RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 RPA2P15927 270 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 LTBRP36941 435 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 DNASE1L1P49184 302 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 POLR2HP52434 150 aaKnown RBP11.65□□□□□ -0.54
PTPN7-217ENST00000495688 ELOCQ15369 112 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 MPPED2Q15777 294 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 OR52W1Q6IF63 320 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 ATRAIDQ6UW56 229 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 OVCH2Q7RTZ1 564 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 ADGRE4PQ86SQ3 457 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 TMEM229BQ8NBD8 167 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 OR6K3Q8NGY3 331 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 CYYR1Q96J86 154 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 ALX4Q9H161 411 aaPredicted RBP11.65□□□□□ -0.54
PTPN7-217ENST00000495688 G6PC2Q9NQR9 355 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 MED9Q9NWA0 146 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 MED29Q9NX70 200 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 PRELID1Q9Y255 219 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 PHF3Q92576 2039 aaKnown RBP11.65□□□□□ -0.54
PTPN7-217ENST00000495688 OR5H14A6NHG9 310 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 A8MVM7 634 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 KCNAB3O43448 404 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 EIF1AXP47813 144 aaKnown RBP11.65□□□□□ -0.54
PTPN7-217ENST00000495688 ARHGDIBP52566 201 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 THAP3Q8WTV1 239 aaPredicted RBP11.65□□□□□ -0.54
PTPN7-217ENST00000495688 PMEPA1Q969W9 287 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 CENPMQ9NSP4 180 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 MKL2Q9ULH7 1088 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 ATXN7L1Q9ULK2 861 aaPredicted RBP11.65□□□□□ -0.54
PTPN7-217ENST00000495688 HHLA2Q9UM44 414 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 MMACHCQ9Y4U1 282 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 TMEM269A0A1B0GVZ9 245 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 LDLRAD4O15165 306 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 EIF4E2O60573 245 aaKnown RBP11.64□□□□□ -0.55
PTPN7-217ENST00000495688 HLA-AP01891 365 aaKnown RBP11.64□□□□□ -0.55
PTPN7-217ENST00000495688 MYF5P13349 255 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 C3orf33Q6P1S2 294 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 SLC26A10Q8NG04 563 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 OR1L3Q8NH93 324 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 LHFPL5Q8TAF8 219 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 MRGPRFQ96AM1 343 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 ZNF75AQ96N20 296 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 C8orf33Q9H7E9 229 aaPredicted RBP11.64□□□□□ -0.55
PTPN7-217ENST00000495688 OR52A1Q9UKL2 312 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 VSIG4Q9Y279 399 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 NOP16Q9Y3C1 178 aaKnown RBP11.64□□□□□ -0.55
PTPN7-217ENST00000495688 R4GMQ9 66 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 ASCC3Q8N3C0 2202 aaKnown RBP11.64□□□□□ -0.55
PTPN7-217ENST00000495688 LILRA5A6NI73 299 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 SHISA8B8ZZ34 492 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 KRBOX1C9JBD0 128 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 ZNF354AO60765 605 aaPredicted RBP11.64□□□□□ -0.55
PTPN7-217ENST00000495688 AHSA1O95433 338 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 HPP00738 406 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 NME1P15531 152 aaKnown RBP11.64□□□□□ -0.55
PTPN7-217ENST00000495688 ARRB1P49407 418 aaPredicted RBP11.64□□□□□ -0.55
PTPN7-217ENST00000495688 BAMBIQ13145 260 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 SMAD2Q15796 467 aaKnown RBP11.64□□□□□ -0.55
PTPN7-217ENST00000495688 PAPD4Q6PIY7 484 aaKnown RBP11.64□□□□□ -0.55
PTPN7-217ENST00000495688 ARSKQ6UWY0 536 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 CFAP77Q6ZQR2 320 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 BOLLQ8N9W6 283 aaKnown RBP11.64□□□□□ -0.55
PTPN7-217ENST00000495688 ST7LQ8TDW4 575 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 CCDC107Q8WV48 283 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 ST8SIA2Q92186 375 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 THRSPQ92748 146 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 SLC25A21Q9BQT8 299 aaPredicted RBP11.64□□□□□ -0.55
PTPN7-217ENST00000495688 TMEM185BQ9H7F4 350 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 CNTD2Q9H8S5 307 aa11.64□□□□□ -0.55
PTPN7-217ENST00000495688 TTLL8A6PVC2 850 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 MS4A18H0YCH9 400 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 ADAM10O14672 748 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 FADS1O60427 444 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 AQP8O94778 261 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 IGLV3-19P01714 112 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 LBX1P52954 281 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 OR1D5P58170 312 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 SLC26A5P58743 744 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 TAF13Q15543 124 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 MS4A18Q3C1V0 323 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 RNF144BQ7Z419 303 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 GRINAQ7Z429 371 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 NUDCD2Q8WVJ2 157 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 OIT3Q8WWZ8 545 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 FGGYQ96C11 551 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 DPYSL5Q9BPU6 564 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 EMC6Q9BV81 110 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 PTGES2Q9H7Z7 377 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 C12orf4Q9NQ89 552 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 UPB1Q9UBR1 384 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 PLEKHA6Q9Y2H5 1048 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 A0A1W2PQD3 144 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 C2CD4DB7Z1M9 353 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 D6RAR5 112 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 FTCDNL1E5RQL4 147 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 APOC3P02656 99 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 MELTFP08582 738 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 FOLR1P15328 257 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 FSTP19883 344 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 CXADRP78310 365 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms