RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 SEPT4O43236 478 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 SCGNO76038 276 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 ZFPL1O95159 310 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 AMBPP02760 352 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 KLK1P06870 262 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 GALTP07902 379 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 CXCL1P09341 107 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 TMEM225BP0DP42 221 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 MAKP20794 623 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 RPS26P62854 115 aaKnown RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 TGIF1Q15583 401 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 VAX1Q5SQQ9 334 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 ZNF774Q6NX45 483 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 SLC39A5Q6ZMH5 540 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 OR51A2Q8NGJ7 313 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 C2orf15Q8WU43 125 aaKnown RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 C22orf15Q8WYQ4 148 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 ARSGQ96EG1 525 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 CPNE2Q96FN4 548 aaPredicted RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 SLC6A7Q99884 636 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 RAB33BQ9H082 229 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 OR2AG1Q9H205 316 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 DPEP2Q9H4A9 486 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 AURKAIP1Q9NWT8 199 aaPredicted RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 MYOTQ9UBF9 498 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 YIPF1Q9Y548 306 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 HS3ST3B1Q9Y662 390 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 A0A0A6YYD5 115 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 A0A0U1RQV5 110 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 A6NCN8 305 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 TMEM212A6NML5 194 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 SFT2D2O95562 160 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 KNG1P01042 644 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 RHOCP08134 193 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 NPSP0C0P6 89 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 TRGC1P0CF51 173 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 NR2C1P13056 603 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 IGFBP3P17936 291 aaPredicted RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 PBLDP30039 288 aaPredicted RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 RPS10P46783 165 aaKnown RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 IDH3GP51553 393 aaPredicted RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 NANOS3P60323 173 aaKnown RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 SELENOTP62341 195 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 MEF2AQ02078 507 aaPredicted RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 TLE4Q04727 773 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 DUSP8Q13202 625 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 SCGB2B2Q4G0G5 96 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 TP53I3Q53FA7 332 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 PRRT3Q5FWE3 981 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 BEX5Q5H9J7 111 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 KHDRBS2Q5VWX1 349 aaKnown RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 LINC00114Q6XXX2 140 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 TMPPEQ6ZT21 453 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 RFLNBQ8N5W9 214 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 EXD3Q8N9H8 876 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 DCAF4L2Q8NA75 395 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 OR2A12Q8NGT7 310 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 FAM122AQ96E09 287 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 ATG10Q9H0Y0 220 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 PRO1933Q9H354 126 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 GLIPR2Q9H4G4 154 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 MED20Q9H944 212 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 MSL2Q9HCI7 577 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 LUZP4Q9P127 313 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 MRPS33Q9Y291 106 aaKnown RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 ZNF443Q9Y2A4 671 aaPredicted RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 ZFP30Q9Y2G7 519 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 PRG3Q9Y2Y8 225 aaPredicted RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 MMP24Q9Y5R2 645 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 ZFP37Q9Y6Q3 630 aaPredicted RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 ZNF736B4DX44 427 aaPredicted RBP4.31□□□□□ -1.72
PRKD3-210ENST00000494667 M0QZ92 97 aa4.31□□□□□ -1.72
PRKD3-210ENST00000494667 CIDEAO60543 219 aa4.31□□□□□ -1.72
PRKD3-210ENST00000494667 TSPAN15O95858 294 aa4.31□□□□□ -1.72
PRKD3-210ENST00000494667 HSPB1P04792 205 aaKnown RBP4.31□□□□□ -1.72
PRKD3-210ENST00000494667 TACSTD2P09758 323 aa4.31□□□□□ -1.72
PRKD3-210ENST00000494667 PNLIPP16233 465 aa4.31□□□□□ -1.72
PRKD3-210ENST00000494667 SLC6A6P31641 620 aa4.31□□□□□ -1.72
PRKD3-210ENST00000494667 APOBEC3AP31941 199 aaPredicted RBP4.31□□□□□ -1.72
PRKD3-210ENST00000494667 SERPINF1P36955 418 aa4.31□□□□□ -1.72
PRKD3-210ENST00000494667 PNRC1Q12796 327 aaPredicted RBP4.31□□□□□ -1.72
PRKD3-210ENST00000494667 EFEMP1Q12805 493 aa4.31□□□□□ -1.72
PRKD3-210ENST00000494667 DUSP5Q16690 384 aa4.31□□□□□ -1.72
PRKD3-210ENST00000494667 TMEM128Q5BJH2 165 aa4.31□□□□□ -1.72
PRKD3-210ENST00000494667 C1orf100Q5SVJ3 147 aa4.31□□□□□ -1.72
PRKD3-210ENST00000494667 TMCO2Q7Z6W1 182 aaPredicted RBP4.31□□□□□ -1.72
PRKD3-210ENST00000494667 PPP1R3BQ86XI6 285 aa4.31□□□□□ -1.72
PRKD3-210ENST00000494667 MAML2Q8IZL2 1156 aaPredicted RBP4.31□□□□□ -1.72
PRKD3-210ENST00000494667 TMEM104Q8NE00 496 aa4.31□□□□□ -1.72
PRKD3-210ENST00000494667 KLHDC9Q8NEP7 349 aa4.31□□□□□ -1.72
PRKD3-210ENST00000494667 OR51F2Q8NH61 342 aa4.31□□□□□ -1.72
PRKD3-210ENST00000494667 FIBINQ8TAL6 211 aa4.31□□□□□ -1.72
PRKD3-210ENST00000494667 MCHR1Q99705 422 aa4.31□□□□□ -1.72
PRKD3-210ENST00000494667 COMMD4Q9H0A8 199 aa4.31□□□□□ -1.72
PRKD3-210ENST00000494667 KCNJ16Q9NPI9 418 aa4.31□□□□□ -1.72
PRKD3-210ENST00000494667 APOBEC3BQ9UH17 382 aaKnown RBP4.31□□□□□ -1.72
PRKD3-210ENST00000494667 CPA4Q9UI42 421 aa4.31□□□□□ -1.72
PRKD3-210ENST00000494667 DYRK1BQ9Y463 629 aa4.31□□□□□ -1.72
PRKD3-210ENST00000494667 TICRRQ7Z2Z1 1910 aa4.31□□□□□ -1.72
PRKD3-210ENST00000494667 NINQ8N4C6 2090 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms