RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 GPR35Q9HC97 309 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 GLRX2Q9NS18 164 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 SNTG1Q9NSN8 517 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 TMEM38BQ9NVV0 291 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 PARPBPQ9NWS1 579 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 CLCF1Q9UBD9 225 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 NUFIP1Q9UHK0 495 aaKnown RBP5.98□□□□□ -1.45
MSH5-217ENST00000494458 V9GYH0 126 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 DCHS1Q96JQ0 3298 aa5.98□□□□□ -1.45
MSH5-217ENST00000494458 TNRC6AQ8NDV7 1962 aaKnown RBP5.98□□□□□ -1.45
MSH5-217ENST00000494458 A0A1B0GTI1 187 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 TMEM269A0A1B0GVZ9 245 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 LOC390937A0A1W2PQ73 354 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 OR14I1A6ND48 311 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 ZNF878C9JN71 531 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 DLL1O00548 723 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 KLK10O43240 276 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 SYNGR3O43761 229 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 WISP2O76076 250 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 TPPPO94811 219 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 ALX3O95076 343 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 PDGFAP04085 211 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 YES1P07947 543 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 MMP7P09237 267 aaPredicted RBP5.97□□□□□ -1.45
MSH5-217ENST00000494458 ADRA2CP18825 462 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 FSTP19883 344 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 ACHEP22303 614 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 CRYGSP22914 178 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 MAPK3P27361 379 aaPredicted RBP5.97□□□□□ -1.45
MSH5-217ENST00000494458 CALRP27797 417 aaKnown RBP5.97□□□□□ -1.45
MSH5-217ENST00000494458 CDAP32320 146 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 EVX1P49640 407 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 PSMD7P51665 324 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 SCAND1P57086 179 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 PSMA6P60900 246 aaKnown RBP5.97□□□□□ -1.45
MSH5-217ENST00000494458 MFGE8Q08431 387 aaPredicted RBP5.97□□□□□ -1.45
MSH5-217ENST00000494458 HNRNPA0Q13151 305 aaKnown RBP5.97□□□□□ -1.45
MSH5-217ENST00000494458 ZNF169Q14929 603 aaPredicted RBP5.97□□□□□ -1.45
MSH5-217ENST00000494458 TSPO2Q5TGU0 170 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 TMEM244Q5VVB8 128 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 OTPQ5XKR4 325 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 ZNF324BQ6AW86 544 aaPredicted RBP5.97□□□□□ -1.45
MSH5-217ENST00000494458 SFXN4Q6P4A7 337 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 STAC2Q6ZMT1 411 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 ZNF704Q6ZNC4 412 aaPredicted RBP5.97□□□□□ -1.45
MSH5-217ENST00000494458 BTLAQ7Z6A9 289 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 KRT77Q7Z794 578 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 SPACA3Q8IXA5 215 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 ZADH2Q8N4Q0 377 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 RBMXL3Q8N7X1 1067 aaKnown RBP5.97□□□□□ -1.45
MSH5-217ENST00000494458 OR10H5Q8NGA6 315 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 OR13C5Q8NGS8 318 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 OR6N1Q8NGY5 312 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 OR10AC1Q8NH08 325 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 FNDC9Q8TBE3 224 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 ABHD3Q8WU67 409 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 AP3S1Q92572 193 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 ITFG2Q969R8 447 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 FBXO17Q96EF6 278 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 FOXN4Q96NZ1 517 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 OR14A2Q96R54 314 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 KCNJ15Q99712 375 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 SLC30A2Q9BRI3 323 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 MRI1Q9BV20 369 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 TTTY10Q9BZA0 68 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 TPK1Q9H3S4 243 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 RERGLQ9H628 205 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 MOB1AQ9H8S9 216 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 SMURF1Q9HCE7 757 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 NOX4Q9NPH5 578 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 SLC17A5Q9NRA2 495 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 CYSLTR2Q9NS75 346 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 EMC3Q9P0I2 261 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 ABRACLQ9P1F3 81 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 ATPIF1Q9UII2 106 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 OR52A1Q9UKL2 312 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 IKZF2Q9UKS7 526 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 FBXL3Q9UKT7 428 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 MCTS1Q9ULC4 181 aaKnown RBP5.97□□□□□ -1.45
MSH5-217ENST00000494458 FOXJ3Q9UPW0 622 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 RHBDD3Q9Y3P4 386 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 NCOA6Q14686 2063 aaPredicted RBP5.97□□□□□ -1.45
MSH5-217ENST00000494458 ASPMQ8IZT6 3477 aa5.97□□□□□ -1.45
MSH5-217ENST00000494458 LOC400499M0QZD8 3231 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 A0A0U1RQV5 110 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 ISPDA4D126 451 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 OR6C6A6NF89 314 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 AHRRA9YTQ3 701 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 LOC110117498-PIK3R3F6TDL0 507 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 AIPO00170 330 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 CASKO14936 926 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 RER1O15258 196 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 SS18L1O75177 396 aaPredicted RBP5.96□□□□□ -1.46
MSH5-217ENST00000494458 RPP14O95059 124 aaKnown RBP5.96□□□□□ -1.46
MSH5-217ENST00000494458 SYNGR4O95473 234 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 CNOT4O95628 575 aaKnown RBP5.96□□□□□ -1.46
MSH5-217ENST00000494458 TGM6O95932 706 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 HLA-DQB1P01920 261 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 TTRP02766 147 aa5.96□□□□□ -1.46
MSH5-217ENST00000494458 H2BFMP0C1H6 154 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms