RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 SELENOVP59797 346 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 LSM6P62312 80 aaKnown RBP12.56□□□□□ -0.4
ATG4B-224ENST00000494132 ZNF718Q3SXZ3 478 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 ELFN2Q5R3F8 820 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 TMEM154Q6P9G4 183 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 AQP12AQ8IXF9 295 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 HS3ST5Q8IZT8 346 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 ZNF786Q8N393 782 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 LINC00471Q8N535 108 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 NPEPL1Q8NDH3 523 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 SLC26A10Q8NG04 563 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 OR9Q1Q8NGQ5 310 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 KLF14Q8TD94 323 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-224ENST00000494132 SNX33Q8WV41 574 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 ZNRF4Q8WWF5 429 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 YIPF5Q969M3 257 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 RACGAP1Q9H0H5 632 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 NARFLQ9H6Q4 476 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 HINT3Q9NQE9 182 aaKnown RBP12.56□□□□□ -0.4
ATG4B-224ENST00000494132 IL20Q9NYY1 176 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 POMPQ9Y244 141 aa12.56□□□□□ -0.4
ATG4B-224ENST00000494132 TVP23AA6NH52 213 aa12.55□□□□□ -0.4
ATG4B-224ENST00000494132 GSC2O15499 205 aa12.55□□□□□ -0.4
ATG4B-224ENST00000494132 GYPBP06028 91 aa12.55□□□□□ -0.4
ATG4B-224ENST00000494132 IGHV4-31P0DP07 118 aa12.55□□□□□ -0.4
ATG4B-224ENST00000494132 IL2RGP31785 369 aa12.55□□□□□ -0.4
ATG4B-224ENST00000494132 RPS27P42677 84 aaKnown RBP12.55□□□□□ -0.4
ATG4B-224ENST00000494132 CCL8P80075 99 aa12.55□□□□□ -0.4
ATG4B-224ENST00000494132 TEKQ02763 1124 aa12.55□□□□□ -0.4
ATG4B-224ENST00000494132 BNIP1Q12981 228 aa12.55□□□□□ -0.4
ATG4B-224ENST00000494132 HNRNPA0Q13151 305 aaKnown RBP12.55□□□□□ -0.4
ATG4B-224ENST00000494132 TSTQ16762 297 aaKnown RBP12.55□□□□□ -0.4
ATG4B-224ENST00000494132 RPL13AP3Q6NVV1 102 aa12.55□□□□□ -0.4
ATG4B-224ENST00000494132 IQCF1Q8N6M8 205 aa12.55□□□□□ -0.4
ATG4B-224ENST00000494132 OR1F12Q8NHA8 337 aa12.55□□□□□ -0.4
ATG4B-224ENST00000494132 GIPC3Q8TF64 312 aa12.55□□□□□ -0.4
ATG4B-224ENST00000494132 SNX18Q96RF0 628 aa12.55□□□□□ -0.4
ATG4B-224ENST00000494132 SOX7Q9BT81 388 aa12.55□□□□□ -0.4
ATG4B-224ENST00000494132 DGCR6LQ9BY27 220 aa12.55□□□□□ -0.4
ATG4B-224ENST00000494132 SLCO1C1Q9NYB5 712 aa12.55□□□□□ -0.4
ATG4B-224ENST00000494132 NIPBLQ6KC79 2804 aaeCLIP12.54□□□□□ -0.4
ATG4B-224ENST00000494132 OR6C6A6NF89 314 aa12.54□□□□□ -0.4
ATG4B-224ENST00000494132 ZSCAN5BA6NJL1 495 aa12.54□□□□□ -0.4
ATG4B-224ENST00000494132 TPD52L2O43399 206 aaKnown RBP12.54□□□□□ -0.4
ATG4B-224ENST00000494132 SPRY3O43610 288 aa12.54□□□□□ -0.4
ATG4B-224ENST00000494132 IDH3BO43837 385 aa12.54□□□□□ -0.4
ATG4B-224ENST00000494132 FKBP6O75344 327 aa12.54□□□□□ -0.4
ATG4B-224ENST00000494132 IGHV3-13P01766 116 aa12.54□□□□□ -0.4
ATG4B-224ENST00000494132 CLUP10909 449 aa12.54□□□□□ -0.4
ATG4B-224ENST00000494132 PSKH1P11801 424 aa12.54□□□□□ -0.4
ATG4B-224ENST00000494132 RBMXP38159 391 aaKnown RBP12.54□□□□□ -0.4
ATG4B-224ENST00000494132 CBX1P83916 185 aa12.54□□□□□ -0.4
ATG4B-224ENST00000494132 CRMP1Q14194 572 aa12.54□□□□□ -0.4
ATG4B-224ENST00000494132 KCNMB1Q16558 191 aa12.54□□□□□ -0.4
ATG4B-224ENST00000494132 SLC36A3Q495N2 470 aa12.54□□□□□ -0.4
ATG4B-224ENST00000494132 ZNF362Q5T0B9 420 aaPredicted RBP12.54□□□□□ -0.4
ATG4B-224ENST00000494132 C6orf52Q5T4I8 152 aa12.54□□□□□ -0.4
ATG4B-224ENST00000494132 CFAP77Q6ZQR2 320 aa12.54□□□□□ -0.4
ATG4B-224ENST00000494132 ZBTB46Q86UZ6 589 aa12.54□□□□□ -0.4
ATG4B-224ENST00000494132 SLC37A3Q8NCC5 494 aa12.54□□□□□ -0.4
ATG4B-224ENST00000494132 PROKR2Q8NFJ6 384 aa12.54□□□□□ -0.4
ATG4B-224ENST00000494132 FEVQ99581 238 aa12.54□□□□□ -0.4
ATG4B-224ENST00000494132 WACQ9BTA9 647 aa12.54□□□□□ -0.4
ATG4B-224ENST00000494132 ELOVL3Q9HB03 270 aa12.54□□□□□ -0.4
ATG4B-224ENST00000494132 ZNF275Q9NSD4 429 aaPredicted RBP12.54□□□□□ -0.4
ATG4B-224ENST00000494132 MRPL22Q9NWU5 206 aaKnown RBP12.54□□□□□ -0.4
ATG4B-224ENST00000494132 PDP1Q9P0J1 537 aaPredicted RBP12.54□□□□□ -0.4
ATG4B-224ENST00000494132 JMJD1CQ15652 2540 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 TCRBV3S1A0A5B6 114 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 A8MV72 311 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-224ENST00000494132 H3BN98 237 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 TIMM8AO60220 97 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-224ENST00000494132 LILRA1O75019 489 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 E2F6O75461 281 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 COX5BP10606 129 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 GSTM3P21266 225 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 PRKACGP22612 351 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 GIFP27352 417 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 ZNF81P51508 661 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 MMP15P51511 669 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 ARHGDIAP52565 204 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 PRSS12P56730 875 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 RIN1Q13671 783 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 CCNIQ14094 377 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 SPRNQ5BIV9 151 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 MBNL2Q5VZF2 373 aaKnown RBP12.53□□□□□ -0.4
ATG4B-224ENST00000494132 SLC18B1Q6NT16 456 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 UNQ6126/PRO20091Q6UXV3 157 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 LNX2Q8N448 690 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 RDH5Q92781 318 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 SLCO4A1Q96BD0 722 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 DDOQ99489 341 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 CDADC1Q9BWV3 514 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 CHODLQ9H9P2 273 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 MSL2Q9HCI7 577 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 TREM2Q9NZC2 230 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 PTTG3PQ9NZH4 202 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 GPR160Q9UJ42 338 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 STARD10Q9Y365 291 aa12.53□□□□□ -0.4
ATG4B-224ENST00000494132 CACNG2Q9Y698 323 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms