RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 HAVCR1Q96D42 359 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 C7orf26Q96N11 449 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 NUDT16L1Q9BRJ7 211 aaKnown RBP11.93□□□□□ -0.5
VARS-228ENST00000495010 POLR2J2Q9GZM3 115 aaKnown RBP11.93□□□□□ -0.5
VARS-228ENST00000495010 POLR2J3Q9H1A7 115 aaKnown RBP11.93□□□□□ -0.5
VARS-228ENST00000495010 POFUT1Q9H488 388 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 MARCH7Q9H992 704 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 TMEM165Q9HC07 324 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 NOX4Q9NPH5 578 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 ARMCX1Q9P291 453 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 RIMS3Q9UJD0 308 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 STARD10Q9Y365 291 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 KIR2DS1A0A191URI9 304 aa11.92□□□□□ -0.5
VARS-228ENST00000495010 CLPSL1A2RUU4 121 aa11.92□□□□□ -0.5
VARS-228ENST00000495010 A6NIZ1 184 aa11.92□□□□□ -0.5
VARS-228ENST00000495010 SGCEO43556 437 aa11.92□□□□□ -0.5
VARS-228ENST00000495010 NDUFA7O95182 113 aa11.92□□□□□ -0.5
VARS-228ENST00000495010 CYB5R3P00387 301 aaPredicted RBP11.92□□□□□ -0.5
VARS-228ENST00000495010 TSPAN19P0C672 248 aa11.92□□□□□ -0.5
VARS-228ENST00000495010 RAP1BP61224 184 aa11.92□□□□□ -0.5
VARS-228ENST00000495010 RAP1AP62834 184 aa11.92□□□□□ -0.5
VARS-228ENST00000495010 PAX2Q02962 417 aa11.92□□□□□ -0.5
VARS-228ENST00000495010 NFYCQ13952 458 aa11.92□□□□□ -0.5
VARS-228ENST00000495010 ENDOGQ14249 297 aaKnown RBP11.92□□□□□ -0.5
VARS-228ENST00000495010 PDCD1Q15116 288 aa11.92□□□□□ -0.5
VARS-228ENST00000495010 FOXL2NBQ6ZUU3 175 aa11.92□□□□□ -0.5
VARS-228ENST00000495010 C1orf87Q8N0U7 546 aa11.92□□□□□ -0.5
VARS-228ENST00000495010 OR10A6Q8NH74 314 aa11.92□□□□□ -0.5
VARS-228ENST00000495010 FAM71F1Q96KD3 344 aaPredicted RBP11.92□□□□□ -0.5
VARS-228ENST00000495010 CITED1Q99966 193 aa11.92□□□□□ -0.5
VARS-228ENST00000495010 KAT8Q9H7Z6 458 aaKnown RBP11.92□□□□□ -0.5
VARS-228ENST00000495010 POLE4Q9NR33 117 aa11.92□□□□□ -0.5
VARS-228ENST00000495010 C1RLQ9NZP8 487 aa11.92□□□□□ -0.5
VARS-228ENST00000495010 CLN8Q9UBY8 286 aa11.92□□□□□ -0.5
VARS-228ENST00000495010 BAG5Q9UL15 447 aa11.92□□□□□ -0.5
VARS-228ENST00000495010 HIF3AQ9Y2N7 669 aa11.92□□□□□ -0.5
VARS-228ENST00000495010 SHOX2O60902 331 aaPredicted RBP11.91□□□□□ -0.5
VARS-228ENST00000495010 IFI30P13284 250 aa11.91□□□□□ -0.5
VARS-228ENST00000495010 IRF2P14316 349 aa11.91□□□□□ -0.5
VARS-228ENST00000495010 RAC2P15153 192 aa11.91□□□□□ -0.5
VARS-228ENST00000495010 IFNA8P32881 189 aa11.91□□□□□ -0.5
VARS-228ENST00000495010 PITPNBP48739 271 aa11.91□□□□□ -0.5
VARS-228ENST00000495010 PIN1Q13526 163 aaPredicted RBP11.91□□□□□ -0.5
VARS-228ENST00000495010 VMACQ2NL98 169 aa11.91□□□□□ -0.5
VARS-228ENST00000495010 Q6YL49 198 aa11.91□□□□□ -0.5
VARS-228ENST00000495010 IGFN1Q86VF2 1251 aa11.91□□□□□ -0.5
VARS-228ENST00000495010 TMEM86BQ8N661 226 aa11.91□□□□□ -0.5
VARS-228ENST00000495010 OR10AD1Q8NGE0 317 aa11.91□□□□□ -0.5
VARS-228ENST00000495010 OR5L1Q8NGL2 311 aa11.91□□□□□ -0.5
VARS-228ENST00000495010 OR13G1Q8NGZ3 307 aa11.91□□□□□ -0.5
VARS-228ENST00000495010 LRRC8CQ8TDW0 803 aa11.91□□□□□ -0.5
VARS-228ENST00000495010 MEGF10Q96KG7 1140 aa11.91□□□□□ -0.5
VARS-228ENST00000495010 ZNF582Q96NG8 517 aaPredicted RBP11.91□□□□□ -0.5
VARS-228ENST00000495010 TMEM246Q9BRR3 403 aa11.91□□□□□ -0.5
VARS-228ENST00000495010 CHIAQ9BZP6 476 aa11.91□□□□□ -0.5
VARS-228ENST00000495010 PRDM13Q9H4Q3 707 aa11.91□□□□□ -0.5
VARS-228ENST00000495010 EMC7Q9NPA0 242 aa11.91□□□□□ -0.5
VARS-228ENST00000495010 PIP5K1CO60331 668 aa11.9□□□□□ -0.5
VARS-228ENST00000495010 THRBP10828 461 aa11.9□□□□□ -0.5
VARS-228ENST00000495010 TNFRSF1BP20333 461 aa11.9□□□□□ -0.5
VARS-228ENST00000495010 FGF12P61328 243 aa11.9□□□□□ -0.5
VARS-228ENST00000495010 ZNF404Q494X3 552 aa11.9□□□□□ -0.5
VARS-228ENST00000495010 ZNF620Q6ZNG0 422 aa11.9□□□□□ -0.5
VARS-228ENST00000495010 CCDC80Q76M96 950 aa11.9□□□□□ -0.5
VARS-228ENST00000495010 VASH1Q7L8A9 365 aaPredicted RBP11.9□□□□□ -0.5
VARS-228ENST00000495010 MOGAT3Q86VF5 341 aa11.9□□□□□ -0.5
VARS-228ENST00000495010 DPP10Q8N608 796 aa11.9□□□□□ -0.5
VARS-228ENST00000495010 OR8G5Q8NG78 346 aa11.9□□□□□ -0.5
VARS-228ENST00000495010 TBC1D15Q8TC07 691 aa11.9□□□□□ -0.5
VARS-228ENST00000495010 BPIFA2Q96DR5 249 aa11.9□□□□□ -0.5
VARS-228ENST00000495010 RBM4BQ9BQ04 359 aaKnown RBP11.9□□□□□ -0.5
VARS-228ENST00000495010 PCGF1Q9BSM1 259 aa11.9□□□□□ -0.5
VARS-228ENST00000495010 PTTG3PQ9NZH4 202 aa11.9□□□□□ -0.5
VARS-228ENST00000495010 RNF114Q9Y508 228 aa11.9□□□□□ -0.5
VARS-228ENST00000495010 IGHV3-64DA0A0J9YX35 117 aa11.89□□□□□ -0.51
VARS-228ENST00000495010 HTR3EA5X5Y0 456 aa11.89□□□□□ -0.51
VARS-228ENST00000495010 H7C1C5 153 aa11.89□□□□□ -0.51
VARS-228ENST00000495010 ENSAO43768 121 aaKnown RBP11.89□□□□□ -0.51
VARS-228ENST00000495010 IFNA14P01570 189 aa11.89□□□□□ -0.51
VARS-228ENST00000495010 SCG5P05408 212 aa11.89□□□□□ -0.51
VARS-228ENST00000495010 RGS6P49758 472 aa11.89□□□□□ -0.51
VARS-228ENST00000495010 ERFP50548 548 aa11.89□□□□□ -0.51
VARS-228ENST00000495010 LCN6P62502 163 aa11.89□□□□□ -0.51
VARS-228ENST00000495010 ST3GAL3Q11203 375 aa11.89□□□□□ -0.51
VARS-228ENST00000495010 HLXQ14774 488 aaPredicted RBP11.89□□□□□ -0.51
VARS-228ENST00000495010 TAF9Q16594 264 aa11.89□□□□□ -0.51
VARS-228ENST00000495010 OR2T2Q6IF00 324 aa11.89□□□□□ -0.51
VARS-228ENST00000495010 FITM2Q8N6M3 262 aa11.89□□□□□ -0.51
VARS-228ENST00000495010 OR51A7Q8NH64 312 aa11.89□□□□□ -0.51
VARS-228ENST00000495010 RASD2Q96D21 266 aa11.89□□□□□ -0.51
VARS-228ENST00000495010 GRHPRQ9UBQ7 328 aa11.89□□□□□ -0.51
VARS-228ENST00000495010 POMT1Q9Y6A1 747 aa11.89□□□□□ -0.51
VARS-228ENST00000495010 TRAV27A0A087WT01 109 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 J3QW42 95 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 XKRYO14609 159 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 PHYHO14832 338 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 MELTFP08582 738 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 SELEP16581 610 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 RPL4P36578 427 aaKnown RBP11.88□□□□□ -0.51
VARS-228ENST00000495010 OR1E2P47887 323 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms