNF470Q6ECI4 717 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 BTNL3Q6UXE8 466 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 CMTM8Q8IZV2 173 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 C17orf78Q8N4C9 275 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 NAT6Q93015 286 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 ART4Q93070 314 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 TADA1Q96BN2 335 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 TMA16Q96EY4 203 aaKnown RBP3.63□□□□□ -1.83
SF3B1-212ENST00000496458 GLT1D1Q96MS3 346 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 NOL4LQ96MY1 436 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-212ENST00000496458 RACGAP1Q9H0H5 632 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 GOLPH3Q9H4A6 298 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 NMRAL1Q9HBL8 299 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 ADAP2Q9NPF8 381 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 INPP5EQ9NRR6 644 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 EHFQ9NZC4 300 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 RPL26L1Q9UNX3 145 aaKnown RBP3.63□□□□□ -1.83
SF3B1-212ENST00000496458 EXOSC1Q9Y3B2 195 aaKnown RBP3.63□□□□□ -1.83
SF3B1-212ENST00000496458 C4AP0C0L4 1744 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 LRRK1Q38SD2 2015 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 AFDNP55196 1824 aaKnown RBP3.63□□□□□ -1.83
SF3B1-212ENST00000496458 LRP5O75197 1615 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 CHD4Q14839 1912 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 SMIM31A0A1B0GVY4 71 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 PVALEFA0A1B0GWK0 134 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 E9PLD3 99 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 F5H6K3 240 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 CHST1O43916 411 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 MYO1DO94832 1006 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 DIRAS1O95057 198 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 CA1P00915 261 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-212ENST00000496458 IGHG4P01861 327 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 P04436 131 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 HOXB8P17481 243 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-212ENST00000496458 CFL1P23528 166 aaKnown RBP3.62□□□□□ -1.83
SF3B1-212ENST00000496458 IL12BP29460 328 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 CBX5P45973 191 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 BDKRB1P46663 353 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 NPBWR2P48146 333 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 S100A12P80511 92 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 RELAQ04206 551 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 KLRC3Q07444 240 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 SIGLEC14Q08ET2 396 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 MOGQ16653 247 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 SLC25A52Q3SY17 297 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 TP53I3Q53FA7 332 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 CYBRD1Q53TN4 286 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 C1orf220Q5T0J3 134 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 C22orf42Q6IC83 251 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 CYS1Q717R9 158 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 ARCQ7LC44 396 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 HDDC2Q7Z4H3 204 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 HSD17B13Q7Z5P4 300 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-212ENST00000496458 SELENOHQ8IZQ5 122 aaKnown RBP3.62□□□□□ -1.83
SF3B1-212ENST00000496458 OR4F6Q8NGB9 312 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 OR4A4PQ8NGN8 299 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 FAM110BQ8TC76 370 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 FAM104AQ969W3 186 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 TIMD4Q96H15 378 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 JSRP1Q96MG2 331 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-212ENST00000496458 TSSK3Q96PN8 268 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 NIPSNAP3BQ9BS92 247 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 ANGPTL4Q9BY76 406 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 SHCBP1LQ9BZQ2 653 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 NXF5Q9H1B4 397 aaKnown RBP3.62□□□□□ -1.83
SF3B1-212ENST00000496458 LRRC19Q9H756 370 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 UGT1A10Q9HAW8 530 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 SLC38A10Q9HBR0 1119 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 IFNKQ9P0W0 207 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 MAP3K15Q6ZN16 1313 aa3.62□□□□□ -1.83
SF3B1-212ENST00000496458 CICQ96RK0 1608 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-212ENST00000496458 COL24A1Q17RW2 1714 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 LAMB4A4D0S4 1761 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 N4BP2Q86UW6 1770 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-212ENST00000496458 DHRS7CA6NNS2 312 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 ERVV-1B6SEH8 477 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 G3V4G9 280 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 GOLGA8RI6L899 631 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 RAB29O14966 203 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 TM9SF1O15321 606 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 RAMP1O60894 148 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 HUS1O60921 280 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 F10P00742 488 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 CALM1P0DP23 149 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 CALM2P0DP24 149 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 CALM3P0DP25 149 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 MYL2P10916 166 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 BCKDHAP12694 445 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 CD82P27701 267 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms