RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 ZNF26P17031 533 aaPredicted RBP18.59■□□□□ 0.57
HDDC3-203ENST00000494993 SLC6A9P48067 706 aa18.59■□□□□ 0.57
HDDC3-203ENST00000494993 SEC61A1P61619 476 aaKnown RBP18.59■□□□□ 0.57
HDDC3-203ENST00000494993 ZNF154Q13106 437 aa18.59■□□□□ 0.57
HDDC3-203ENST00000494993 AQP6Q13520 282 aa18.59■□□□□ 0.57
HDDC3-203ENST00000494993 ZMYND11Q15326 602 aa18.59■□□□□ 0.57
HDDC3-203ENST00000494993 ZBED5Q49AG3 693 aa18.59■□□□□ 0.57
HDDC3-203ENST00000494993 IFI44LQ53G44 452 aa18.59■□□□□ 0.57
HDDC3-203ENST00000494993 RBMS3Q6XE24 437 aaKnown RBP18.59■□□□□ 0.57
HDDC3-203ENST00000494993 TMPRSS11FQ6ZWK6 438 aa18.59■□□□□ 0.57
HDDC3-203ENST00000494993 ARPINQ7Z6K5 226 aa18.59■□□□□ 0.57
HDDC3-203ENST00000494993 SIGLECL1Q8N7X8 197 aa18.59■□□□□ 0.57
HDDC3-203ENST00000494993 HAVCR1Q96D42 359 aa18.59■□□□□ 0.57
HDDC3-203ENST00000494993 COG8Q96MW5 612 aa18.59■□□□□ 0.57
HDDC3-203ENST00000494993 PLEK2Q9NYT0 353 aa18.59■□□□□ 0.57
HDDC3-203ENST00000494993 NUP50Q9UKX7 468 aa18.59■□□□□ 0.57
HDDC3-203ENST00000494993 PPP1R3CQ9UQK1 317 aa18.59■□□□□ 0.57
HDDC3-203ENST00000494993 AUP1Q9Y679 476 aa18.59■□□□□ 0.57
HDDC3-203ENST00000494993 A8MXK9 166 aa18.58■□□□□ 0.56
HDDC3-203ENST00000494993 SURF4O15260 269 aa18.58■□□□□ 0.56
HDDC3-203ENST00000494993 KLF17Q5JT82 389 aaPredicted RBP18.58■□□□□ 0.56
HDDC3-203ENST00000494993 CBLL1Q75N03 491 aa18.58■□□□□ 0.56
HDDC3-203ENST00000494993 DOK3Q7L591 496 aa18.58■□□□□ 0.56
HDDC3-203ENST00000494993 SLC15A3Q8IY34 581 aa18.58■□□□□ 0.56
HDDC3-203ENST00000494993 POU5F2Q8N7G0 328 aa18.58■□□□□ 0.56
HDDC3-203ENST00000494993 SLC7A6Q92536 515 aa18.58■□□□□ 0.56
HDDC3-203ENST00000494993 NDEL1Q9GZM8 345 aa18.58■□□□□ 0.56
HDDC3-203ENST00000494993 ARGLU1Q9NWB6 273 aaPredicted RBP18.58■□□□□ 0.56
HDDC3-203ENST00000494993 ZNF69Q9UC07 566 aa18.58■□□□□ 0.56
HDDC3-203ENST00000494993 INSIG2Q9Y5U4 225 aa18.58■□□□□ 0.56
HDDC3-203ENST00000494993 CXCR6O00574 342 aa18.57■□□□□ 0.56
HDDC3-203ENST00000494993 HKR1P10072 659 aa18.57■□□□□ 0.56
HDDC3-203ENST00000494993 ERFP50548 548 aa18.57■□□□□ 0.56
HDDC3-203ENST00000494993 GUCY1A3Q02108 690 aa18.57■□□□□ 0.56
HDDC3-203ENST00000494993 LIPEQ05469 1076 aa18.57■□□□□ 0.56
HDDC3-203ENST00000494993 FOXL1Q12952 345 aa18.57■□□□□ 0.56
HDDC3-203ENST00000494993 KRR1Q13601 381 aaKnown RBP18.57■□□□□ 0.56
HDDC3-203ENST00000494993 C1orf94Q6P1W5 598 aa18.57■□□□□ 0.56
HDDC3-203ENST00000494993 RRM2BQ7LG56 351 aa18.57■□□□□ 0.56
HDDC3-203ENST00000494993 PTP4A1Q93096 173 aa18.57■□□□□ 0.56
HDDC3-203ENST00000494993 RASD2Q96D21 266 aa18.57■□□□□ 0.56
HDDC3-203ENST00000494993 HSH2DQ96JZ2 352 aa18.57■□□□□ 0.56
HDDC3-203ENST00000494993 OR2V2Q96R30 315 aa18.57■□□□□ 0.56
HDDC3-203ENST00000494993 GPA33Q99795 319 aa18.57■□□□□ 0.56
HDDC3-203ENST00000494993 MRI1Q9BV20 369 aa18.57■□□□□ 0.56
HDDC3-203ENST00000494993 ASH2LQ9UBL3 628 aa18.57■□□□□ 0.56
HDDC3-203ENST00000494993 TMEM5Q9Y2B1 443 aa18.57■□□□□ 0.56
HDDC3-203ENST00000494993 PCDHGB1Q9Y5G3 927 aa18.57■□□□□ 0.56
HDDC3-203ENST00000494993 PKD1L1Q8TDX9 2849 aa18.56■□□□□ 0.56
HDDC3-203ENST00000494993 OR6C6A6NF89 314 aa18.56■□□□□ 0.56
HDDC3-203ENST00000494993 SLC22A2O15244 555 aa18.56■□□□□ 0.56
HDDC3-203ENST00000494993 SLC16A7O60669 478 aa18.56■□□□□ 0.56
HDDC3-203ENST00000494993 RAC2P15153 192 aa18.56■□□□□ 0.56
HDDC3-203ENST00000494993 H2AFXP16104 143 aaPredicted RBP18.56■□□□□ 0.56
HDDC3-203ENST00000494993 PRTN3P24158 256 aa18.56■□□□□ 0.56
HDDC3-203ENST00000494993 MDH2P40926 338 aaKnown RBP18.56■□□□□ 0.56
HDDC3-203ENST00000494993 LSM6P62312 80 aaKnown RBP18.56■□□□□ 0.56
HDDC3-203ENST00000494993 ESCO2Q56NI9 601 aa18.56■□□□□ 0.56
HDDC3-203ENST00000494993 OTPQ5XKR4 325 aa18.56■□□□□ 0.56
HDDC3-203ENST00000494993 FKBP9P1Q75LS8 142 aa18.56■□□□□ 0.56
HDDC3-203ENST00000494993 MUC20Q8N307 709 aaPredicted RBP18.56■□□□□ 0.56
HDDC3-203ENST00000494993 OR1F12Q8NHA8 337 aa18.56■□□□□ 0.56
HDDC3-203ENST00000494993 ZNF747Q9BV97 191 aa18.56■□□□□ 0.56
HDDC3-203ENST00000494993 SYT4Q9H2B2 425 aa18.56■□□□□ 0.56
HDDC3-203ENST00000494993 ANKRD19PQ9H560 264 aa18.56■□□□□ 0.56
HDDC3-203ENST00000494993 ARMCX1Q9P291 453 aa18.56■□□□□ 0.56
HDDC3-203ENST00000494993 DNAJC9-AS1A6NH13 148 aa18.55■□□□□ 0.56
HDDC3-203ENST00000494993 TMEM178BH3BS89 294 aa18.55■□□□□ 0.56
HDDC3-203ENST00000494993 J3QW42 95 aa18.55■□□□□ 0.56
HDDC3-203ENST00000494993 GSTA4O15217 222 aa18.55■□□□□ 0.56
HDDC3-203ENST00000494993 KHDRBS3O75525 346 aaKnown RBP18.55■□□□□ 0.56
HDDC3-203ENST00000494993 SASH3O75995 380 aa18.55■□□□□ 0.56
HDDC3-203ENST00000494993 NDUFB2O95178 105 aa18.55■□□□□ 0.56
HDDC3-203ENST00000494993 SDHAP31040 664 aa18.55■□□□□ 0.56
HDDC3-203ENST00000494993 RGS6P49758 472 aa18.55■□□□□ 0.56
HDDC3-203ENST00000494993 MMP16P51512 607 aa18.55■□□□□ 0.56
HDDC3-203ENST00000494993 CCDC92Q53HC0 331 aaPredicted RBP18.55■□□□□ 0.56
HDDC3-203ENST00000494993 GLB1L2Q8IW92 636 aa18.55■□□□□ 0.56
HDDC3-203ENST00000494993 OR5AS1Q8N127 324 aa18.55■□□□□ 0.56
HDDC3-203ENST00000494993 BCL6BQ8N143 479 aaPredicted RBP18.55■□□□□ 0.56
HDDC3-203ENST00000494993 RP9Q8TA86 221 aaKnown RBP18.55■□□□□ 0.56
HDDC3-203ENST00000494993 SLC7A13Q8TCU3 470 aa18.55■□□□□ 0.56
HDDC3-203ENST00000494993 FAM46AQ96IP4 442 aaKnown RBP18.55■□□□□ 0.56
HDDC3-203ENST00000494993 RERGLQ9H628 205 aa18.55■□□□□ 0.56
HDDC3-203ENST00000494993 ZMAT3Q9HA38 289 aaKnown RBP18.55■□□□□ 0.56
HDDC3-203ENST00000494993 NMNAT1Q9HAN9 279 aaPredicted RBP18.55■□□□□ 0.56
HDDC3-203ENST00000494993 GCM1Q9NP62 436 aa18.55■□□□□ 0.56
HDDC3-203ENST00000494993 VSX1Q9NZR4 365 aaPredicted RBP18.55■□□□□ 0.56
HDDC3-203ENST00000494993 OR5V1Q9UGF6 321 aa18.55■□□□□ 0.56
HDDC3-203ENST00000494993 ATPIF1Q9UII2 106 aa18.55■□□□□ 0.56
HDDC3-203ENST00000494993 SIGLEC7Q9Y286 467 aa18.55■□□□□ 0.56
HDDC3-203ENST00000494993 COA3Q9Y2R0 106 aaPredicted RBP18.55■□□□□ 0.56
HDDC3-203ENST00000494993 CEACAM18A8MTB9 384 aa18.54■□□□□ 0.56
HDDC3-203ENST00000494993 IFNL4K9M1U5 179 aa18.54■□□□□ 0.56
HDDC3-203ENST00000494993 NME4O00746 187 aa18.54■□□□□ 0.56
HDDC3-203ENST00000494993 SERPINA1P01009 418 aa18.54■□□□□ 0.56
HDDC3-203ENST00000494993 GPR139Q6DWJ6 353 aa18.54■□□□□ 0.56
HDDC3-203ENST00000494993 FBXW12Q6X9E4 464 aa18.54■□□□□ 0.56
HDDC3-203ENST00000494993 TSEN54Q7Z6J9 526 aaKnown RBP18.54■□□□□ 0.56
HDDC3-203ENST00000494993 CYP4Z1Q86W10 505 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms