RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 CCDC182A6NF36 153 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 H0YAE9 185 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 SYNGR3O43761 229 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 CCL2P13500 99 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 NR4A1P22736 598 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 PCSK6P29122 969 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 HTR1FP30939 366 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 RAD52P43351 418 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 NUDT6P53370 316 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 POU4F2Q12837 409 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 IL18R1Q13478 541 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 EIF2B1Q14232 305 aaKnown RBP14.8□□□□□ -0.04
HDAC6-235ENST00000495515 GGTLC2Q14390 218 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 OCLNQ16625 522 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 ZNF544Q6NX49 715 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 TMEM154Q6P9G4 183 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 CFAP77Q6ZQR2 320 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 SLC16A9Q7RTY1 509 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 DPY19L4Q7Z388 723 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 DCXRQ7Z4W1 244 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 BCDIN3DQ7Z5W3 292 aaKnown RBP14.8□□□□□ -0.04
HDAC6-235ENST00000495515 C1orf174Q8IYL3 243 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 NRG4Q8WWG1 115 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 ZNF582Q96NG8 517 aaPredicted RBP14.8□□□□□ -0.04
HDAC6-235ENST00000495515 CNN2Q99439 309 aaKnown RBP14.8□□□□□ -0.04
HDAC6-235ENST00000495515 ATF6BQ99941 703 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 DHRS9Q9BPW9 319 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 BCL2L14Q9BZR8 327 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 YIPF3Q9GZM5 350 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 ELOVL3Q9HB03 270 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 CLN6Q9NWW5 311 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 DNAJC27Q9NZQ0 273 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 TMEM14AQ9Y6G1 99 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 PRR14LQ5THK1 2151 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 ABCA4P78363 2273 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 NOTCH2Q04721 2471 aa14.8□□□□□ -0.04
HDAC6-235ENST00000495515 LOC100509620A0A075B734 347 aa14.79□□□□□ -0.04
HDAC6-235ENST00000495515 E7EQL1 145 aa14.79□□□□□ -0.04
HDAC6-235ENST00000495515 SELENOFO60613 162 aa14.79□□□□□ -0.04
HDAC6-235ENST00000495515 ATP6V1E1P36543 226 aa14.79□□□□□ -0.04
HDAC6-235ENST00000495515 CAPGP40121 348 aa14.79□□□□□ -0.04
HDAC6-235ENST00000495515 NAA10P41227 235 aaPredicted RBP14.79□□□□□ -0.04
HDAC6-235ENST00000495515 RPS27P42677 84 aaKnown RBP14.79□□□□□ -0.04
HDAC6-235ENST00000495515 SLC15A1P46059 708 aa14.79□□□□□ -0.04
HDAC6-235ENST00000495515 FABP6P51161 128 aa14.79□□□□□ -0.04
HDAC6-235ENST00000495515 KRTAP10-9P60411 292 aa14.79□□□□□ -0.04
HDAC6-235ENST00000495515 HGFACQ04756 655 aa14.79□□□□□ -0.04
HDAC6-235ENST00000495515 SNTB2Q13425 540 aaKnown RBP14.79□□□□□ -0.04
HDAC6-235ENST00000495515 TAF13Q15543 124 aa14.79□□□□□ -0.04
HDAC6-235ENST00000495515 KRT80Q6KB66 452 aa14.79□□□□□ -0.04
HDAC6-235ENST00000495515 B3GLCTQ6Y288 498 aa14.79□□□□□ -0.04
HDAC6-235ENST00000495515 ENTHD1Q8IYW4 607 aa14.79□□□□□ -0.04
HDAC6-235ENST00000495515 LILRB1Q8NHL6 650 aaPredicted RBP14.79□□□□□ -0.04
HDAC6-235ENST00000495515 RHOXF1Q8NHV9 184 aa14.79□□□□□ -0.04
HDAC6-235ENST00000495515 OTOSQ8NHW6 89 aa14.79□□□□□ -0.04
HDAC6-235ENST00000495515 NEUROG1Q92886 237 aa14.79□□□□□ -0.04
HDAC6-235ENST00000495515 UBE2FQ969M7 185 aa14.79□□□□□ -0.04
HDAC6-235ENST00000495515 SPTSSAQ969W0 71 aa14.79□□□□□ -0.04
HDAC6-235ENST00000495515 MAP6Q96JE9 813 aa14.79□□□□□ -0.04
HDAC6-235ENST00000495515 LURAP1Q96LR2 239 aa14.79□□□□□ -0.04
HDAC6-235ENST00000495515 MNTQ99583 582 aa14.79□□□□□ -0.04
HDAC6-235ENST00000495515 ZNF442Q9H7R0 627 aa14.79□□□□□ -0.04
HDAC6-235ENST00000495515 CA10Q9NS85 328 aa14.79□□□□□ -0.04
HDAC6-235ENST00000495515 LAMP5Q9UJQ1 280 aa14.79□□□□□ -0.04
HDAC6-235ENST00000495515 ZNF878C9JN71 531 aa14.78□□□□□ -0.04
HDAC6-235ENST00000495515 ABHD16AO95870 558 aa14.78□□□□□ -0.04
HDAC6-235ENST00000495515 LYNP07948 512 aa14.78□□□□□ -0.04
HDAC6-235ENST00000495515 APOBEC3AP31941 199 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-235ENST00000495515 GLRXP35754 106 aa14.78□□□□□ -0.04
HDAC6-235ENST00000495515 RGS6P49758 472 aa14.78□□□□□ -0.04
HDAC6-235ENST00000495515 UCP2P55851 309 aa14.78□□□□□ -0.04
HDAC6-235ENST00000495515 NKX6-1P78426 367 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-235ENST00000495515 ADARB1P78563 741 aaKnown RBP14.78□□□□□ -0.04
HDAC6-235ENST00000495515 IL5RAQ01344 420 aa14.78□□□□□ -0.04
HDAC6-235ENST00000495515 ZNF691Q5VV52 312 aa14.78□□□□□ -0.04
HDAC6-235ENST00000495515 RHOUQ7L0Q8 258 aa14.78□□□□□ -0.04
HDAC6-235ENST00000495515 FBXL14Q8N1E6 418 aa14.78□□□□□ -0.04
HDAC6-235ENST00000495515 SMAP2Q8WU79 429 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-235ENST00000495515 SLAMF6Q96DU3 332 aa14.78□□□□□ -0.04
HDAC6-235ENST00000495515 C4orf45Q96LM5 186 aa14.78□□□□□ -0.04
HDAC6-235ENST00000495515 COG8Q96MW5 612 aa14.78□□□□□ -0.04
HDAC6-235ENST00000495515 COPS4Q9BT78 406 aa14.78□□□□□ -0.04
HDAC6-235ENST00000495515 CENPMQ9NSP4 180 aa14.78□□□□□ -0.04
HDAC6-235ENST00000495515 DDX28Q9NUL7 540 aaKnown RBP14.78□□□□□ -0.04
HDAC6-235ENST00000495515 HSPE1-MOB4S4R3N1 261 aa14.78□□□□□ -0.04
HDAC6-235ENST00000495515 CENPEQ02224 2701 aa14.78□□□□□ -0.04
HDAC6-235ENST00000495515 J3QW42 95 aa14.77□□□□□ -0.05
HDAC6-235ENST00000495515 PHYHO14832 338 aa14.77□□□□□ -0.05
HDAC6-235ENST00000495515 ICMTO60725 284 aa14.77□□□□□ -0.05
HDAC6-235ENST00000495515 ENTPD6O75354 484 aa14.77□□□□□ -0.05
HDAC6-235ENST00000495515 MRPL3P09001 348 aaKnown RBP14.77□□□□□ -0.05
HDAC6-235ENST00000495515 HSPA13P48723 471 aa14.77□□□□□ -0.05
HDAC6-235ENST00000495515 TPTEP56180 551 aa14.77□□□□□ -0.05
HDAC6-235ENST00000495515 GRB2P62993 217 aaKnown RBP14.77□□□□□ -0.05
HDAC6-235ENST00000495515 AGAP6Q5VW22 663 aa14.77□□□□□ -0.05
HDAC6-235ENST00000495515 VHLLQ6RSH7 139 aa14.77□□□□□ -0.05
HDAC6-235ENST00000495515 PAMR1Q6UXH9 720 aa14.77□□□□□ -0.05
HDAC6-235ENST00000495515 LURAP1LQ8IV03 231 aa14.77□□□□□ -0.05
HDAC6-235ENST00000495515 PAQR4Q8N4S7 273 aaPredicted RBP14.77□□□□□ -0.05
HDAC6-235ENST00000495515 OR51G2Q8NGK0 314 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms